Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Gm26108-201ENSMUST00000083973 191 ntBASIC0.68□□□□□ -2.3
Shox2P70390 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC0.68□□□□□ -2.3
Shox2P70390 Gm15102-201ENSMUST00000118740 1502 ntBASIC0.68□□□□□ -2.3
Shox2P70390 Gm15101-201ENSMUST00000178818 1502 ntBASIC0.68□□□□□ -2.3
Shox2P70390 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
Shox2P70390 Gm10972-201ENSMUST00000107276 81 ntAPPRIS P1 TSL 5 BASIC0.67□□□□□ -2.3
Shox2P70390 Gm11572-201ENSMUST00000119164 120 ntBASIC0.67□□□□□ -2.3
Shox2P70390 Mir3109-201ENSMUST00000175301 88 ntBASIC0.67□□□□□ -2.3
Shox2P70390 Gm25248-201ENSMUST00000175473 98 ntBASIC0.67□□□□□ -2.3
Shox2P70390 Gm26285-201ENSMUST00000177923 107 ntBASIC0.67□□□□□ -2.3
Shox2P70390 Gm17067-202ENSMUST00000180131 123 ntBASIC0.67□□□□□ -2.3
Shox2P70390 Gm26871-203ENSMUST00000181060 355 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
Shox2P70390 Gm26968-201ENSMUST00000182894 481 ntBASIC0.67□□□□□ -2.3
Shox2P70390 Gm27236-201ENSMUST00000184147 442 ntBASIC0.67□□□□□ -2.3
Shox2P70390 Gm28881-201ENSMUST00000187710 470 ntTSL 3 BASIC0.67□□□□□ -2.3
Shox2P70390 Gm28661-201ENSMUST00000188231 681 ntBASIC0.67□□□□□ -2.3
Shox2P70390 Gm43944-201ENSMUST00000205220 120 ntBASIC0.67□□□□□ -2.3
Shox2P70390 AC167192.2-201ENSMUST00000224794 198 ntBASIC0.67□□□□□ -2.3
Shox2P70390 Gm23622-201ENSMUST00000082460 107 ntBASIC0.67□□□□□ -2.3
Shox2P70390 Gm24356-201ENSMUST00000082859 106 ntBASIC0.67□□□□□ -2.3
Shox2P70390 Gm25578-201ENSMUST00000083406 104 ntBASIC0.67□□□□□ -2.3
Shox2P70390 Olfr1154-202ENSMUST00000215017 2917 ntAPPRIS P1 TSL 5 BASIC0.67□□□□□ -2.3
Shox2P70390 Gm10033-201ENSMUST00000072427 1813 ntBASIC0.66□□□□□ -2.3
Shox2P70390 Gm14287-201ENSMUST00000121060 117 ntBASIC0.66□□□□□ -2.3
Shox2P70390 Gm27926-201ENSMUST00000157180 66 ntBASIC0.66□□□□□ -2.3
Shox2P70390 Gm24401-201ENSMUST00000157868 91 ntBASIC0.66□□□□□ -2.3
Shox2P70390 Gm23114-201ENSMUST00000158478 117 ntBASIC0.66□□□□□ -2.3
Shox2P70390 Gm24152-201ENSMUST00000082764 163 ntBASIC0.66□□□□□ -2.3
Shox2P70390 Gm23749-201ENSMUST00000104223 131 ntBASIC0.65□□□□□ -2.31
Shox2P70390 Gm11334-201ENSMUST00000121969 156 ntBASIC0.65□□□□□ -2.31
Shox2P70390 Gm17148-201ENSMUST00000164702 249 ntBASIC0.65□□□□□ -2.31
Shox2P70390 Smr2-203ENSMUST00000196477 676 ntAPPRIS ALT2 TSL 1 (best) BASIC0.65□□□□□ -2.31
Shox2P70390 Smr2-204ENSMUST00000199635 680 ntAPPRIS ALT2 TSL 1 (best) BASIC0.65□□□□□ -2.31
