Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Gm24448-201ENSMUST00000083979 107 ntBASIC-0.08□□□□□ -2.42
Cux1P53564 Gm22886-201ENSMUST00000093714 107 ntBASIC-0.08□□□□□ -2.42
Cux1P53564 mt-Nd5-201ENSMUST00000082418 1824 ntAPPRIS P1 BASIC-0.08□□□□□ -2.42
Cux1P53564 Gm24277-201ENSMUST00000158661 104 ntBASIC-0.08□□□□□ -2.42
Cux1P53564 Stfa3-201ENSMUST00000068182 412 ntAPPRIS P1 TSL 1 (best) BASIC-0.08□□□□□ -2.42
Cux1P53564 Mir500-201ENSMUST00000093600 92 ntBASIC-0.08□□□□□ -2.42
Cux1P53564 Gm15213-201ENSMUST00000122098 216 ntBASIC-0.09□□□□□ -2.42
Cux1P53564 Gm14126-201ENSMUST00000122345 395 ntBASIC-0.09□□□□□ -2.42
Cux1P53564 Gm22087-201ENSMUST00000158339 88 ntBASIC-0.09□□□□□ -2.42
Cux1P53564 Mir466m-201ENSMUST00000175052 84 ntBASIC-0.09□□□□□ -2.42
Cux1P53564 Gm11168-203ENSMUST00000178348 672 ntAPPRIS ALT2 TSL 5 BASIC-0.09□□□□□ -2.42
Cux1P53564 Gm23144-201ENSMUST00000180226 107 ntBASIC-0.09□□□□□ -2.42
Cux1P53564 Mir8107-201ENSMUST00000184024 117 ntBASIC-0.09□□□□□ -2.42
Cux1P53564 Gm44948-201ENSMUST00000209050 149 ntBASIC-0.09□□□□□ -2.42
Cux1P53564 AC153864.2-201ENSMUST00000220424 292 ntBASIC-0.09□□□□□ -2.42
Cux1P53564 Sprr4-201ENSMUST00000062129 231 ntAPPRIS P1 BASIC-0.09□□□□□ -2.42
Cux1P53564 Gm26228-201ENSMUST00000082512 107 ntBASIC-0.09□□□□□ -2.42
Cux1P53564 Gm22005-201ENSMUST00000082795 141 ntBASIC-0.09□□□□□ -2.42
Cux1P53564 Gm25518-201ENSMUST00000083864 107 ntBASIC-0.09□□□□□ -2.42
Cux1P53564 Gm14296-202ENSMUST00000108931 750 ntBASIC-0.1□□□□□ -2.43
Cux1P53564 Gm13729-201ENSMUST00000120328 406 ntBASIC-0.1□□□□□ -2.43
Cux1P53564 n-R5s73-201ENSMUST00000122508 107 ntBASIC-0.1□□□□□ -2.43
Cux1P53564 Gm23981-201ENSMUST00000157136 106 ntBASIC-0.1□□□□□ -2.43
Cux1P53564 Gm16539-201ENSMUST00000160086 327 ntBASIC-0.1□□□□□ -2.43
Cux1P53564 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC-0.1□□□□□ -2.43
Cux1P53564 Lce6a-202ENSMUST00000170676 485 ntAPPRIS P1 TSL 1 (best) BASIC-0.1□□□□□ -2.43
Cux1P53564 Olfr797-ps1-201ENSMUST00000203614 415 ntBASIC-0.1□□□□□ -2.43
Cux1P53564 Mir214-201ENSMUST00000083582 110 ntBASIC-0.1□□□□□ -2.43
Cux1P53564 Gm25513-201ENSMUST00000083861 162 ntBASIC-0.1□□□□□ -2.43
Cux1P53564 Gm24587-201ENSMUST00000116697 89 ntBASIC-0.11□□□□□ -2.43
Cux1P53564 Gm16588-201ENSMUST00000162889 355 ntBASIC-0.11□□□□□ -2.43
Cux1P53564 Gm25670-201ENSMUST00000178423 107 ntBASIC-0.11□□□□□ -2.43
Cux1P53564 Gm26239-201ENSMUST00000178842 107 ntBASIC-0.11□□□□□ -2.43
