Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Gm22469-201ENSMUST00000104118 133 ntBASIC0.73□□□□□ -2.29
Trim43aQ3TL54 Gm11522-201ENSMUST00000120533 176 ntBASIC0.73□□□□□ -2.29
Trim43aQ3TL54 n-R5s188-201ENSMUST00000122646 105 ntBASIC0.73□□□□□ -2.29
Trim43aQ3TL54 Gm43220-201ENSMUST00000199299 282 ntBASIC0.73□□□□□ -2.29
Trim43aQ3TL54 Gm45704-201ENSMUST00000212582 403 ntBASIC0.73□□□□□ -2.29
Trim43aQ3TL54 AC163033.1-201ENSMUST00000218608 157 ntBASIC0.73□□□□□ -2.29
Trim43aQ3TL54 AC098718.1-201ENSMUST00000226166 175 ntBASIC0.73□□□□□ -2.29
Trim43aQ3TL54 Gm24966-201ENSMUST00000082443 79 ntBASIC0.73□□□□□ -2.29
Trim43aQ3TL54 Gm23055-201ENSMUST00000082805 94 ntBASIC0.73□□□□□ -2.29
Trim43aQ3TL54 Gm23347-201ENSMUST00000083823 82 ntBASIC0.73□□□□□ -2.29
Trim43aQ3TL54 Gm15102-201ENSMUST00000118740 1502 ntBASIC0.73□□□□□ -2.29
Trim43aQ3TL54 Gm15101-201ENSMUST00000178818 1502 ntBASIC0.73□□□□□ -2.29
Trim43aQ3TL54 Gm22945-201ENSMUST00000158557 157 ntBASIC0.72□□□□□ -2.29
Trim43aQ3TL54 Gm20462-201ENSMUST00000172623 408 ntBASIC0.72□□□□□ -2.29
Trim43aQ3TL54 Sprr2c-ps-201ENSMUST00000195581 301 ntBASIC0.72□□□□□ -2.29
Trim43aQ3TL54 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC0.72□□□□□ -2.29
Trim43aQ3TL54 Gm45119-201ENSMUST00000207612 199 ntBASIC0.72□□□□□ -2.29
Trim43aQ3TL54 Olfr1435-ps1-201ENSMUST00000207773 249 ntBASIC0.72□□□□□ -2.29
Trim43aQ3TL54 Gm24037-201ENSMUST00000082871 180 ntBASIC0.72□□□□□ -2.29
Trim43aQ3TL54 1110057P08Rik-201ENSMUST00000089097 465 ntAPPRIS P1 BASIC0.72□□□□□ -2.29
Trim43aQ3TL54 Olfr1154-202ENSMUST00000215017 2917 ntAPPRIS P1 TSL 5 BASIC0.71□□□□□ -2.29
Trim43aQ3TL54 Gm10033-201ENSMUST00000072427 1813 ntBASIC0.71□□□□□ -2.3
Trim43aQ3TL54 Gm12225-201ENSMUST00000117995 298 ntBASIC0.71□□□□□ -2.3
Trim43aQ3TL54 Gm11859-201ENSMUST00000118099 455 ntBASIC0.71□□□□□ -2.3
Trim43aQ3TL54 Gm24393-201ENSMUST00000158135 97 ntBASIC0.71□□□□□ -2.3
Trim43aQ3TL54 Gm22447-201ENSMUST00000158155 92 ntBASIC0.71□□□□□ -2.3
Trim43aQ3TL54 Gm21518-201ENSMUST00000178115 567 ntTSL 5 BASIC0.71□□□□□ -2.3
Trim43aQ3TL54 Gm20736-201ENSMUST00000178198 567 ntTSL 5 BASIC0.71□□□□□ -2.3
Trim43aQ3TL54 Gm20843-201ENSMUST00000178505 567 ntTSL 5 BASIC0.71□□□□□ -2.3
Trim43aQ3TL54 Gm21209-201ENSMUST00000178556 567 ntTSL 5 BASIC0.71□□□□□ -2.3
Trim43aQ3TL54 Gm21258-201ENSMUST00000178673 567 ntTSL 5 BASIC0.71□□□□□ -2.3
Trim43aQ3TL54 Gm20888-201ENSMUST00000178934 567 ntTSL 5 BASIC0.71□□□□□ -2.3
Trim43aQ3TL54 Gm21650-201ENSMUST00000179073 567 ntTSL 5 BASIC0.71□□□□□ -2.3