Shox2P70390 Gm20144-201ENSMUST00000203031 165 ntBASIC0.65□□□□□ -2.31
Shox2P70390 CT954323.1-201ENSMUST00000222774 229 ntBASIC0.65□□□□□ -2.31
Shox2P70390 Gm11351-202ENSMUST00000225724 478 ntBASIC0.65□□□□□ -2.31
Shox2P70390 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.31
Shox2P70390 Gm25789-201ENSMUST00000083294 76 ntBASIC0.65□□□□□ -2.31
Shox2P70390 Mir133a-1-201ENSMUST00000083465 68 ntBASIC0.65□□□□□ -2.31
Shox2P70390 Gm23041-201ENSMUST00000083868 106 ntBASIC0.65□□□□□ -2.31
Shox2P70390 Gm22771-201ENSMUST00000104449 91 ntBASIC0.64□□□□□ -2.31
Shox2P70390 Gm11410-201ENSMUST00000120053 1143 ntBASIC0.64□□□□□ -2.31
Shox2P70390 Gm25544-201ENSMUST00000122676 120 ntBASIC0.64□□□□□ -2.31
Shox2P70390 Gm25884-201ENSMUST00000157782 62 ntBASIC0.64□□□□□ -2.31
Shox2P70390 Gm25486-201ENSMUST00000158726 63 ntBASIC0.64□□□□□ -2.31
Shox2P70390 Gm29022-201ENSMUST00000190702 225 ntBASIC0.64□□□□□ -2.31
Shox2P70390 Gm37128-201ENSMUST00000192599 232 ntBASIC0.64□□□□□ -2.31
Shox2P70390 Gm42855-201ENSMUST00000197388 253 ntBASIC0.64□□□□□ -2.31
Shox2P70390 Gm44010-201ENSMUST00000204432 331 ntBASIC0.64□□□□□ -2.31
Shox2P70390 AC153541.1-201ENSMUST00000213786 294 ntBASIC0.64□□□□□ -2.31
Shox2P70390 AC164612.2-202ENSMUST00000216314 253 ntBASIC0.64□□□□□ -2.31
Shox2P70390 AC155712.1-201ENSMUST00000219704 160 ntBASIC0.64□□□□□ -2.31
Shox2P70390 Mir33-201ENSMUST00000083531 69 ntBASIC0.64□□□□□ -2.31
Shox2P70390 Mir216a-201ENSMUST00000083605 72 ntBASIC0.64□□□□□ -2.31
Shox2P70390 Gm14296-202ENSMUST00000108931 750 ntBASIC0.63□□□□□ -2.31
Shox2P70390 Gm11407-201ENSMUST00000120362 1058 ntBASIC0.63□□□□□ -2.31
Shox2P70390 A130030D18Rik-201ENSMUST00000128608 654 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
Shox2P70390 Gm22113-201ENSMUST00000158343 104 ntBASIC0.63□□□□□ -2.31
Shox2P70390 Gm22841-201ENSMUST00000158443 62 ntBASIC0.63□□□□□ -2.31
Shox2P70390 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC0.63□□□□□ -2.31
Shox2P70390 Olfr1064-ps1-201ENSMUST00000213670 600 ntBASIC0.63□□□□□ -2.31
Shox2P70390 Gm22704-201ENSMUST00000083027 137 ntBASIC0.63□□□□□ -2.31
Shox2P70390 Gm22884-201ENSMUST00000083127 140 ntBASIC0.63□□□□□ -2.31
Shox2P70390 Mir155-201ENSMUST00000083463 65 ntBASIC0.63□□□□□ -2.31
Shox2P70390 Gm25650-201ENSMUST00000083784 162 ntBASIC0.63□□□□□ -2.31
Shox2P70390 Traj35-201ENSMUST00000103706 65 ntAPPRIS P1 BASIC0.62□□□□□ -2.31
Shox2P70390 Gm22545-201ENSMUST00000104350 132 ntBASIC0.62□□□□□ -2.31
