Protein–RNA interactions for Protein: Q3TIX9

Usp39, U4/U6.U5 tri-snRNP-associated protein 2, mousemouse

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp39Q3TIX9 Gm25528-201ENSMUST00000180264 132 ntBASIC2.53□□□□□ -2
Usp39Q3TIX9 Gm43602-201ENSMUST00000196772 300 ntBASIC2.53□□□□□ -2
Usp39Q3TIX9 AC154296.1-201ENSMUST00000198150 67 ntBASIC2.53□□□□□ -2
Usp39Q3TIX9 Mir9-1-201ENSMUST00000199907 89 ntBASIC2.53□□□□□ -2
Usp39Q3TIX9 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC2.53□□□□□ -2
Usp39Q3TIX9 Gm18346-201ENSMUST00000216782 325 ntBASIC2.53□□□□□ -2
Usp39Q3TIX9 Gm23303-201ENSMUST00000082714 152 ntBASIC2.53□□□□□ -2
Usp39Q3TIX9 Zfp988-201ENSMUST00000148762 2800 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Usp39Q3TIX9 Olfr1044-202ENSMUST00000215171 3266 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Usp39Q3TIX9 Olfr166-203ENSMUST00000216465 4371 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Usp39Q3TIX9 Gm23772-201ENSMUST00000104433 102 ntBASIC2.52□□□□□ -2.01
Usp39Q3TIX9 Gm14626-201ENSMUST00000117619 216 ntBASIC2.52□□□□□ -2.01
Usp39Q3TIX9 Gm23080-201ENSMUST00000157846 103 ntBASIC2.52□□□□□ -2.01
Usp39Q3TIX9 Gm23644-201ENSMUST00000157856 77 ntBASIC2.52□□□□□ -2.01
Usp39Q3TIX9 Gm25707-201ENSMUST00000175120 96 ntBASIC2.52□□□□□ -2.01
Usp39Q3TIX9 Gm22800-201ENSMUST00000175627 94 ntBASIC2.52□□□□□ -2.01
Usp39Q3TIX9 Gm25253-201ENSMUST00000179958 107 ntBASIC2.52□□□□□ -2.01
Usp39Q3TIX9 Gm44320-201ENSMUST00000199276 86 ntBASIC2.52□□□□□ -2.01
Usp39Q3TIX9 Gm25797-201ENSMUST00000082640 107 ntBASIC2.52□□□□□ -2.01
Usp39Q3TIX9 Gm22509-201ENSMUST00000082775 107 ntBASIC2.52□□□□□ -2.01
Usp39Q3TIX9 Gm23723-201ENSMUST00000082996 132 ntBASIC2.52□□□□□ -2.01
Usp39Q3TIX9 Mir125b-2-201ENSMUST00000083538 71 ntBASIC2.52□□□□□ -2.01
Usp39Q3TIX9 Gm25409-201ENSMUST00000083764 131 ntBASIC2.52□□□□□ -2.01
Usp39Q3TIX9 Snord7-201ENSMUST00000083781 97 ntBASIC2.52□□□□□ -2.01
Usp39Q3TIX9 Gm10217-201ENSMUST00000088080 135 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Usp39Q3TIX9 Il1rapl1-202ENSMUST00000113964 1936 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Usp39Q3TIX9 Olfr1477-202ENSMUST00000217001 4000 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
Usp39Q3TIX9 Gm44114-201ENSMUST00000203270 2727 ntBASIC2.51□□□□□ -2.01
Usp39Q3TIX9 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Usp39Q3TIX9 Gm13913-201ENSMUST00000121126 260 ntBASIC2.51□□□□□ -2.01
Usp39Q3TIX9 Gm22213-201ENSMUST00000157564 119 ntBASIC2.51□□□□□ -2.01
