Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm23907-201ENSMUST00000104595 189 ntBASIC1.57□□□□□ -2.16
Traf1P39428 Gm23336-201ENSMUST00000117023 123 ntBASIC1.57□□□□□ -2.16
Traf1P39428 Gm23714-201ENSMUST00000179259 105 ntBASIC1.57□□□□□ -2.16
Traf1P39428 Ranbp2-ps7-201ENSMUST00000183924 384 ntBASIC1.57□□□□□ -2.16
Traf1P39428 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC1.57□□□□□ -2.16
Traf1P39428 AC154636.2-201ENSMUST00000222538 161 ntBASIC1.57□□□□□ -2.16
Traf1P39428 Gm25759-201ENSMUST00000103988 129 ntBASIC1.56□□□□□ -2.16
Traf1P39428 Gm25884-201ENSMUST00000157782 62 ntBASIC1.56□□□□□ -2.16
Traf1P39428 Gm26038-201ENSMUST00000158151 106 ntBASIC1.56□□□□□ -2.16
Traf1P39428 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC1.56□□□□□ -2.16
Traf1P39428 Mir3098-201ENSMUST00000175416 87 ntBASIC1.56□□□□□ -2.16
Traf1P39428 Tmsb15b2-202ENSMUST00000180194 243 ntAPPRIS P1 TSL 3 BASIC1.56□□□□□ -2.16
Traf1P39428 AC139186.1-201ENSMUST00000197610 94 ntBASIC1.56□□□□□ -2.16
Traf1P39428 CT025689.3-201ENSMUST00000223817 301 ntBASIC1.56□□□□□ -2.16
Traf1P39428 Mir155-201ENSMUST00000083463 65 ntBASIC1.56□□□□□ -2.16
Traf1P39428 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
Traf1P39428 Gm14917-201ENSMUST00000118872 2105 ntBASIC1.55□□□□□ -2.16
Traf1P39428 Olfr188-ps1-201ENSMUST00000205766 4706 ntTSL 5 BASIC1.55□□□□□ -2.16
Traf1P39428 Mir343-201ENSMUST00000102360 75 ntBASIC1.55□□□□□ -2.16
Traf1P39428 Gm26339-201ENSMUST00000102368 99 ntBASIC1.55□□□□□ -2.16
Traf1P39428 Gm24283-201ENSMUST00000104233 107 ntBASIC1.55□□□□□ -2.16
Traf1P39428 Gm25495-201ENSMUST00000104431 131 ntBASIC1.55□□□□□ -2.16
Traf1P39428 Gm22279-201ENSMUST00000157200 93 ntBASIC1.55□□□□□ -2.16
Traf1P39428 Gm23759-201ENSMUST00000158351 268 ntBASIC1.55□□□□□ -2.16
Traf1P39428 Gm37801-201ENSMUST00000194754 274 ntBASIC1.55□□□□□ -2.16
Traf1P39428 Gm42719-201ENSMUST00000197393 355 ntBASIC1.55□□□□□ -2.16
Traf1P39428 Gm44177-201ENSMUST00000204338 2667 ntBASIC1.54□□□□□ -2.16
Traf1P39428 Mir767-201ENSMUST00000103256 107 ntBASIC1.54□□□□□ -2.16
Traf1P39428 Gm25781-201ENSMUST00000122527 84 ntBASIC1.54□□□□□ -2.16
Traf1P39428 Gm22814-201ENSMUST00000157452 104 ntBASIC1.54□□□□□ -2.16
Traf1P39428 Traj60-201ENSMUST00000167781 54 ntBASIC1.54□□□□□ -2.16
Traf1P39428 AC125020.2-201ENSMUST00000218894 348 ntBASIC1.54□□□□□ -2.16
Traf1P39428 AC192333.1-201ENSMUST00000224573 376 ntBASIC1.54□□□□□ -2.16
Traf1P39428 AC098718.1-201ENSMUST00000226166 175 ntBASIC1.54□□□□□ -2.16
Traf1P39428 Gm26111-201ENSMUST00000083969 106 ntBASIC1.54□□□□□ -2.16
Traf1P39428 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC1.53□□□□□ -2.16
Traf1P39428 Gm26135-201ENSMUST00000101993 72 ntBASIC1.53□□□□□ -2.16
Traf1P39428 Gm11420-201ENSMUST00000120047 402 ntBASIC1.53□□□□□ -2.16
Traf1P39428 Gm14846-201ENSMUST00000121868 216 ntBASIC1.53□□□□□ -2.16
Traf1P39428 Gm24737-201ENSMUST00000158861 100 ntBASIC1.53□□□□□ -2.16
Traf1P39428 Snord50b-201ENSMUST00000178497 72 ntBASIC1.53□□□□□ -2.16
Traf1P39428 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
Traf1P39428 Tmem167-ps2-201ENSMUST00000190251 214 ntBASIC1.53□□□□□ -2.16
Traf1P39428 Gm37763-201ENSMUST00000193445 120 ntBASIC1.53□□□□□ -2.16
Traf1P39428 Gm42862-201ENSMUST00000197494 2621 ntBASIC1.53□□□□□ -2.16
Traf1P39428 Vmn1r-ps6-202ENSMUST00000202526 135 ntTSL 5 BASIC1.53□□□□□ -2.16
Traf1P39428 Olfr1064-ps1-201ENSMUST00000213670 600 ntBASIC1.53□□□□□ -2.16
Traf1P39428 AC163033.1-201ENSMUST00000218608 157 ntBASIC1.53□□□□□ -2.16
Traf1P39428 Gm12309-201ENSMUST00000119889 182 ntBASIC1.52□□□□□ -2.17
Traf1P39428 Gm15214-201ENSMUST00000122155 470 ntBASIC1.52□□□□□ -2.17
