Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 AC133598.3-201ENSMUST00000224322 568 ntBASIC2.23□□□□□ -2.05
Ercc3P49135 AC168056.1-201ENSMUST00000225270 180 ntBASIC2.23□□□□□ -2.05
Ercc3P49135 Gm10092-201ENSMUST00000077110 180 ntBASIC2.23□□□□□ -2.05
Ercc3P49135 Gm22358-201ENSMUST00000082877 122 ntBASIC2.23□□□□□ -2.05
Ercc3P49135 Mirlet7c-1-201ENSMUST00000083623 94 ntBASIC2.23□□□□□ -2.05
Ercc3P49135 Gm25188-201ENSMUST00000083913 122 ntBASIC2.23□□□□□ -2.05
Ercc3P49135 Olfr136-205ENSMUST00000216963 1821 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
Ercc3P49135 Gm37602-201ENSMUST00000195187 3310 ntBASIC2.23□□□□□ -2.05
Ercc3P49135 AC164297.1-201ENSMUST00000224484 1561 ntBASIC2.23□□□□□ -2.05
Ercc3P49135 Mir3096-201ENSMUST00000116685 71 ntBASIC2.22□□□□□ -2.05
Ercc3P49135 Gm25914-201ENSMUST00000157618 153 ntBASIC2.22□□□□□ -2.05
Ercc3P49135 Gm23047-201ENSMUST00000177661 94 ntBASIC2.22□□□□□ -2.05
Ercc3P49135 Mir6336-201ENSMUST00000183581 130 ntBASIC2.22□□□□□ -2.05
Ercc3P49135 Gm27545-201ENSMUST00000184755 202 ntBASIC2.22□□□□□ -2.05
Ercc3P49135 AC125167.1-201ENSMUST00000198698 141 ntBASIC2.22□□□□□ -2.05
Ercc3P49135 Olfr454-ps1-201ENSMUST00000205206 348 ntBASIC2.22□□□□□ -2.05
Ercc3P49135 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC2.22□□□□□ -2.05
Ercc3P49135 Gm24966-201ENSMUST00000082443 79 ntBASIC2.22□□□□□ -2.05
Ercc3P49135 Gm24165-201ENSMUST00000082718 128 ntBASIC2.22□□□□□ -2.05
Ercc3P49135 Gm26495-201ENSMUST00000083152 137 ntBASIC2.22□□□□□ -2.05
Ercc3P49135 Rny1-201ENSMUST00000083767 112 ntBASIC2.22□□□□□ -2.05
Ercc3P49135 Gm22723-201ENSMUST00000083820 129 ntBASIC2.22□□□□□ -2.05
Ercc3P49135 Gm23039-201ENSMUST00000083870 161 ntBASIC2.22□□□□□ -2.05
Ercc3P49135 Agmo-201ENSMUST00000049874 2423 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
Ercc3P49135 Gm24423-201ENSMUST00000101982 106 ntBASIC2.21□□□□□ -2.06
Ercc3P49135 Mir293-201ENSMUST00000104841 80 ntBASIC2.21□□□□□ -2.06
Ercc3P49135 Gm14709-201ENSMUST00000121225 304 ntBASIC2.21□□□□□ -2.06
Ercc3P49135 n-R5s150-201ENSMUST00000122705 108 ntBASIC2.21□□□□□ -2.06
Ercc3P49135 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC2.21□□□□□ -2.06
Ercc3P49135 Gm25664-201ENSMUST00000157697 107 ntBASIC2.21□□□□□ -2.06
Ercc3P49135 Mup-ps11-201ENSMUST00000178040 545 ntBASIC2.21□□□□□ -2.06
Ercc3P49135 Mup-ps3-201ENSMUST00000178315 545 ntBASIC2.21□□□□□ -2.06
Ercc3P49135 Mir6388-201ENSMUST00000184417 75 ntBASIC2.21□□□□□ -2.06
Ercc3P49135 Gm44408-201ENSMUST00000200205 66 ntBASIC2.21□□□□□ -2.06
Ercc3P49135 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC2.21□□□□□ -2.06
Ercc3P49135 AC144671.1-201ENSMUST00000215265 99 ntBASIC2.21□□□□□ -2.06
Ercc3P49135 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
Ercc3P49135 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC2.21□□□□□ -2.06
Ercc3P49135 Gm43473-201ENSMUST00000200442 5997 ntBASIC2.2□□□□□ -2.06
Ercc3P49135 Gm23289-201ENSMUST00000175615 108 ntBASIC2.2□□□□□ -2.06
Ercc3P49135 Snora15-201ENSMUST00000177461 131 ntBASIC2.2□□□□□ -2.06
Ercc3P49135 Gm22450-201ENSMUST00000179641 107 ntBASIC2.2□□□□□ -2.06
Ercc3P49135 Gm25473-201ENSMUST00000180191 107 ntBASIC2.2□□□□□ -2.06
Ercc3P49135 Gm27402-201ENSMUST00000183890 120 ntBASIC2.2□□□□□ -2.06
Ercc3P49135 Mir6419-201ENSMUST00000184784 113 ntBASIC2.2□□□□□ -2.06
Ercc3P49135 Mir6540-201ENSMUST00000184886 108 ntBASIC2.2□□□□□ -2.06
Ercc3P49135 Gm44491-201ENSMUST00000196794 96 ntBASIC2.2□□□□□ -2.06
Ercc3P49135 Gm24856-201ENSMUST00000082809 107 ntBASIC2.2□□□□□ -2.06
Ercc3P49135 Gm24536-201ENSMUST00000083144 107 ntBASIC2.2□□□□□ -2.06
Ercc3P49135 Gm26071-201ENSMUST00000083261 107 ntBASIC2.2□□□□□ -2.06