Trim43aQ3TL54 Gm20937-201ENSMUST00000180329 567 ntTSL 5 BASIC0.71□□□□□ -2.3
Trim43aQ3TL54 Gm26968-201ENSMUST00000182894 481 ntBASIC0.71□□□□□ -2.3
Trim43aQ3TL54 Gm28661-201ENSMUST00000188231 681 ntBASIC0.71□□□□□ -2.3
Trim43aQ3TL54 Gm29022-201ENSMUST00000190702 225 ntBASIC0.71□□□□□ -2.3
Trim43aQ3TL54 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC0.71□□□□□ -2.3
Trim43aQ3TL54 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC0.71□□□□□ -2.3
Trim43aQ3TL54 Gm23627-201ENSMUST00000082459 107 ntBASIC0.71□□□□□ -2.3
Trim43aQ3TL54 Gm22502-201ENSMUST00000082488 107 ntBASIC0.71□□□□□ -2.3
Trim43aQ3TL54 Gm22977-201ENSMUST00000082615 107 ntBASIC0.71□□□□□ -2.3
Trim43aQ3TL54 Gm24149-201ENSMUST00000082757 107 ntBASIC0.71□□□□□ -2.3
Trim43aQ3TL54 Gm25851-201ENSMUST00000082794 107 ntBASIC0.71□□□□□ -2.3
Trim43aQ3TL54 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC0.71□□□□□ -2.3
Trim43aQ3TL54 Gm25416-201ENSMUST00000104221 107 ntBASIC0.7□□□□□ -2.3
Trim43aQ3TL54 Gm22545-201ENSMUST00000104350 132 ntBASIC0.7□□□□□ -2.3
Trim43aQ3TL54 Gm14980-201ENSMUST00000121247 736 ntBASIC0.7□□□□□ -2.3
Trim43aQ3TL54 Gm11334-201ENSMUST00000121969 156 ntBASIC0.7□□□□□ -2.3
Trim43aQ3TL54 Gm16358-201ENSMUST00000146046 210 ntBASIC0.7□□□□□ -2.3
Trim43aQ3TL54 Gm25011-201ENSMUST00000158398 126 ntBASIC0.7□□□□□ -2.3
Trim43aQ3TL54 Mir3471-1-201ENSMUST00000175139 131 ntBASIC0.7□□□□□ -2.3
Trim43aQ3TL54 Gm24323-201ENSMUST00000175342 77 ntBASIC0.7□□□□□ -2.3
Trim43aQ3TL54 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC0.7□□□□□ -2.3
Trim43aQ3TL54 Gm23660-201ENSMUST00000178362 79 ntBASIC0.7□□□□□ -2.3
Trim43aQ3TL54 Gm24088-201ENSMUST00000179100 79 ntBASIC0.7□□□□□ -2.3
Trim43aQ3TL54 Gm27545-201ENSMUST00000184755 202 ntBASIC0.7□□□□□ -2.3
Trim43aQ3TL54 Gm28585-201ENSMUST00000187587 442 ntTSL 5 BASIC0.7□□□□□ -2.3
Trim43aQ3TL54 Gm18291-201ENSMUST00000190791 301 ntBASIC0.7□□□□□ -2.3
Trim43aQ3TL54 Gm44325-201ENSMUST00000196757 77 ntBASIC0.7□□□□□ -2.3
Trim43aQ3TL54 Olfr454-ps1-201ENSMUST00000205206 348 ntBASIC0.7□□□□□ -2.3
Trim43aQ3TL54 AC126554.1-201ENSMUST00000222161 271 ntBASIC0.7□□□□□ -2.3
Trim43aQ3TL54 Gm43877-201ENSMUST00000205029 2238 ntBASIC0.69□□□□□ -2.3
Trim43aQ3TL54 Olfr1100-202ENSMUST00000117211 2937 ntAPPRIS P1 TSL 5 BASIC0.69□□□□□ -2.3
Trim43aQ3TL54 Gm22199-201ENSMUST00000122660 126 ntBASIC0.69□□□□□ -2.3
Trim43aQ3TL54 Gm25909-201ENSMUST00000157619 121 ntBASIC0.69□□□□□ -2.3
Trim43aQ3TL54 Gm24853-201ENSMUST00000158026 121 ntBASIC0.69□□□□□ -2.3
