Protein–RNA interactions for Protein: Q05895

Thbs3, Thrombospondin-3, mousemouse

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs3Q05895 Ppp1r3a-201ENSMUST00000045096 6965 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
Thbs3Q05895 Gm25529-201ENSMUST00000104850 92 ntBASIC1.89□□□□□ -2.11
Thbs3Q05895 Gm2830-201ENSMUST00000140330 385 ntBASIC1.89□□□□□ -2.11
Thbs3Q05895 Gm25012-201ENSMUST00000158396 164 ntBASIC1.89□□□□□ -2.11
Thbs3Q05895 Gm26022-201ENSMUST00000158663 108 ntBASIC1.89□□□□□ -2.11
Thbs3Q05895 Gm22139-201ENSMUST00000158747 105 ntBASIC1.89□□□□□ -2.11
Thbs3Q05895 Gm27399-201ENSMUST00000184250 78 ntBASIC1.89□□□□□ -2.11
Thbs3Q05895 Gm28434-201ENSMUST00000187738 500 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Thbs3Q05895 Ttn-225ENSMUST00000190813 300 ntTSL 5 BASIC1.89□□□□□ -2.11
Thbs3Q05895 Gm42834-201ENSMUST00000196845 256 ntBASIC1.89□□□□□ -2.11
Thbs3Q05895 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC1.89□□□□□ -2.11
Thbs3Q05895 AC159632.1-201ENSMUST00000221808 317 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
Thbs3Q05895 Gm25204-201ENSMUST00000082843 106 ntBASIC1.89□□□□□ -2.11
Thbs3Q05895 Olfr606-202ENSMUST00000214631 2649 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Thbs3Q05895 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
Thbs3Q05895 Lrrc19-202ENSMUST00000107101 2820 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
Thbs3Q05895 Ifi214-203ENSMUST00000139092 2888 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
Thbs3Q05895 Olfr1177-ps-202ENSMUST00000216713 2821 ntAPPRIS P5 TSL 3 BASIC1.88□□□□□ -2.11
Thbs3Q05895 Gm43046-201ENSMUST00000198771 2451 ntBASIC1.88□□□□□ -2.11
Thbs3Q05895 Gm22148-201ENSMUST00000104445 107 ntBASIC1.88□□□□□ -2.11
Thbs3Q05895 Gm23469-201ENSMUST00000157131 104 ntBASIC1.88□□□□□ -2.11
Thbs3Q05895 Gm24010-201ENSMUST00000157731 282 ntBASIC1.88□□□□□ -2.11
Thbs3Q05895 Gm22349-201ENSMUST00000157864 107 ntBASIC1.88□□□□□ -2.11
Thbs3Q05895 Gm22159-201ENSMUST00000158412 130 ntBASIC1.88□□□□□ -2.11
Thbs3Q05895 Gm16546-201ENSMUST00000159442 355 ntBASIC1.88□□□□□ -2.11
Thbs3Q05895 Gm25707-201ENSMUST00000175120 96 ntBASIC1.88□□□□□ -2.11
Thbs3Q05895 Gm23813-201ENSMUST00000175153 77 ntBASIC1.88□□□□□ -2.11
Thbs3Q05895 Gm22800-201ENSMUST00000175627 94 ntBASIC1.88□□□□□ -2.11
Thbs3Q05895 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC1.88□□□□□ -2.11
Thbs3Q05895 Gm42988-201ENSMUST00000198116 225 ntBASIC1.88□□□□□ -2.11
Thbs3Q05895 Igkv1-108-201ENSMUST00000198926 298 ntBASIC1.88□□□□□ -2.11
Thbs3Q05895 Mir497-201ENSMUST00000200557 84 ntBASIC1.88□□□□□ -2.11
Thbs3Q05895 AC122465.2-201ENSMUST00000221774 354 ntBASIC1.88□□□□□ -2.11
Thbs3Q05895 Gm25589-201ENSMUST00000082502 166 ntBASIC1.88□□□□□ -2.11
Thbs3Q05895 Gm22299-201ENSMUST00000082663 136 ntBASIC1.88□□□□□ -2.11
Thbs3Q05895 Mir125b-2-201ENSMUST00000083538 71 ntBASIC1.88□□□□□ -2.11
Thbs3Q05895 Gm38255-201ENSMUST00000194910 2996 ntBASIC1.87□□□□□ -2.11
Thbs3Q05895 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC1.87□□□□□ -2.11
Thbs3Q05895 Gm12449-201ENSMUST00000117572 234 ntBASIC1.87□□□□□ -2.11
Thbs3Q05895 Atp5k-ps2-201ENSMUST00000120437 210 ntBASIC1.87□□□□□ -2.11
Thbs3Q05895 Gm12926-201ENSMUST00000121158 409 ntBASIC1.87□□□□□ -2.11
Thbs3Q05895 Gm11334-201ENSMUST00000121969 156 ntBASIC1.87□□□□□ -2.11
Thbs3Q05895 Gm15365-201ENSMUST00000122392 300 ntBASIC1.87□□□□□ -2.11
Thbs3Q05895 Gm22281-201ENSMUST00000157198 103 ntBASIC1.87□□□□□ -2.11
Thbs3Q05895 Gm26049-201ENSMUST00000157313 108 ntBASIC1.87□□□□□ -2.11
Thbs3Q05895 Gm25059-201ENSMUST00000157367 117 ntBASIC1.87□□□□□ -2.11
Thbs3Q05895 Gm23101-201ENSMUST00000157550 137 ntBASIC1.87□□□□□ -2.11
Thbs3Q05895 Gm24237-201ENSMUST00000157790 132 ntBASIC1.87□□□□□ -2.11
Thbs3Q05895 Gm22382-201ENSMUST00000158185 130 ntBASIC1.87□□□□□ -2.11