Usp39Q3TIX9 Gm26411-201ENSMUST00000157668 107 ntBASIC2.51□□□□□ -2.01
Usp39Q3TIX9 Gm22382-201ENSMUST00000158185 130 ntBASIC2.51□□□□□ -2.01
Usp39Q3TIX9 Gm22612-201ENSMUST00000158293 101 ntBASIC2.51□□□□□ -2.01
Usp39Q3TIX9 Gm25012-201ENSMUST00000158396 164 ntBASIC2.51□□□□□ -2.01
Usp39Q3TIX9 Gm22664-201ENSMUST00000158719 105 ntBASIC2.51□□□□□ -2.01
Usp39Q3TIX9 Gm22527-201ENSMUST00000158816 106 ntBASIC2.51□□□□□ -2.01
Usp39Q3TIX9 Gm20718-201ENSMUST00000176058 259 ntBASIC2.51□□□□□ -2.01
Usp39Q3TIX9 Gm23933-201ENSMUST00000178405 79 ntBASIC2.51□□□□□ -2.01
Usp39Q3TIX9 Mir7013-201ENSMUST00000183540 72 ntBASIC2.51□□□□□ -2.01
Usp39Q3TIX9 Gm28409-201ENSMUST00000187064 103 ntBASIC2.51□□□□□ -2.01
Usp39Q3TIX9 Gm38311-201ENSMUST00000192945 165 ntBASIC2.51□□□□□ -2.01
Usp39Q3TIX9 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC2.51□□□□□ -2.01
Usp39Q3TIX9 Gm22576-201ENSMUST00000083733 104 ntBASIC2.51□□□□□ -2.01
Usp39Q3TIX9 Gm24030-201ENSMUST00000083931 164 ntBASIC2.51□□□□□ -2.01
Usp39Q3TIX9 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC2.51□□□□□ -2.01
Usp39Q3TIX9 Vmn2r72-201ENSMUST00000063425 2571 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Usp39Q3TIX9 Gm25377-201ENSMUST00000104334 129 ntBASIC2.5□□□□□ -2.01
Usp39Q3TIX9 Gm26247-201ENSMUST00000116702 91 ntBASIC2.5□□□□□ -2.01
Usp39Q3TIX9 Gm24291-201ENSMUST00000157633 162 ntBASIC2.5□□□□□ -2.01
Usp39Q3TIX9 Gm24436-201ENSMUST00000157889 302 ntBASIC2.5□□□□□ -2.01
Usp39Q3TIX9 Gm26360-201ENSMUST00000158872 103 ntBASIC2.5□□□□□ -2.01
Usp39Q3TIX9 Mir28b-201ENSMUST00000175399 80 ntBASIC2.5□□□□□ -2.01
Usp39Q3TIX9 Gm37807-201ENSMUST00000194310 190 ntBASIC2.5□□□□□ -2.01
Usp39Q3TIX9 AC155839.1-201ENSMUST00000200105 147 ntBASIC2.5□□□□□ -2.01
Usp39Q3TIX9 AC183096.2-201ENSMUST00000228733 457 ntBASIC2.5□□□□□ -2.01
Usp39Q3TIX9 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
Usp39Q3TIX9 Gm43877-201ENSMUST00000205029 2238 ntBASIC2.5□□□□□ -2.01
Usp39Q3TIX9 Gm15314-201ENSMUST00000120740 1887 ntBASIC2.5□□□□□ -2.01
Usp39Q3TIX9 Olfr830-202ENSMUST00000212723 3105 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
Usp39Q3TIX9 Gm24280-201ENSMUST00000104237 134 ntBASIC2.49□□□□□ -2.01
Usp39Q3TIX9 Gm22105-201ENSMUST00000116734 116 ntBASIC2.49□□□□□ -2.01
Usp39Q3TIX9 Gm24595-201ENSMUST00000122501 110 ntBASIC2.49□□□□□ -2.01
Usp39Q3TIX9 Gm23599-201ENSMUST00000157261 251 ntBASIC2.49□□□□□ -2.01
Usp39Q3TIX9 Gm28647-201ENSMUST00000188416 197 ntBASIC2.49□□□□□ -2.01
Usp39Q3TIX9 Mir7657-201ENSMUST00000196051 57 ntBASIC2.49□□□□□ -2.01
