Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 AC156795.1-201ENSMUST00000214655 414 ntBASIC-0.81□□□□□ -2.54
HttP42859 Gm23462-201ENSMUST00000083264 104 ntBASIC-0.81□□□□□ -2.54
HttP42859 Gm13596-201ENSMUST00000153354 292 ntTSL 5 BASIC-0.82□□□□□ -2.54
HttP42859 Gm22265-201ENSMUST00000082947 116 ntBASIC-0.82□□□□□ -2.54
HttP42859 Mir1298-201ENSMUST00000116681 98 ntBASIC-0.82□□□□□ -2.54
HttP42859 Gm11116-201ENSMUST00000113257 54 ntAPPRIS P1 TSL 5 BASIC-0.82□□□□□ -2.54
HttP42859 Gm14671-201ENSMUST00000121790 262 ntBASIC-0.82□□□□□ -2.54
HttP42859 Gm26713-201ENSMUST00000181827 627 ntTSL 1 (best) BASIC-0.82□□□□□ -2.54
HttP42859 Gm7495-201ENSMUST00000215099 426 ntBASIC-0.82□□□□□ -2.54
HttP42859 Gm24582-201ENSMUST00000103967 103 ntBASIC-0.83□□□□□ -2.54
HttP42859 Gm23989-201ENSMUST00000117030 66 ntBASIC-0.83□□□□□ -2.54
HttP42859 Gm12591-201ENSMUST00000122407 1177 ntBASIC-0.83□□□□□ -2.54
HttP42859 Gm15878-201ENSMUST00000127561 306 ntBASIC-0.83□□□□□ -2.54
HttP42859 Gm29247-202ENSMUST00000148542 571 ntTSL 2 BASIC-0.83□□□□□ -2.54
HttP42859 Gm22838-201ENSMUST00000158437 99 ntBASIC-0.83□□□□□ -2.54
HttP42859 Gm28643-201ENSMUST00000188811 356 ntTSL 5 BASIC-0.83□□□□□ -2.54
HttP42859 Gm43140-201ENSMUST00000197317 456 ntTSL 2 BASIC-0.83□□□□□ -2.54
HttP42859 Olfr795-ps1-201ENSMUST00000205245 763 ntBASIC-0.83□□□□□ -2.54
HttP42859 Gm23387-201ENSMUST00000158586 107 ntBASIC-0.83□□□□□ -2.54
HttP42859 Igkv13-62-1-201ENSMUST00000198690 317 ntBASIC-0.83□□□□□ -2.54
HttP42859 Gm12770-201ENSMUST00000121734 462 ntBASIC-0.84□□□□□ -2.54
HttP42859 Gm2020-201ENSMUST00000145242 579 ntBASIC-0.84□□□□□ -2.54
HttP42859 Gm23996-201ENSMUST00000158062 131 ntBASIC-0.84□□□□□ -2.54
HttP42859 Mir344-2-201ENSMUST00000175446 80 ntBASIC-0.84□□□□□ -2.54
HttP42859 Gm25750-201ENSMUST00000175483 112 ntBASIC-0.84□□□□□ -2.54
HttP42859 Gm22252-201ENSMUST00000179316 79 ntBASIC-0.84□□□□□ -2.54
HttP42859 Sult1c2-ps2-201ENSMUST00000196414 276 ntBASIC-0.84□□□□□ -2.54
HttP42859 AC156560.1-201ENSMUST00000221425 256 ntBASIC-0.84□□□□□ -2.54
HttP42859 Gm24163-201ENSMUST00000093660 132 ntBASIC-0.84□□□□□ -2.54
HttP42859 CT954323.1-201ENSMUST00000222774 229 ntBASIC-0.84□□□□□ -2.54
HttP42859 Vmn1r86-201ENSMUST00000094828 951 ntAPPRIS P2 BASIC-0.84□□□□□ -2.54
HttP42859 Gm23118-201ENSMUST00000122657 187 ntBASIC-0.84□□□□□ -2.54
HttP42859 Gm20415-201ENSMUST00000172877 423 ntBASIC-0.84□□□□□ -2.54
