Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm13756-201ENSMUST00000117618 222 ntBASIC2.59□□□□□ -1.99
Shmt1P50431 Gm13862-201ENSMUST00000121220 197 ntBASIC2.59□□□□□ -1.99
Shmt1P50431 Gm24212-201ENSMUST00000158258 132 ntBASIC2.59□□□□□ -1.99
Shmt1P50431 Gm24277-201ENSMUST00000158661 104 ntBASIC2.59□□□□□ -1.99
Shmt1P50431 Gm23194-201ENSMUST00000158813 105 ntBASIC2.59□□□□□ -1.99
Shmt1P50431 Gm24304-201ENSMUST00000177635 107 ntBASIC2.59□□□□□ -1.99
Shmt1P50431 Gm43562-201ENSMUST00000196439 238 ntTSL 3 BASIC2.59□□□□□ -1.99
Shmt1P50431 Gm9251-201ENSMUST00000197202 628 ntBASIC2.59□□□□□ -1.99
Shmt1P50431 CT033785.1-201ENSMUST00000224872 272 ntBASIC2.59□□□□□ -1.99
Shmt1P50431 Mir186-201ENSMUST00000083497 71 ntBASIC2.59□□□□□ -1.99
Shmt1P50431 Gm10217-201ENSMUST00000088080 135 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
Shmt1P50431 Mgat4c-211ENSMUST00000163753 3862 ntAPPRIS P1 TSL 3 BASIC2.59□□□□□ -1.99
Shmt1P50431 Olfr339-202ENSMUST00000216645 4867 ntAPPRIS P1 TSL 3 BASIC2.59□□□□□ -2
Shmt1P50431 Zfp280c-202ENSMUST00000076635 4355 ntAPPRIS P3 TSL 1 (best) BASIC2.58□□□□□ -2
Shmt1P50431 Olfr1201-203ENSMUST00000216213 2602 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Shmt1P50431 Gm26015-201ENSMUST00000104402 125 ntBASIC2.58□□□□□ -2
Shmt1P50431 n-R5s26-201ENSMUST00000104601 122 ntBASIC2.58□□□□□ -2
Shmt1P50431 Gm11060-201ENSMUST00000111107 72 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Shmt1P50431 Gm7209-201ENSMUST00000122339 333 ntBASIC2.58□□□□□ -2
Shmt1P50431 Gm22477-201ENSMUST00000122569 316 ntBASIC2.58□□□□□ -2
Shmt1P50431 Gm23588-201ENSMUST00000157659 99 ntBASIC2.58□□□□□ -2
Shmt1P50431 Gm22664-201ENSMUST00000158719 105 ntBASIC2.58□□□□□ -2
Shmt1P50431 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC2.58□□□□□ -2
Shmt1P50431 Gm42716-203ENSMUST00000197140 259 ntTSL 3 BASIC2.58□□□□□ -2
Shmt1P50431 Gm44903-201ENSMUST00000206840 130 ntBASIC2.58□□□□□ -2
Shmt1P50431 AC124104.1-201ENSMUST00000226279 417 ntBASIC2.58□□□□□ -2
Shmt1P50431 Gm26126-201ENSMUST00000083188 164 ntBASIC2.58□□□□□ -2
Shmt1P50431 Gm22972-201ENSMUST00000083297 131 ntBASIC2.58□□□□□ -2
Shmt1P50431 Gm23947-201ENSMUST00000093636 107 ntBASIC2.58□□□□□ -2
Shmt1P50431 Gm37063-201ENSMUST00000194678 3520 ntBASIC2.58□□□□□ -2
Shmt1P50431 Olfr726-204ENSMUST00000215105 1752 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Shmt1P50431 Gm15303-201ENSMUST00000118676 2624 ntBASIC2.57□□□□□ -2
Shmt1P50431 Gm15314-201ENSMUST00000120740 1887 ntBASIC2.57□□□□□ -2
Shmt1P50431 Gm11334-201ENSMUST00000121969 156 ntBASIC2.57□□□□□ -2
Shmt1P50431 Gm24595-201ENSMUST00000122501 110 ntBASIC2.57□□□□□ -2
Shmt1P50431 Gm23599-201ENSMUST00000157261 251 ntBASIC2.57□□□□□ -2
Shmt1P50431 Gm23324-201ENSMUST00000157421 131 ntBASIC2.57□□□□□ -2
Shmt1P50431 Gm25888-201ENSMUST00000157778 302 ntBASIC2.57□□□□□ -2
Shmt1P50431 Gm25866-201ENSMUST00000158245 112 ntBASIC2.57□□□□□ -2
Shmt1P50431 Gm24210-201ENSMUST00000158263 133 ntBASIC2.57□□□□□ -2
Shmt1P50431 Gm26160-201ENSMUST00000158965 63 ntBASIC2.57□□□□□ -2
Shmt1P50431 Gm26435-201ENSMUST00000179026 107 ntBASIC2.57□□□□□ -2
Shmt1P50431 Gm27369-201ENSMUST00000185182 71 ntBASIC2.57□□□□□ -2
Shmt1P50431 Gm37037-201ENSMUST00000194475 424 ntBASIC2.57□□□□□ -2
Shmt1P50431 Mir378a-201ENSMUST00000198300 66 ntBASIC2.57□□□□□ -2
Shmt1P50431 Gm8031-201ENSMUST00000213430 626 ntBASIC2.57□□□□□ -2
Shmt1P50431 Gm24698-201ENSMUST00000083883 130 ntBASIC2.57□□□□□ -2
Shmt1P50431 Gm10172-201ENSMUST00000085929 558 ntBASIC2.57□□□□□ -2
Shmt1P50431 Olfr1477-202ENSMUST00000217001 4000 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