Shox2P70390 Mir1b-201ENSMUST00000117012 122 ntBASIC0.62□□□□□ -2.31
Shox2P70390 Gm25102-201ENSMUST00000122479 112 ntBASIC0.62□□□□□ -2.31
Shox2P70390 4930511O05Rik-201ENSMUST00000155912 391 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
Shox2P70390 Gm24438-201ENSMUST00000157893 115 ntBASIC0.62□□□□□ -2.31
Shox2P70390 Gm24277-201ENSMUST00000158661 104 ntBASIC0.62□□□□□ -2.31
Shox2P70390 Mir6346-201ENSMUST00000183982 81 ntBASIC0.62□□□□□ -2.31
Shox2P70390 Gm27919-201ENSMUST00000185163 107 ntBASIC0.62□□□□□ -2.31
Shox2P70390 Gm28992-201ENSMUST00000190534 139 ntBASIC0.62□□□□□ -2.31
Shox2P70390 Gm44921-201ENSMUST00000205290 301 ntBASIC0.62□□□□□ -2.31
Shox2P70390 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC0.62□□□□□ -2.31
Shox2P70390 Gm24208-201ENSMUST00000082783 135 ntBASIC0.62□□□□□ -2.31
Shox2P70390 Gm25513-201ENSMUST00000083861 162 ntBASIC0.62□□□□□ -2.31
Shox2P70390 Gm21876-201ENSMUST00000096511 282 ntAPPRIS P1 TSL 5 BASIC0.62□□□□□ -2.31
Shox2P70390 Gm13246-201ENSMUST00000120994 315 ntBASIC0.61□□□□□ -2.31
Shox2P70390 Defb44-ps-201ENSMUST00000126871 219 ntBASIC0.61□□□□□ -2.31
Shox2P70390 Gm16358-201ENSMUST00000146046 210 ntBASIC0.61□□□□□ -2.31
Shox2P70390 Mir6364-201ENSMUST00000183396 86 ntBASIC0.61□□□□□ -2.31
Shox2P70390 Gm18185-201ENSMUST00000186725 667 ntBASIC0.61□□□□□ -2.31
Shox2P70390 Gm28408-201ENSMUST00000191557 463 ntBASIC0.61□□□□□ -2.31
Shox2P70390 Gm43250-201ENSMUST00000196536 273 ntBASIC0.61□□□□□ -2.31
Shox2P70390 Gm44326-201ENSMUST00000198226 101 ntBASIC0.61□□□□□ -2.31
Shox2P70390 Gm24311-201ENSMUST00000082570 104 ntBASIC0.61□□□□□ -2.31
Shox2P70390 Gm22302-201ENSMUST00000082657 106 ntBASIC0.61□□□□□ -2.31
Shox2P70390 Snord32a-201ENSMUST00000083285 83 ntBASIC0.61□□□□□ -2.31
Shox2P70390 Gm26168-201ENSMUST00000083787 112 ntBASIC0.61□□□□□ -2.31
Shox2P70390 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
Shox2P70390 Gm23013-201ENSMUST00000104146 106 ntBASIC0.6□□□□□ -2.31
Shox2P70390 n-R5s63-201ENSMUST00000122756 103 ntBASIC0.6□□□□□ -2.31
Shox2P70390 Gm23542-201ENSMUST00000158208 96 ntBASIC0.6□□□□□ -2.31
Shox2P70390 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC0.6□□□□□ -2.31
Shox2P70390 Gm22802-201ENSMUST00000175621 89 ntBASIC0.6□□□□□ -2.31
Shox2P70390 Gm28217-201ENSMUST00000188613 648 ntTSL 5 BASIC0.6□□□□□ -2.31
Shox2P70390 Gm29490-201ENSMUST00000190923 342 ntBASIC0.6□□□□□ -2.31
Retrieved 100 of 76,532 protein–RNA pairs in 81.5 ms