Cux1P53564 Gm20144-201ENSMUST00000203031 165 ntBASIC-0.11□□□□□ -2.43
Cux1P53564 CT033781.2-201ENSMUST00000221113 153 ntBASIC-0.11□□□□□ -2.43
Cux1P53564 Gm24623-201ENSMUST00000082616 194 ntBASIC-0.11□□□□□ -2.43
Cux1P53564 Gm24292-201ENSMUST00000082888 107 ntBASIC-0.11□□□□□ -2.43
Cux1P53564 Gm13804-201ENSMUST00000119552 172 ntBASIC-0.12□□□□□ -2.43
Cux1P53564 Gm11410-201ENSMUST00000120053 1143 ntBASIC-0.12□□□□□ -2.43
Cux1P53564 Gm12068-201ENSMUST00000153153 376 ntTSL 3 BASIC-0.12□□□□□ -2.43
Cux1P53564 Gm43220-201ENSMUST00000199299 282 ntBASIC-0.12□□□□□ -2.43
Cux1P53564 Gm26457-201ENSMUST00000082678 78 ntBASIC-0.12□□□□□ -2.43
Cux1P53564 Gm25697-201ENSMUST00000082902 98 ntBASIC-0.12□□□□□ -2.43
Cux1P53564 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC-0.12□□□□□ -2.43
Cux1P53564 Gm16242-201ENSMUST00000117741 334 ntBASIC-0.13□□□□□ -2.43
Cux1P53564 Gm11856-201ENSMUST00000118712 276 ntBASIC-0.13□□□□□ -2.43
Cux1P53564 Gm11512-201ENSMUST00000119669 663 ntBASIC-0.13□□□□□ -2.43
Cux1P53564 Gm27510-201ENSMUST00000158214 64 ntBASIC-0.13□□□□□ -2.43
Cux1P53564 Gm27793-201ENSMUST00000183405 76 ntBASIC-0.13□□□□□ -2.43
Cux1P53564 Mir195b-201ENSMUST00000184814 97 ntBASIC-0.13□□□□□ -2.43
Cux1P53564 Gm7654-201ENSMUST00000186738 683 ntBASIC-0.13□□□□□ -2.43
Cux1P53564 Stfa2l1-201ENSMUST00000079184 414 ntAPPRIS P1 TSL 1 (best) BASIC-0.13□□□□□ -2.43
Cux1P53564 Mir465-201ENSMUST00000093563 74 ntBASIC-0.13□□□□□ -2.43
Cux1P53564 Gm24468-201ENSMUST00000104489 104 ntBASIC-0.13□□□□□ -2.43
Cux1P53564 Gm11254-201ENSMUST00000122368 653 ntBASIC-0.13□□□□□ -2.43
Cux1P53564 Defb44-ps-201ENSMUST00000126871 219 ntBASIC-0.13□□□□□ -2.43
Cux1P53564 Mir691-201ENSMUST00000199719 78 ntBASIC-0.13□□□□□ -2.43
Cux1P53564 Gm19572-201ENSMUST00000214326 338 ntBASIC-0.13□□□□□ -2.43
Cux1P53564 AC157476.1-201ENSMUST00000215555 169 ntBASIC-0.13□□□□□ -2.43
Cux1P53564 Olfr1102-201ENSMUST00000055129 1063 ntAPPRIS P1 BASIC-0.13□□□□□ -2.43
Cux1P53564 Sval3-201ENSMUST00000080742 550 ntAPPRIS P1 TSL 1 (best) BASIC-0.13□□□□□ -2.43
Cux1P53564 Gm22229-201ENSMUST00000082987 108 ntBASIC-0.13□□□□□ -2.43
Cux1P53564 Gm24616-201ENSMUST00000083274 139 ntBASIC-0.13□□□□□ -2.43
Cux1P53564 Mir672-201ENSMUST00000102331 100 ntBASIC-0.14□□□□□ -2.43
Cux1P53564 Traj38-201ENSMUST00000103704 62 ntAPPRIS P1 BASIC-0.14□□□□□ -2.43
Cux1P53564 Gm22143-201ENSMUST00000157401 203 ntBASIC-0.14□□□□□ -2.43
Cux1P53564 Gm28011-201ENSMUST00000184097 175 ntBASIC-0.14□□□□□ -2.43