HttP42859 Gm25693-201ENSMUST00000175443 85 ntBASIC-0.84□□□□□ -2.54
HttP42859 Gm24508-201ENSMUST00000180104 107 ntBASIC-0.84□□□□□ -2.54
HttP42859 Gm28648-201ENSMUST00000190092 343 ntBASIC-0.84□□□□□ -2.54
HttP42859 AC164612.2-202ENSMUST00000216314 253 ntBASIC-0.84□□□□□ -2.54
HttP42859 AC154552.7-201ENSMUST00000222824 156 ntBASIC-0.84□□□□□ -2.54
HttP42859 Gm22019-201ENSMUST00000104359 96 ntBASIC-0.85□□□□□ -2.55
HttP42859 Gm14600-201ENSMUST00000121032 630 ntBASIC-0.85□□□□□ -2.55
HttP42859 Gm11254-201ENSMUST00000122368 653 ntBASIC-0.85□□□□□ -2.55
HttP42859 Gm24843-201ENSMUST00000158682 76 ntBASIC-0.85□□□□□ -2.55
HttP42859 Gm18417-201ENSMUST00000176564 648 ntBASIC-0.85□□□□□ -2.55
HttP42859 mt-Nd2-201ENSMUST00000082396 1038 ntAPPRIS P1 BASIC-0.85□□□□□ -2.55
HttP42859 Mir7j-201ENSMUST00000184427 122 ntBASIC-0.85□□□□□ -2.55
HttP42859 Olfr783-ps1-201ENSMUST00000205105 441 ntBASIC-0.85□□□□□ -2.55
HttP42859 Gm22496-201ENSMUST00000104493 88 ntBASIC-0.86□□□□□ -2.55
HttP42859 Gm25783-201ENSMUST00000122525 190 ntBASIC-0.86□□□□□ -2.55
HttP42859 Gm15485-201ENSMUST00000149095 258 ntTSL 3 BASIC-0.86□□□□□ -2.55
HttP42859 Gm27396-201ENSMUST00000157708 58 ntBASIC-0.86□□□□□ -2.55
HttP42859 Gm25175-201ENSMUST00000178712 79 ntBASIC-0.86□□□□□ -2.55
HttP42859 Gm37743-201ENSMUST00000194645 376 ntBASIC-0.86□□□□□ -2.55
HttP42859 CT030684.2-201ENSMUST00000228946 826 ntBASIC-0.86□□□□□ -2.55
HttP42859 Gm10717-201ENSMUST00000075573 684 ntTSL 5 BASIC-0.86□□□□□ -2.55
HttP42859 Gm11334-201ENSMUST00000121969 156 ntBASIC-0.86□□□□□ -2.55
HttP42859 Gm11575-201ENSMUST00000122243 228 ntBASIC-0.86□□□□□ -2.55
HttP42859 Gm23253-201ENSMUST00000157441 104 ntBASIC-0.86□□□□□ -2.55
HttP42859 Gm22747-201ENSMUST00000082495 107 ntBASIC-0.86□□□□□ -2.55
HttP42859 Gm12044-201ENSMUST00000120335 213 ntBASIC-0.86□□□□□ -2.55
HttP42859 Gm15654-201ENSMUST00000152660 300 ntBASIC-0.86□□□□□ -2.55
HttP42859 Gm29591-201ENSMUST00000188215 357 ntTSL 5 BASIC-0.86□□□□□ -2.55
HttP42859 Gm22031-201ENSMUST00000116945 126 ntBASIC-0.87□□□□□ -2.55
HttP42859 Gm22279-201ENSMUST00000157200 93 ntBASIC-0.87□□□□□ -2.55
HttP42859 Gm24168-201ENSMUST00000178825 107 ntBASIC-0.87□□□□□ -2.55
HttP42859 Gm45489-201ENSMUST00000211753 443 ntTSL 3 BASIC-0.87□□□□□ -2.55
HttP42859 Gm39473-201ENSMUST00000223498 522 ntTSL 3 BASIC-0.87□□□□□ -2.55
HttP42859 Mir377-201ENSMUST00000083504 68 ntBASIC-0.87□□□□□ -2.55
