Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm22996-201ENSMUST00000180236 79 ntBASIC3.2□□□□□ -1.9
Rfx1P48377 Gm27786-201ENSMUST00000184337 70 ntBASIC3.2□□□□□ -1.9
Rfx1P48377 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Rfx1P48377 Gm37116-201ENSMUST00000195161 147 ntBASIC3.2□□□□□ -1.9
Rfx1P48377 Gm44903-201ENSMUST00000206840 130 ntBASIC3.2□□□□□ -1.9
Rfx1P48377 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Rfx1P48377 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Rfx1P48377 Olfr800-202ENSMUST00000217094 3831 ntAPPRIS P1 TSL 3 BASIC3.19□□□□□ -1.9
Rfx1P48377 Vmn1r185-202ENSMUST00000226694 5656 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Rfx1P48377 Gm23911-201ENSMUST00000104596 134 ntBASIC3.19□□□□□ -1.9
Rfx1P48377 Gm25323-201ENSMUST00000122555 103 ntBASIC3.19□□□□□ -1.9
Rfx1P48377 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC3.19□□□□□ -1.9
Rfx1P48377 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Rfx1P48377 Gm44633-201ENSMUST00000205925 439 ntTSL 3 BASIC3.19□□□□□ -1.9
Rfx1P48377 AC144783.2-201ENSMUST00000219089 195 ntBASIC3.19□□□□□ -1.9
Rfx1P48377 Olfr777-202ENSMUST00000204573 5407 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Rfx1P48377 Uty-201ENSMUST00000069309 5208 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
Rfx1P48377 Olfr1484-205ENSMUST00000216369 3764 ntTSL 5 BASIC3.18□□□□□ -1.9
Rfx1P48377 Gm28358-202ENSMUST00000189292 223 ntBASIC3.18□□□□□ -1.9
Rfx1P48377 Rgs18-201ENSMUST00000027603 2031 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Rfx1P48377 Vmn2r70-201ENSMUST00000168230 2565 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Rfx1P48377 Gm24049-201ENSMUST00000102409 100 ntBASIC3.17□□□□□ -1.9
Rfx1P48377 Gm23772-201ENSMUST00000104433 102 ntBASIC3.17□□□□□ -1.9
Rfx1P48377 Gm24068-201ENSMUST00000104513 132 ntBASIC3.17□□□□□ -1.9
Rfx1P48377 Gm23080-201ENSMUST00000157846 103 ntBASIC3.17□□□□□ -1.9
Rfx1P48377 Gm25371-201ENSMUST00000158162 101 ntBASIC3.17□□□□□ -1.9
Rfx1P48377 Gm10351-201ENSMUST00000087694 125 ntBASIC3.17□□□□□ -1.9
Rfx1P48377 Olfr1240-202ENSMUST00000216123 4603 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Rfx1P48377 Gm43540-201ENSMUST00000196320 3848 ntBASIC3.17□□□□□ -1.9
Rfx1P48377 Vmn1r185-211ENSMUST00000228467 6915 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Rfx1P48377 Gm9251-201ENSMUST00000197202 628 ntBASIC3.16□□□□□ -1.9
Rfx1P48377 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC3.16□□□□□ -1.9
Rfx1P48377 AC168266.1-201ENSMUST00000216024 226 ntBASIC3.16□□□□□ -1.9
Rfx1P48377 Mir301-201ENSMUST00000083655 86 ntBASIC3.16□□□□□ -1.9
Rfx1P48377 n-R5s183-201ENSMUST00000083939 115 ntBASIC3.16□□□□□ -1.9
Rfx1P48377 Gm14327-201ENSMUST00000099001 192 ntTSL 5 BASIC3.16□□□□□ -1.9
Rfx1P48377 Slitrk6-201ENSMUST00000078386 4240 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
Rfx1P48377 Gm25308-201ENSMUST00000104171 158 ntBASIC3.15□□□□□ -1.91
Rfx1P48377 Gm24375-201ENSMUST00000104397 132 ntBASIC3.15□□□□□ -1.91
Rfx1P48377 Gm25500-201ENSMUST00000104426 123 ntBASIC3.15□□□□□ -1.91
Rfx1P48377 DQ267100-201ENSMUST00000122600 72 ntBASIC3.15□□□□□ -1.91
Rfx1P48377 Gm26897-201ENSMUST00000180627 93 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Rfx1P48377 AC164561.1-201ENSMUST00000220414 115 ntBASIC3.15□□□□□ -1.91
Rfx1P48377 Gm25136-201ENSMUST00000083253 115 ntBASIC3.15□□□□□ -1.91
Rfx1P48377 Mir429-201ENSMUST00000083493 83 ntBASIC3.15□□□□□ -1.91
Rfx1P48377 Mir466b-3-201ENSMUST00000103806 81 ntBASIC3.14□□□□□ -1.91
Rfx1P48377 Gm25828-201ENSMUST00000157087 95 ntBASIC3.14□□□□□ -1.91
Rfx1P48377 Gm22279-201ENSMUST00000157200 93 ntBASIC3.14□□□□□ -1.91
Rfx1P48377 Gm22612-201ENSMUST00000158293 101 ntBASIC3.14□□□□□ -1.91
Rfx1P48377 H3f3aos-202ENSMUST00000159740 229 ntTSL 5 BASIC3.14□□□□□ -1.91