Cux1P53564 AC124542.1-201ENSMUST00000205588 908 ntBASIC-0.14□□□□□ -2.43
Cux1P53564 Gm45265-201ENSMUST00000210852 2497 ntBASIC-0.14□□□□□ -2.43
Cux1P53564 Zfp934-201ENSMUST00000082203 993 ntTSL 5 BASIC-0.14□□□□□ -2.43
Cux1P53564 Gm26168-201ENSMUST00000083787 112 ntBASIC-0.14□□□□□ -2.43
Cux1P53564 Gm25627-201ENSMUST00000084003 153 ntBASIC-0.14□□□□□ -2.43
Cux1P53564 Gm24296-201ENSMUST00000158297 106 ntBASIC-0.15□□□□□ -2.43
Cux1P53564 Gm22308-201ENSMUST00000177609 107 ntBASIC-0.15□□□□□ -2.43
Cux1P53564 Gm23619-201ENSMUST00000178411 94 ntBASIC-0.15□□□□□ -2.43
Cux1P53564 Gm25474-201ENSMUST00000179052 94 ntBASIC-0.15□□□□□ -2.43
Cux1P53564 Gm22047-201ENSMUST00000179176 94 ntBASIC-0.15□□□□□ -2.43
Cux1P53564 Gm27226-201ENSMUST00000184676 511 ntTSL 2 BASIC-0.15□□□□□ -2.43
Cux1P53564 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC-0.15□□□□□ -2.43
Cux1P53564 Gm36953-201ENSMUST00000195295 268 ntBASIC-0.15□□□□□ -2.43
Cux1P53564 Gm3702-201ENSMUST00000211754 346 ntBASIC-0.15□□□□□ -2.43
Cux1P53564 Gm6607-201ENSMUST00000215035 328 ntBASIC-0.15□□□□□ -2.43
Cux1P53564 AC138667.2-201ENSMUST00000224880 598 ntBASIC-0.15□□□□□ -2.43
Cux1P53564 Gm23821-201ENSMUST00000158738 106 ntBASIC-0.16□□□□□ -2.43
Cux1P53564 Gm23416-201ENSMUST00000175520 95 ntBASIC-0.16□□□□□ -2.43
Cux1P53564 AC116465.1-201ENSMUST00000220324 235 ntBASIC-0.16□□□□□ -2.43
Cux1P53564 AC154506.3-201ENSMUST00000225417 213 ntBASIC-0.16□□□□□ -2.43
Cux1P53564 Gm24163-201ENSMUST00000093660 132 ntBASIC-0.16□□□□□ -2.43
Cux1P53564 Gm23838-201ENSMUST00000158067 162 ntBASIC-0.17□□□□□ -2.44
Cux1P53564 Gm25307-201ENSMUST00000158885 106 ntBASIC-0.17□□□□□ -2.44
Cux1P53564 Gm28848-201ENSMUST00000189984 168 ntBASIC-0.17□□□□□ -2.44
Cux1P53564 AC116589.9-201ENSMUST00000221462 908 ntBASIC-0.17□□□□□ -2.44
Cux1P53564 Mir126a-201ENSMUST00000083606 73 ntBASIC-0.17□□□□□ -2.44
Cux1P53564 Gm14803-201ENSMUST00000117163 361 ntBASIC-0.18□□□□□ -2.44
Cux1P53564 Gm25054-201ENSMUST00000157370 97 ntBASIC-0.18□□□□□ -2.44
Cux1P53564 Gm20391-201ENSMUST00000174722 106 ntBASIC-0.18□□□□□ -2.44
Cux1P53564 Gm18588-201ENSMUST00000177308 492 ntBASIC-0.18□□□□□ -2.44
Cux1P53564 Topbp1-ps2-201ENSMUST00000191289 189 ntBASIC-0.18□□□□□ -2.44
Cux1P53564 AC125167.1-201ENSMUST00000198698 141 ntBASIC-0.18□□□□□ -2.44
Cux1P53564 Gm45315-201ENSMUST00000209283 333 ntBASIC-0.18□□□□□ -2.44
Retrieved 100 of 76,532 protein–RNA pairs in 120.7 ms