Ercc3P49135 Gm24521-201ENSMUST00000083958 107 ntBASIC2.2□□□□□ -2.06
Ercc3P49135 Olfr143-202ENSMUST00000213129 3449 ntAPPRIS ALT2 TSL 5 BASIC2.2□□□□□ -2.06
Ercc3P49135 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
Ercc3P49135 Gm25615-201ENSMUST00000177836 94 ntBASIC2.19□□□□□ -2.06
Ercc3P49135 Gm43427-201ENSMUST00000198188 331 ntBASIC2.19□□□□□ -2.06
Ercc3P49135 Gm42774-201ENSMUST00000198854 283 ntBASIC2.19□□□□□ -2.06
Ercc3P49135 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
Ercc3P49135 Gm45907-201ENSMUST00000213023 193 ntBASIC2.19□□□□□ -2.06
Ercc3P49135 Snora3-201ENSMUST00000083082 132 ntBASIC2.19□□□□□ -2.06
Ercc3P49135 Gm36669-201ENSMUST00000201757 3650 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
Ercc3P49135 Gm29106-201ENSMUST00000186264 4012 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
Ercc3P49135 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
Ercc3P49135 Gm22784-201ENSMUST00000104088 132 ntBASIC2.18□□□□□ -2.06
Ercc3P49135 Gm23492-201ENSMUST00000116837 115 ntBASIC2.18□□□□□ -2.06
Ercc3P49135 Gm12797-201ENSMUST00000118645 273 ntBASIC2.18□□□□□ -2.06
Ercc3P49135 Gm14846-201ENSMUST00000121868 216 ntBASIC2.18□□□□□ -2.06
Ercc3P49135 Gm25333-201ENSMUST00000158035 246 ntBASIC2.18□□□□□ -2.06
Ercc3P49135 Gm24394-201ENSMUST00000158141 123 ntBASIC2.18□□□□□ -2.06
Ercc3P49135 Gm24510-201ENSMUST00000174965 94 ntBASIC2.18□□□□□ -2.06
Ercc3P49135 Mir3057-201ENSMUST00000175040 91 ntBASIC2.18□□□□□ -2.06
Ercc3P49135 Gm25024-201ENSMUST00000179667 104 ntBASIC2.18□□□□□ -2.06
Ercc3P49135 Mir7679-201ENSMUST00000183379 63 ntBASIC2.18□□□□□ -2.06
Ercc3P49135 Gm37146-201ENSMUST00000192572 463 ntTSL 3 BASIC2.18□□□□□ -2.06
Ercc3P49135 Olfr375-ps1-201ENSMUST00000198131 249 ntBASIC2.18□□□□□ -2.06
Ercc3P49135 Gm23370-201ENSMUST00000199545 130 ntBASIC2.18□□□□□ -2.06
Ercc3P49135 Gm24204-201ENSMUST00000082950 107 ntBASIC2.18□□□□□ -2.06
Ercc3P49135 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
Ercc3P49135 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Ercc3P49135 Gm25938-201ENSMUST00000104139 166 ntBASIC2.17□□□□□ -2.06
Ercc3P49135 Gm24392-201ENSMUST00000158136 103 ntBASIC2.17□□□□□ -2.06
Ercc3P49135 Gm24667-201ENSMUST00000158938 103 ntBASIC2.17□□□□□ -2.06
Ercc3P49135 Gm16162-201ENSMUST00000162296 297 ntBASIC2.17□□□□□ -2.06
Ercc3P49135 Gm25235-201ENSMUST00000179933 107 ntBASIC2.17□□□□□ -2.06
Ercc3P49135 Gm29657-201ENSMUST00000189807 342 ntBASIC2.17□□□□□ -2.06
Ercc3P49135 AC126691.1-201ENSMUST00000226534 202 ntBASIC2.17□□□□□ -2.06
Ercc3P49135 Gm25636-201ENSMUST00000082666 133 ntBASIC2.17□□□□□ -2.06
Ercc3P49135 Gm26922-201ENSMUST00000082687 72 ntBASIC2.17□□□□□ -2.06
Ercc3P49135 Gm10360-201ENSMUST00000097219 272 ntBASIC2.17□□□□□ -2.06
Ercc3P49135 Olfr1225-203ENSMUST00000217054 5517 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
Ercc3P49135 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Ercc3P49135 Gm15861-201ENSMUST00000120979 339 ntBASIC2.16□□□□□ -2.06
Ercc3P49135 Gm26426-201ENSMUST00000177866 123 ntBASIC2.16□□□□□ -2.06
Ercc3P49135 Gm26060-201ENSMUST00000180094 123 ntBASIC2.16□□□□□ -2.06
Ercc3P49135 Gm45859-201ENSMUST00000212794 214 ntBASIC2.16□□□□□ -2.06
Ercc3P49135 Traj37-201ENSMUST00000103705 60 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
Ercc3P49135 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
Ercc3P49135 Gm24283-201ENSMUST00000104233 107 ntBASIC2.15□□□□□ -2.07
Ercc3P49135 Mir881-201ENSMUST00000104844 78 ntBASIC2.15□□□□□ -2.07
Ercc3P49135 Gm12512-201ENSMUST00000119620 217 ntBASIC2.15□□□□□ -2.07
Ercc3P49135 Gm23656-201ENSMUST00000122626 112 ntBASIC2.15□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 85.6 ms