Shmt1P50431 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
Shmt1P50431 Gm26341-201ENSMUST00000104561 134 ntBASIC2.56□□□□□ -2
Shmt1P50431 Gm14536-201ENSMUST00000118324 138 ntBASIC2.56□□□□□ -2
Shmt1P50431 Gm15027-201ENSMUST00000120922 138 ntBASIC2.56□□□□□ -2
Shmt1P50431 Gm22666-201ENSMUST00000158717 164 ntBASIC2.56□□□□□ -2
Shmt1P50431 Gm24573-201ENSMUST00000175499 112 ntBASIC2.56□□□□□ -2
Shmt1P50431 Gm5224-201ENSMUST00000183060 350 ntBASIC2.56□□□□□ -2
Shmt1P50431 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC2.56□□□□□ -2
Shmt1P50431 Gm43587-201ENSMUST00000199590 204 ntBASIC2.56□□□□□ -2
Shmt1P50431 AC126672.1-201ENSMUST00000217096 396 ntBASIC2.56□□□□□ -2
Shmt1P50431 Gm22686-201ENSMUST00000082847 100 ntBASIC2.56□□□□□ -2
Shmt1P50431 Gm23246-201ENSMUST00000083371 67 ntBASIC2.56□□□□□ -2
Shmt1P50431 Vmn1r75-206ENSMUST00000228463 6508 ntAPPRIS P2 BASIC2.56□□□□□ -2
Shmt1P50431 Rgs18-201ENSMUST00000027603 2031 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Shmt1P50431 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
Shmt1P50431 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Shmt1P50431 Ighv9-3-201ENSMUST00000103473 351 ntAPPRIS P1 BASIC2.55□□□□□ -2
Shmt1P50431 Gm13885-201ENSMUST00000117569 187 ntBASIC2.55□□□□□ -2
Shmt1P50431 Gm13560-201ENSMUST00000121865 329 ntBASIC2.55□□□□□ -2
Shmt1P50431 Gm24141-201ENSMUST00000122776 115 ntBASIC2.55□□□□□ -2
Shmt1P50431 Gm22775-201ENSMUST00000177630 120 ntBASIC2.55□□□□□ -2
Shmt1P50431 Gm23569-201ENSMUST00000180120 120 ntBASIC2.55□□□□□ -2
Shmt1P50431 Gm45393-201ENSMUST00000211634 2631 ntBASIC2.55□□□□□ -2
Shmt1P50431 Gm25815-201ENSMUST00000082755 107 ntBASIC2.55□□□□□ -2
Shmt1P50431 Rex2-201ENSMUST00000075775 3993 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
Shmt1P50431 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
Shmt1P50431 Gm22935-201ENSMUST00000103960 104 ntBASIC2.54□□□□□ -2
Shmt1P50431 Gm23381-201ENSMUST00000157676 94 ntBASIC2.54□□□□□ -2
Shmt1P50431 Gm22850-201ENSMUST00000157714 82 ntBASIC2.54□□□□□ -2
Shmt1P50431 Gm22966-201ENSMUST00000157957 129 ntBASIC2.54□□□□□ -2
Shmt1P50431 Gm23260-201ENSMUST00000158317 172 ntBASIC2.54□□□□□ -2
Shmt1P50431 Gm14435-203ENSMUST00000172025 192 ntTSL 5 BASIC2.54□□□□□ -2
Shmt1P50431 Igkv2-93-1-201ENSMUST00000196774 272 ntBASIC2.54□□□□□ -2
Shmt1P50431 AC125167.1-201ENSMUST00000198698 141 ntBASIC2.54□□□□□ -2
Shmt1P50431 Trav5-2-201ENSMUST00000199855 280 ntBASIC2.54□□□□□ -2
Shmt1P50431 Gm14440-201ENSMUST00000098998 192 ntTSL 5 BASIC2.54□□□□□ -2
Shmt1P50431 AC164164.1-201ENSMUST00000223245 2340 ntBASIC2.53□□□□□ -2
Shmt1P50431 Tlr7-201ENSMUST00000060719 3776 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Shmt1P50431 Mir542-201ENSMUST00000102186 85 ntBASIC2.53□□□□□ -2
Shmt1P50431 Gm13200-201ENSMUST00000138802 258 ntTSL 3 BASIC2.53□□□□□ -2
Shmt1P50431 Gm24911-201ENSMUST00000157292 136 ntBASIC2.53□□□□□ -2
Shmt1P50431 Gm23718-201ENSMUST00000157350 307 ntBASIC2.53□□□□□ -2
Shmt1P50431 Gm22227-201ENSMUST00000157356 259 ntBASIC2.53□□□□□ -2
Shmt1P50431 Gm23665-201ENSMUST00000158054 62 ntBASIC2.53□□□□□ -2
Shmt1P50431 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC2.53□□□□□ -2
Shmt1P50431 AC124739.2-201ENSMUST00000222201 109 ntBASIC2.53□□□□□ -2
Shmt1P50431 Gm24449-201ENSMUST00000083985 106 ntBASIC2.53□□□□□ -2
Shmt1P50431 Gm37566-201ENSMUST00000192363 4355 ntBASIC2.53□□□□□ -2
Shmt1P50431 Snora36b-201ENSMUST00000104383 132 ntBASIC2.52□□□□□ -2.01
Shmt1P50431 Gm12513-201ENSMUST00000118617 352 ntBASIC2.52□□□□□ -2.01
Shmt1P50431 Gm25945-201ENSMUST00000122484 135 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 205.8 ms