Rfx1P48377 Gm25996-201ENSMUST00000175393 117 ntBASIC3.14□□□□□ -1.91
Rfx1P48377 Gm29603-201ENSMUST00000186792 334 ntBASIC3.14□□□□□ -1.91
Rfx1P48377 Gm42960-201ENSMUST00000202160 241 ntBASIC3.14□□□□□ -1.91
Rfx1P48377 AC168056.1-201ENSMUST00000225270 180 ntBASIC3.14□□□□□ -1.91
Rfx1P48377 Olfr1450-202ENSMUST00000213587 2872 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Rfx1P48377 N4bp2l2-201ENSMUST00000118316 8982 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Rfx1P48377 Olfr166-203ENSMUST00000216465 4371 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Rfx1P48377 AC152951.2-201ENSMUST00000218293 3587 ntBASIC3.13□□□□□ -1.91
Rfx1P48377 Muc16-204ENSMUST00000208663 25437 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Rfx1P48377 Zfp953-201ENSMUST00000081582 4677 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Rfx1P48377 Mir669b-201ENSMUST00000102172 97 ntBASIC3.13□□□□□ -1.91
Rfx1P48377 Gm22939-201ENSMUST00000103958 131 ntBASIC3.13□□□□□ -1.91
Rfx1P48377 Snora36b-201ENSMUST00000104383 132 ntBASIC3.13□□□□□ -1.91
Rfx1P48377 Gm9009-201ENSMUST00000117321 326 ntBASIC3.13□□□□□ -1.91
Rfx1P48377 Gm16021-201ENSMUST00000121176 219 ntBASIC3.13□□□□□ -1.91
Rfx1P48377 Gm25270-201ENSMUST00000122606 138 ntBASIC3.13□□□□□ -1.91
Rfx1P48377 Gm23599-201ENSMUST00000157261 251 ntBASIC3.13□□□□□ -1.91
Rfx1P48377 Gm23854-201ENSMUST00000158378 108 ntBASIC3.13□□□□□ -1.91
Rfx1P48377 Gm26157-201ENSMUST00000158974 126 ntBASIC3.13□□□□□ -1.91
Rfx1P48377 Mir6916-201ENSMUST00000184514 63 ntBASIC3.13□□□□□ -1.91
Rfx1P48377 Ighv1-1-201ENSMUST00000194912 291 ntBASIC3.13□□□□□ -1.91
Rfx1P48377 Igkv4-60-201ENSMUST00000200639 358 ntBASIC3.13□□□□□ -1.91
Rfx1P48377 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC3.13□□□□□ -1.91
Rfx1P48377 Gm44921-201ENSMUST00000205290 301 ntBASIC3.13□□□□□ -1.91
Rfx1P48377 AC130477.2-201ENSMUST00000228158 274 ntBASIC3.13□□□□□ -1.91
Rfx1P48377 Gm13136-201ENSMUST00000121031 2950 ntBASIC3.13□□□□□ -1.91
Rfx1P48377 Gm26411-201ENSMUST00000157668 107 ntBASIC3.12□□□□□ -1.91
Rfx1P48377 Gm24879-201ENSMUST00000158386 143 ntBASIC3.12□□□□□ -1.91
Rfx1P48377 Mir7242-201ENSMUST00000183710 79 ntBASIC3.12□□□□□ -1.91
Rfx1P48377 Gm25814-201ENSMUST00000082754 107 ntBASIC3.12□□□□□ -1.91
Rfx1P48377 Gm24232-201ENSMUST00000104314 132 ntBASIC3.11□□□□□ -1.91
Rfx1P48377 Tnfaip8-206ENSMUST00000145726 632 ntTSL 3 BASIC3.11□□□□□ -1.91
Rfx1P48377 Gm24787-201ENSMUST00000157380 123 ntBASIC3.11□□□□□ -1.91
Rfx1P48377 Mir6350-201ENSMUST00000183639 105 ntBASIC3.11□□□□□ -1.91
Rfx1P48377 Gm28282-201ENSMUST00000186072 186 ntBASIC3.11□□□□□ -1.91
Rfx1P48377 CT485607.2-201ENSMUST00000214650 91 ntBASIC3.11□□□□□ -1.91
Rfx1P48377 Gm23947-201ENSMUST00000093636 107 ntBASIC3.11□□□□□ -1.91
Rfx1P48377 Olfr623-202ENSMUST00000213840 3980 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Rfx1P48377 Gm18795-201ENSMUST00000222371 3266 ntTSL 5 BASIC3.11□□□□□ -1.91
Rfx1P48377 Olfr229-202ENSMUST00000214904 3125 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Rfx1P48377 AC153966.1-201ENSMUST00000220106 3764 ntBASIC3.1□□□□□ -1.91
Rfx1P48377 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Rfx1P48377 Snord90-201ENSMUST00000104568 111 ntBASIC3.1□□□□□ -1.91
Rfx1P48377 Snord100-201ENSMUST00000116836 74 ntBASIC3.1□□□□□ -1.91
Rfx1P48377 Gm23600-201ENSMUST00000157260 71 ntBASIC3.1□□□□□ -1.91
Rfx1P48377 Gm25280-201ENSMUST00000157269 101 ntBASIC3.1□□□□□ -1.91
Rfx1P48377 Gm25882-201ENSMUST00000157784 85 ntBASIC3.1□□□□□ -1.91
Rfx1P48377 Gm22349-201ENSMUST00000157864 107 ntBASIC3.1□□□□□ -1.91
Rfx1P48377 Mir6405-201ENSMUST00000184584 124 ntBASIC3.1□□□□□ -1.91
Rfx1P48377 Mir3969-201ENSMUST00000197106 92 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 84.1 ms