Traf1P39428 Gm24440-201ENSMUST00000157236 63 ntBASIC1.52□□□□□ -2.17
Traf1P39428 Gm24915-201ENSMUST00000157288 78 ntBASIC1.52□□□□□ -2.17
Traf1P39428 Gm22944-201ENSMUST00000158662 133 ntBASIC1.52□□□□□ -2.17
Traf1P39428 Gm24512-201ENSMUST00000174963 65 ntBASIC1.52□□□□□ -2.17
Traf1P39428 Gm27894-201ENSMUST00000184177 92 ntBASIC1.52□□□□□ -2.17
Traf1P39428 Rpl23a-ps7-201ENSMUST00000185437 460 ntBASIC1.52□□□□□ -2.17
Traf1P39428 Gm34302-201ENSMUST00000192926 243 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
Traf1P39428 Mir376a-201ENSMUST00000197584 68 ntBASIC1.52□□□□□ -2.17
Traf1P39428 Mir3535-201ENSMUST00000197651 147 ntBASIC1.52□□□□□ -2.17
Traf1P39428 AC116589.4-201ENSMUST00000222390 216 ntBASIC1.52□□□□□ -2.17
Traf1P39428 Gm43960-201ENSMUST00000204249 5020 ntBASIC1.52□□□□□ -2.17
Traf1P39428 Gm18795-202ENSMUST00000223373 2920 ntBASIC1.51□□□□□ -2.17
Traf1P39428 Olfr307-203ENSMUST00000217494 4515 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
Traf1P39428 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC1.51□□□□□ -2.17
Traf1P39428 Gm22883-201ENSMUST00000157376 106 ntBASIC1.51□□□□□ -2.17
Traf1P39428 Mir6240-201ENSMUST00000184281 117 ntBASIC1.51□□□□□ -2.17
Traf1P39428 Snord96a-201ENSMUST00000082791 81 ntBASIC1.51□□□□□ -2.17
Traf1P39428 Gm23245-201ENSMUST00000083370 135 ntBASIC1.51□□□□□ -2.17
Traf1P39428 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
Traf1P39428 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
Traf1P39428 Gm26082-201ENSMUST00000104070 127 ntBASIC1.5□□□□□ -2.17
Traf1P39428 Gm15002-201ENSMUST00000118406 452 ntBASIC1.5□□□□□ -2.17
Traf1P39428 Gm14906-201ENSMUST00000119265 390 ntBASIC1.5□□□□□ -2.17
Traf1P39428 Gm11857-201ENSMUST00000119817 324 ntBASIC1.5□□□□□ -2.17
Traf1P39428 Gm22551-201ENSMUST00000157795 103 ntBASIC1.5□□□□□ -2.17
Traf1P39428 Gm23083-201ENSMUST00000157851 116 ntBASIC1.5□□□□□ -2.17
Traf1P39428 Gm24847-201ENSMUST00000158032 108 ntBASIC1.5□□□□□ -2.17
Traf1P39428 Gm22164-201ENSMUST00000158413 106 ntBASIC1.5□□□□□ -2.17
Traf1P39428 Gm2962-201ENSMUST00000159266 336 ntBASIC1.5□□□□□ -2.17
Traf1P39428 Gm19777-201ENSMUST00000191940 358 ntBASIC1.5□□□□□ -2.17
Traf1P39428 Mir465d-201ENSMUST00000196314 58 ntBASIC1.5□□□□□ -2.17
Traf1P39428 AC145736.2-201ENSMUST00000216305 365 ntBASIC1.5□□□□□ -2.17
Traf1P39428 AC155241.1-201ENSMUST00000222709 415 ntTSL 5 BASIC1.5□□□□□ -2.17
Traf1P39428 AC173482.5-201ENSMUST00000224181 327 ntBASIC1.5□□□□□ -2.17
Traf1P39428 Gm24252-201ENSMUST00000083700 132 ntBASIC1.5□□□□□ -2.17
Traf1P39428 AC153950.1-201ENSMUST00000219916 3238 ntBASIC1.49□□□□□ -2.17
Traf1P39428 Gm24275-201ENSMUST00000116780 146 ntBASIC1.49□□□□□ -2.17
Traf1P39428 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC1.49□□□□□ -2.17
Traf1P39428 Gm24629-201ENSMUST00000122762 89 ntBASIC1.49□□□□□ -2.17
Traf1P39428 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC1.49□□□□□ -2.17
Traf1P39428 Gm29014-201ENSMUST00000191422 326 ntBASIC1.49□□□□□ -2.17
Traf1P39428 Gm37404-201ENSMUST00000195726 359 ntBASIC1.49□□□□□ -2.17
Traf1P39428 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC1.49□□□□□ -2.17
Traf1P39428 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC1.49□□□□□ -2.17
Traf1P39428 Snord1a-201ENSMUST00000083160 74 ntBASIC1.49□□□□□ -2.17
Traf1P39428 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
Traf1P39428 Mir759-201ENSMUST00000103254 98 ntBASIC1.48□□□□□ -2.17
Traf1P39428 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
Traf1P39428 Gm22780-201ENSMUST00000104084 132 ntBASIC1.48□□□□□ -2.17
Traf1P39428 Gm12449-201ENSMUST00000117572 234 ntBASIC1.48□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 85.1 ms