Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Mir103-2-201ENSMUST00000083629 86 ntBASIC2.57□□□□□ -2
Col8a1Q00780 Olfr1208-202ENSMUST00000214121 2823 ntAPPRIS P1 TSL 3 BASIC2.57□□□□□ -2
Col8a1Q00780 CT025538.3-201ENSMUST00000225279 3848 ntBASIC2.57□□□□□ -2
Col8a1Q00780 Olfr1129-203ENSMUST00000214773 2403 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Col8a1Q00780 Vmn2r72-201ENSMUST00000063425 2571 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Col8a1Q00780 Gm37063-201ENSMUST00000194678 3520 ntBASIC2.56□□□□□ -2
Col8a1Q00780 Olfr1270-204ENSMUST00000215975 4854 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Col8a1Q00780 Gm18751-201ENSMUST00000185777 2013 ntBASIC2.56□□□□□ -2
Col8a1Q00780 Scai-201ENSMUST00000038874 10709 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Col8a1Q00780 Gm23766-201ENSMUST00000103894 80 ntBASIC2.56□□□□□ -2
Col8a1Q00780 Gm24890-201ENSMUST00000104389 102 ntBASIC2.56□□□□□ -2
Col8a1Q00780 Gm22382-201ENSMUST00000158185 130 ntBASIC2.56□□□□□ -2
Col8a1Q00780 Gm25528-201ENSMUST00000180264 132 ntBASIC2.56□□□□□ -2
Col8a1Q00780 Gm37377-201ENSMUST00000191733 304 ntBASIC2.56□□□□□ -2
Col8a1Q00780 CT033785.1-201ENSMUST00000224872 272 ntBASIC2.56□□□□□ -2
Col8a1Q00780 AC027184.1-201ENSMUST00000226991 424 ntBASIC2.56□□□□□ -2
Col8a1Q00780 Olfr772-202ENSMUST00000214672 2955 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Col8a1Q00780 Olfr201-202ENSMUST00000216834 3706 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Col8a1Q00780 Gm38211-201ENSMUST00000192814 7217 ntBASIC2.55□□□□□ -2
Col8a1Q00780 Mir693-201ENSMUST00000102187 89 ntBASIC2.55□□□□□ -2
Col8a1Q00780 Gm23652-201ENSMUST00000116752 107 ntBASIC2.55□□□□□ -2
Col8a1Q00780 Gm14400-201ENSMUST00000117234 2135 ntBASIC2.55□□□□□ -2
Col8a1Q00780 Gm25045-201ENSMUST00000122670 99 ntBASIC2.55□□□□□ -2
Col8a1Q00780 Gm25544-201ENSMUST00000122676 120 ntBASIC2.55□□□□□ -2
Col8a1Q00780 Olfr389-202ENSMUST00000124927 2781 ntAPPRIS P1 TSL 3 BASIC2.55□□□□□ -2
Col8a1Q00780 Gm22227-201ENSMUST00000157356 259 ntBASIC2.55□□□□□ -2
Col8a1Q00780 Gm24922-201ENSMUST00000158511 102 ntBASIC2.55□□□□□ -2
Col8a1Q00780 Gm24277-201ENSMUST00000158661 104 ntBASIC2.55□□□□□ -2
Col8a1Q00780 Gm16584-201ENSMUST00000159267 189 ntBASIC2.55□□□□□ -2
Col8a1Q00780 Gm22800-201ENSMUST00000175627 94 ntBASIC2.55□□□□□ -2
Col8a1Q00780 Gm22510-201ENSMUST00000179304 79 ntBASIC2.55□□□□□ -2
Col8a1Q00780 Gm26336-201ENSMUST00000179449 79 ntBASIC2.55□□□□□ -2
Col8a1Q00780 Gm26390-201ENSMUST00000179628 79 ntBASIC2.55□□□□□ -2
Col8a1Q00780 Snhg14-203ENSMUST00000185815 670 ntTSL 5 BASIC2.55□□□□□ -2
Col8a1Q00780 Gm29602-201ENSMUST00000186887 442 ntBASIC2.55□□□□□ -2
Col8a1Q00780 Gm28912-201ENSMUST00000189001 234 ntBASIC2.55□□□□□ -2
Col8a1Q00780 Sult1c2-ps2-201ENSMUST00000196414 276 ntBASIC2.55□□□□□ -2
Col8a1Q00780 Gm43562-201ENSMUST00000196439 238 ntTSL 3 BASIC2.55□□□□□ -2
Col8a1Q00780 Gm25820-202ENSMUST00000197479 128 ntBASIC2.55□□□□□ -2
Col8a1Q00780 Olfr1319-ps1-201ENSMUST00000208550 274 ntBASIC2.55□□□□□ -2
Col8a1Q00780 Olfr1025-ps1-202ENSMUST00000213474 3578 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Col8a1Q00780 CT009696.1-201ENSMUST00000215745 256 ntBASIC2.55□□□□□ -2
Col8a1Q00780 Vmn2r37-201ENSMUST00000072787 3081 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Col8a1Q00780 Mir19b-2-201ENSMUST00000083539 84 ntBASIC2.55□□□□□ -2
Col8a1Q00780 Olfr218-203ENSMUST00000216603 3623 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Col8a1Q00780 Olfr609-202ENSMUST00000216075 3429 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Col8a1Q00780 Olfr924-202ENSMUST00000217350 3431 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Col8a1Q00780 Rag2-201ENSMUST00000044031 3424 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Col8a1Q00780 Gm44842-201ENSMUST00000209173 3372 ntBASIC2.55□□□□□ -2
Col8a1Q00780 Vmn2r42-205ENSMUST00000146278 3086 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