HttP42859 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC-0.87□□□□□ -2.55
HttP42859 Gm24430-201ENSMUST00000104077 104 ntBASIC-0.87□□□□□ -2.55
HttP42859 Gm24283-201ENSMUST00000104233 107 ntBASIC-0.87□□□□□ -2.55
HttP42859 Gm26415-201ENSMUST00000157673 292 ntBASIC-0.87□□□□□ -2.55
HttP42859 Mir1933-201ENSMUST00000158930 88 ntBASIC-0.87□□□□□ -2.55
HttP42859 Mirlet7a-2-201ENSMUST00000175029 96 ntBASIC-0.87□□□□□ -2.55
HttP42859 Gm27522-201ENSMUST00000183949 230 ntBASIC-0.87□□□□□ -2.55
HttP42859 CT030194.2-201ENSMUST00000225752 379 ntBASIC-0.87□□□□□ -2.55
HttP42859 Gm23239-201ENSMUST00000083006 181 ntBASIC-0.87□□□□□ -2.55
HttP42859 Gm13967-201ENSMUST00000120404 380 ntBASIC-0.88□□□□□ -2.55
HttP42859 Gm34073-201ENSMUST00000195736 212 ntBASIC-0.88□□□□□ -2.55
HttP42859 Gm22553-201ENSMUST00000157797 295 ntBASIC-0.88□□□□□ -2.55
HttP42859 Gm28700-201ENSMUST00000187614 579 ntBASIC-0.88□□□□□ -2.55
HttP42859 Zfp934-201ENSMUST00000082203 993 ntTSL 5 BASIC-0.88□□□□□ -2.55
HttP42859 Gm26104-201ENSMUST00000157250 108 ntBASIC-0.89□□□□□ -2.55
HttP42859 Gm6293-201ENSMUST00000050339 195 ntBASIC-0.89□□□□□ -2.55
HttP42859 Gm24460-201ENSMUST00000082731 106 ntBASIC-0.89□□□□□ -2.55
HttP42859 Gm24510-201ENSMUST00000174965 94 ntBASIC-0.89□□□□□ -2.55
HttP42859 Vmn1r-ps149-201ENSMUST00000176997 183 ntBASIC-0.89□□□□□ -2.55
HttP42859 Gm12106-201ENSMUST00000116006 1200 ntBASIC-0.89□□□□□ -2.55
HttP42859 n-R5s188-201ENSMUST00000122646 105 ntBASIC-0.89□□□□□ -2.55
HttP42859 Gm28256-201ENSMUST00000188953 139 ntBASIC-0.89□□□□□ -2.55
HttP42859 Gm28559-201ENSMUST00000190532 139 ntBASIC-0.89□□□□□ -2.55
HttP42859 Gm28992-201ENSMUST00000190534 139 ntBASIC-0.89□□□□□ -2.55
HttP42859 AC163295.1-201ENSMUST00000227840 314 ntBASIC-0.89□□□□□ -2.55
HttP42859 Gm12105-201ENSMUST00000120846 779 ntBASIC-0.9□□□□□ -2.55
HttP42859 Gm24400-201ENSMUST00000157865 107 ntBASIC-0.9□□□□□ -2.55
HttP42859 Mir1931-201ENSMUST00000158589 119 ntBASIC-0.9□□□□□ -2.55
HttP42859 Gm22263-201ENSMUST00000180060 104 ntBASIC-0.9□□□□□ -2.55
HttP42859 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC-0.9□□□□□ -2.55
HttP42859 Gm14517-201ENSMUST00000119040 337 ntBASIC-0.9□□□□□ -2.55
HttP42859 Gm24910-201ENSMUST00000157289 272 ntBASIC-0.9□□□□□ -2.55
HttP42859 Gm25059-201ENSMUST00000157367 117 ntBASIC-0.9□□□□□ -2.55
Retrieved 100 of 76,532 protein–RNA pairs in 156.7 ms