Trim43aQ3TL54 Gm22515-201ENSMUST00000158273 305 ntBASIC0.69□□□□□ -2.3
Trim43aQ3TL54 Gm23114-201ENSMUST00000158478 117 ntBASIC0.69□□□□□ -2.3
Trim43aQ3TL54 Cfap61-214ENSMUST00000167179 183 ntBASIC0.69□□□□□ -2.3
Trim43aQ3TL54 Gm23191-201ENSMUST00000179147 107 ntBASIC0.69□□□□□ -2.3
Trim43aQ3TL54 Gm44358-201ENSMUST00000196301 98 ntBASIC0.69□□□□□ -2.3
Trim43aQ3TL54 AC122905.2-201ENSMUST00000220325 269 ntBASIC0.69□□□□□ -2.3
Trim43aQ3TL54 AC154636.2-201ENSMUST00000222538 161 ntBASIC0.69□□□□□ -2.3
Trim43aQ3TL54 CT954323.1-201ENSMUST00000222774 229 ntBASIC0.69□□□□□ -2.3
Trim43aQ3TL54 AC104832.1-201ENSMUST00000222938 550 ntBASIC0.69□□□□□ -2.3
Trim43aQ3TL54 Gm25650-201ENSMUST00000083784 162 ntBASIC0.69□□□□□ -2.3
Trim43aQ3TL54 Gm3867-201ENSMUST00000086108 279 ntBASIC0.69□□□□□ -2.3
Trim43aQ3TL54 Gm23013-201ENSMUST00000104146 106 ntBASIC0.68□□□□□ -2.3
Trim43aQ3TL54 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC0.68□□□□□ -2.3
Trim43aQ3TL54 Gm12433-201ENSMUST00000119659 255 ntBASIC0.68□□□□□ -2.3
Trim43aQ3TL54 4930511O05Rik-201ENSMUST00000155912 391 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
Trim43aQ3TL54 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC0.68□□□□□ -2.3
Trim43aQ3TL54 Gm16404-201ENSMUST00000177739 468 ntBASIC0.68□□□□□ -2.3
Trim43aQ3TL54 Gm7958-201ENSMUST00000178255 468 ntBASIC0.68□□□□□ -2.3
Trim43aQ3TL54 Gm7950-201ENSMUST00000179633 468 ntBASIC0.68□□□□□ -2.3
Trim43aQ3TL54 Gm14598-201ENSMUST00000180109 468 ntBASIC0.68□□□□□ -2.3
Trim43aQ3TL54 Gm14625-201ENSMUST00000180231 468 ntBASIC0.68□□□□□ -2.3
Trim43aQ3TL54 Gm25284-201ENSMUST00000180345 141 ntBASIC0.68□□□□□ -2.3
Trim43aQ3TL54 Gm27974-201ENSMUST00000183415 105 ntBASIC0.68□□□□□ -2.3
Trim43aQ3TL54 Gm37713-201ENSMUST00000191746 198 ntBASIC0.68□□□□□ -2.3
Trim43aQ3TL54 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
Trim43aQ3TL54 Mir362-201ENSMUST00000093592 65 ntBASIC0.68□□□□□ -2.3
Trim43aQ3TL54 Gm24163-201ENSMUST00000093660 132 ntBASIC0.68□□□□□ -2.3
Trim43aQ3TL54 Vmn1r-ps116-201ENSMUST00000121544 292 ntBASIC0.67□□□□□ -2.3
Trim43aQ3TL54 Gm24747-201ENSMUST00000157835 87 ntBASIC0.67□□□□□ -2.3
Trim43aQ3TL54 Gm22802-201ENSMUST00000175621 89 ntBASIC0.67□□□□□ -2.3
Trim43aQ3TL54 Gm43898-201ENSMUST00000204456 424 ntBASIC0.67□□□□□ -2.3
Trim43aQ3TL54 Gm24271-201ENSMUST00000102327 111 ntBASIC0.66□□□□□ -2.3
Trim43aQ3TL54 Gm25787-201ENSMUST00000104709 92 ntBASIC0.66□□□□□ -2.3
Retrieved 100 of 76,532 protein–RNA pairs in 232.1 ms