Col8a1Q00780 Olfr1039-202ENSMUST00000214364 3925 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Col8a1Q00780 Gm12128-201ENSMUST00000131013 2914 ntTSL 1 (best) BASIC2.54□□□□□ -2
Col8a1Q00780 Gm10730-201ENSMUST00000194097 2723 ntBASIC2.54□□□□□ -2
Col8a1Q00780 Gm11285-201ENSMUST00000118443 322 ntBASIC2.54□□□□□ -2
Col8a1Q00780 Gm25323-201ENSMUST00000122555 103 ntBASIC2.54□□□□□ -2
Col8a1Q00780 Gm25153-201ENSMUST00000157118 156 ntBASIC2.54□□□□□ -2
Col8a1Q00780 Gm24718-201ENSMUST00000157521 136 ntBASIC2.54□□□□□ -2
Col8a1Q00780 Gm23933-201ENSMUST00000178405 79 ntBASIC2.54□□□□□ -2
Col8a1Q00780 Gm43206-201ENSMUST00000197990 114 ntBASIC2.54□□□□□ -2
Col8a1Q00780 Mir1291-201ENSMUST00000199842 117 ntBASIC2.54□□□□□ -2
Col8a1Q00780 Gm45791-201ENSMUST00000212908 352 ntBASIC2.54□□□□□ -2
Col8a1Q00780 AC167721.1-201ENSMUST00000217088 279 ntBASIC2.54□□□□□ -2
Col8a1Q00780 AC124524.1-201ENSMUST00000225833 181 ntBASIC2.54□□□□□ -2
Col8a1Q00780 Gm22507-201ENSMUST00000082773 160 ntBASIC2.54□□□□□ -2
Col8a1Q00780 Snora34-201ENSMUST00000083402 138 ntBASIC2.54□□□□□ -2
Col8a1Q00780 Gm23850-201ENSMUST00000083830 169 ntBASIC2.54□□□□□ -2
Col8a1Q00780 Olfr849-202ENSMUST00000217273 6140 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Col8a1Q00780 Gm14288-201ENSMUST00000109020 3438 ntAPPRIS P2 TSL 1 (best) BASIC2.54□□□□□ -2
Col8a1Q00780 Gm26573-201ENSMUST00000181199 3020 ntTSL 5 BASIC2.54□□□□□ -2
Col8a1Q00780 Adgrg4-204ENSMUST00000153784 9329 ntAPPRIS P5 TSL 5 BASIC2.53□□□□□ -2
Col8a1Q00780 Gm38071-201ENSMUST00000195792 3378 ntBASIC2.53□□□□□ -2
Col8a1Q00780 Vmn1r172-202ENSMUST00000173101 9109 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Col8a1Q00780 Gm23911-201ENSMUST00000104596 134 ntBASIC2.53□□□□□ -2
Col8a1Q00780 Gm14502-201ENSMUST00000118154 113 ntBASIC2.53□□□□□ -2
Col8a1Q00780 Gm12513-201ENSMUST00000118617 352 ntBASIC2.53□□□□□ -2
Col8a1Q00780 Gm22790-201ENSMUST00000157229 129 ntBASIC2.53□□□□□ -2
Col8a1Q00780 Gm25280-201ENSMUST00000157269 101 ntBASIC2.53□□□□□ -2
Col8a1Q00780 Gm24480-201ENSMUST00000157442 103 ntBASIC2.53□□□□□ -2
Col8a1Q00780 Mir5136-201ENSMUST00000175573 76 ntBASIC2.53□□□□□ -2
Col8a1Q00780 Mir7039-201ENSMUST00000183852 85 ntBASIC2.53□□□□□ -2
Col8a1Q00780 AC154296.1-201ENSMUST00000198150 67 ntBASIC2.53□□□□□ -2
Col8a1Q00780 Mir378a-201ENSMUST00000198300 66 ntBASIC2.53□□□□□ -2
Col8a1Q00780 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC2.53□□□□□ -2
Col8a1Q00780 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC2.53□□□□□ -2
Col8a1Q00780 AC129202.2-201ENSMUST00000225123 177 ntBASIC2.53□□□□□ -2
Col8a1Q00780 Gm16976-205ENSMUST00000227324 226 ntBASIC2.53□□□□□ -2
Col8a1Q00780 Gm23723-201ENSMUST00000082996 132 ntBASIC2.53□□□□□ -2
Col8a1Q00780 Gm21876-201ENSMUST00000096511 282 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Col8a1Q00780 Slain1os-201ENSMUST00000160117 3101 ntTSL 1 (best) BASIC2.53□□□□□ -2
Col8a1Q00780 Olfr235-203ENSMUST00000214551 2240 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Col8a1Q00780 Fam81b-201ENSMUST00000208418 2760 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Col8a1Q00780 Zfp709-201ENSMUST00000034259 2181 ntTSL 5 BASIC2.53□□□□□ -2
Col8a1Q00780 Olfr509-203ENSMUST00000214861 3535 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Col8a1Q00780 Agmo-201ENSMUST00000049874 2423 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Col8a1Q00780 Dpp10-201ENSMUST00000112603 4477 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
Col8a1Q00780 Gm23011-201ENSMUST00000104148 132 ntBASIC2.52□□□□□ -2.01
Col8a1Q00780 Gm25012-201ENSMUST00000158396 164 ntBASIC2.52□□□□□ -2.01
Col8a1Q00780 Gm27379-201ENSMUST00000183730 123 ntBASIC2.52□□□□□ -2.01
Col8a1Q00780 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC2.52□□□□□ -2.01
Col8a1Q00780 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC2.52□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 102.3 ms