Thbs3Q05895 Gm26405-201ENSMUST00000158495 100 ntBASIC1.87□□□□□ -2.11
Thbs3Q05895 Mir1966-201ENSMUST00000158807 108 ntBASIC1.87□□□□□ -2.11
Thbs3Q05895 Gm17161-201ENSMUST00000169187 524 ntBASIC1.87□□□□□ -2.11
Thbs3Q05895 Gm24304-201ENSMUST00000177635 107 ntBASIC1.87□□□□□ -2.11
Thbs3Q05895 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
Thbs3Q05895 Gm37146-201ENSMUST00000192572 463 ntTSL 3 BASIC1.87□□□□□ -2.11
Thbs3Q05895 Gm44477-201ENSMUST00000199661 110 ntBASIC1.87□□□□□ -2.11
Thbs3Q05895 Gm18502-201ENSMUST00000218679 199 ntBASIC1.87□□□□□ -2.11
Thbs3Q05895 AC133517.1-203ENSMUST00000225570 390 ntBASIC1.87□□□□□ -2.11
Thbs3Q05895 Gm24148-201ENSMUST00000082762 80 ntBASIC1.87□□□□□ -2.11
Thbs3Q05895 Gm23722-201ENSMUST00000083002 130 ntBASIC1.87□□□□□ -2.11
Thbs3Q05895 Gm25136-201ENSMUST00000083253 115 ntBASIC1.87□□□□□ -2.11
Thbs3Q05895 Mir30d-201ENSMUST00000083503 82 ntBASIC1.87□□□□□ -2.11
Thbs3Q05895 Vmn1r185-204ENSMUST00000227411 4928 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
Thbs3Q05895 Olfr201-202ENSMUST00000216834 3706 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
Thbs3Q05895 AC132221.1-201ENSMUST00000220577 3841 ntBASIC1.86□□□□□ -2.11
Thbs3Q05895 Gm42862-201ENSMUST00000197494 2621 ntBASIC1.86□□□□□ -2.11
Thbs3Q05895 Gm26135-201ENSMUST00000101993 72 ntBASIC1.86□□□□□ -2.11
Thbs3Q05895 Mir466b-3-201ENSMUST00000103806 81 ntBASIC1.86□□□□□ -2.11
Thbs3Q05895 Gm25094-201ENSMUST00000103992 131 ntBASIC1.86□□□□□ -2.11
Thbs3Q05895 Gm24126-201ENSMUST00000104111 106 ntBASIC1.86□□□□□ -2.11
Thbs3Q05895 Gm26342-201ENSMUST00000104557 129 ntBASIC1.86□□□□□ -2.11
Thbs3Q05895 Mir1298-201ENSMUST00000116681 98 ntBASIC1.86□□□□□ -2.11
Thbs3Q05895 Gm22193-201ENSMUST00000116868 76 ntBASIC1.86□□□□□ -2.11
Thbs3Q05895 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC1.86□□□□□ -2.11
Thbs3Q05895 Gm22557-201ENSMUST00000157804 102 ntBASIC1.86□□□□□ -2.11
Thbs3Q05895 Mir5118-201ENSMUST00000175551 67 ntBASIC1.86□□□□□ -2.11
Thbs3Q05895 Snord50b-201ENSMUST00000178497 72 ntBASIC1.86□□□□□ -2.11
Thbs3Q05895 Mir7118-201ENSMUST00000197760 61 ntBASIC1.86□□□□□ -2.11
Thbs3Q05895 Gm43199-201ENSMUST00000200019 307 ntBASIC1.86□□□□□ -2.11
Thbs3Q05895 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC1.86□□□□□ -2.11
Thbs3Q05895 Gm25142-201ENSMUST00000082698 107 ntBASIC1.86□□□□□ -2.11
Thbs3Q05895 Mir124a-3-201ENSMUST00000083520 68 ntBASIC1.86□□□□□ -2.11
Thbs3Q05895 Gm23040-201ENSMUST00000083869 163 ntBASIC1.86□□□□□ -2.11
Thbs3Q05895 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC1.86□□□□□ -2.11
Thbs3Q05895 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC1.85□□□□□ -2.11
Thbs3Q05895 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
Thbs3Q05895 Gm24276-201ENSMUST00000102181 110 ntBASIC1.85□□□□□ -2.11
Thbs3Q05895 Gm13922-201ENSMUST00000119505 156 ntBASIC1.85□□□□□ -2.11
Thbs3Q05895 Gm25961-201ENSMUST00000157174 135 ntBASIC1.85□□□□□ -2.11
Thbs3Q05895 Gm23230-201ENSMUST00000157298 133 ntBASIC1.85□□□□□ -2.11
Thbs3Q05895 Gm22553-201ENSMUST00000157797 295 ntBASIC1.85□□□□□ -2.11
Thbs3Q05895 Mir1951-201ENSMUST00000157981 89 ntBASIC1.85□□□□□ -2.11
Thbs3Q05895 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC1.85□□□□□ -2.11
Thbs3Q05895 Trav5n-3-201ENSMUST00000164511 270 ntBASIC1.85□□□□□ -2.11
Thbs3Q05895 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Thbs3Q05895 Gm21798-201ENSMUST00000180105 261 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Thbs3Q05895 Gm29603-201ENSMUST00000186792 334 ntBASIC1.85□□□□□ -2.11
Thbs3Q05895 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
Thbs3Q05895 Gm44338-201ENSMUST00000198614 110 ntBASIC1.85□□□□□ -2.11
Thbs3Q05895 Gm44459-201ENSMUST00000203926 160 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 97.4 ms