Usp39Q3TIX9 Gm44555-201ENSMUST00000209008 148 ntBASIC2.49□□□□□ -2.01
Usp39Q3TIX9 AC158597.1-201ENSMUST00000216234 150 ntBASIC2.49□□□□□ -2.01
Usp39Q3TIX9 Gm23445-201ENSMUST00000082800 107 ntBASIC2.49□□□□□ -2.01
Usp39Q3TIX9 Gm22686-201ENSMUST00000082847 100 ntBASIC2.49□□□□□ -2.01
Usp39Q3TIX9 Gm22622-201ENSMUST00000082870 129 ntBASIC2.49□□□□□ -2.01
Usp39Q3TIX9 Gm25199-201ENSMUST00000083095 104 ntBASIC2.49□□□□□ -2.01
Usp39Q3TIX9 Snord61-201ENSMUST00000083176 71 ntBASIC2.49□□□□□ -2.01
Usp39Q3TIX9 Mir218-1-201ENSMUST00000083669 110 ntBASIC2.49□□□□□ -2.01
Usp39Q3TIX9 AC117199.1-201ENSMUST00000219940 3132 ntBASIC2.49□□□□□ -2.01
Usp39Q3TIX9 Olfr1206-202ENSMUST00000216950 3303 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Usp39Q3TIX9 Olfr835-202ENSMUST00000213018 2690 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Usp39Q3TIX9 Gm15067-201ENSMUST00000119534 156 ntBASIC2.48□□□□□ -2.01
Usp39Q3TIX9 Gm13560-201ENSMUST00000121865 329 ntBASIC2.48□□□□□ -2.01
Usp39Q3TIX9 Gm25882-201ENSMUST00000157784 85 ntBASIC2.48□□□□□ -2.01
Usp39Q3TIX9 Gm27582-201ENSMUST00000184084 126 ntBASIC2.48□□□□□ -2.01
Usp39Q3TIX9 Gm29604-201ENSMUST00000187176 163 ntBASIC2.48□□□□□ -2.01
Usp39Q3TIX9 Gm6060-201ENSMUST00000188671 251 ntBASIC2.48□□□□□ -2.01
Usp39Q3TIX9 Igkv2-93-1-201ENSMUST00000196774 272 ntBASIC2.48□□□□□ -2.01
Usp39Q3TIX9 Gm42844-201ENSMUST00000200355 112 ntBASIC2.48□□□□□ -2.01
Usp39Q3TIX9 mt-Tt-201ENSMUST00000082422 67 ntBASIC2.48□□□□□ -2.01
Usp39Q3TIX9 Gm26265-201ENSMUST00000083277 135 ntBASIC2.48□□□□□ -2.01
Usp39Q3TIX9 Gm23247-201ENSMUST00000083373 107 ntBASIC2.48□□□□□ -2.01
Usp39Q3TIX9 Mir340-201ENSMUST00000083483 98 ntBASIC2.48□□□□□ -2.01
Usp39Q3TIX9 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
Usp39Q3TIX9 Gm37566-201ENSMUST00000192363 4355 ntBASIC2.48□□□□□ -2.01
Usp39Q3TIX9 Olfr611-202ENSMUST00000216074 2301 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
Usp39Q3TIX9 Rex2-201ENSMUST00000075775 3993 ntAPPRIS P1 TSL 2 BASIC2.47□□□□□ -2.01
Usp39Q3TIX9 Gm24232-201ENSMUST00000104314 132 ntBASIC2.47□□□□□ -2.01
Usp39Q3TIX9 Gm23718-201ENSMUST00000157350 307 ntBASIC2.47□□□□□ -2.01
Usp39Q3TIX9 Gm24480-201ENSMUST00000157442 103 ntBASIC2.47□□□□□ -2.01
Usp39Q3TIX9 Mir3075-201ENSMUST00000175340 85 ntBASIC2.47□□□□□ -2.01
Usp39Q3TIX9 Gm23190-201ENSMUST00000180307 64 ntBASIC2.47□□□□□ -2.01
Usp39Q3TIX9 Gm21064-202ENSMUST00000190583 278 ntBASIC2.47□□□□□ -2.01
Usp39Q3TIX9 Gm37116-201ENSMUST00000195161 147 ntBASIC2.47□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 120.5 ms