Protein–RNA interactions for Protein: P28078

H2-DMa, Class II histocompatibility antigen, M alpha chain, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2-DMaP28078 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
H2-DMaP28078 Gm23170-201ENSMUST00000157158 106 ntBASIC1.2□□□□□ -2.22
H2-DMaP28078 Snord50b-201ENSMUST00000178497 72 ntBASIC1.2□□□□□ -2.22
H2-DMaP28078 Gm27493-201ENSMUST00000184128 78 ntBASIC1.2□□□□□ -2.22
H2-DMaP28078 Gm29603-201ENSMUST00000186792 334 ntBASIC1.2□□□□□ -2.22
H2-DMaP28078 Gm28537-201ENSMUST00000189026 315 ntBASIC1.2□□□□□ -2.22
H2-DMaP28078 Gm29631-201ENSMUST00000191065 315 ntBASIC1.2□□□□□ -2.22
H2-DMaP28078 AC126672.1-201ENSMUST00000217096 396 ntBASIC1.2□□□□□ -2.22
H2-DMaP28078 AC154552.1-201ENSMUST00000222969 202 ntBASIC1.2□□□□□ -2.22
H2-DMaP28078 CT485608.2-201ENSMUST00000227210 291 ntBASIC1.2□□□□□ -2.22
H2-DMaP28078 Gm24042-201ENSMUST00000083114 103 ntBASIC1.2□□□□□ -2.22
H2-DMaP28078 Mir155-201ENSMUST00000083463 65 ntBASIC1.2□□□□□ -2.22
H2-DMaP28078 Gm23345-201ENSMUST00000083817 150 ntBASIC1.2□□□□□ -2.22
H2-DMaP28078 AC153964.2-201ENSMUST00000217704 2474 ntBASIC1.2□□□□□ -2.22
H2-DMaP28078 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
H2-DMaP28078 Gm23492-201ENSMUST00000116837 115 ntBASIC1.19□□□□□ -2.22
H2-DMaP28078 Mup-ps22-201ENSMUST00000121611 243 ntBASIC1.19□□□□□ -2.22
H2-DMaP28078 Gm23214-201ENSMUST00000122716 157 ntBASIC1.19□□□□□ -2.22
H2-DMaP28078 Gm22279-201ENSMUST00000157200 93 ntBASIC1.19□□□□□ -2.22
H2-DMaP28078 Gm27723-201ENSMUST00000157398 63 ntBASIC1.19□□□□□ -2.22
H2-DMaP28078 Gm25423-201ENSMUST00000157609 107 ntBASIC1.19□□□□□ -2.22
H2-DMaP28078 Snord13-201ENSMUST00000157627 104 ntBASIC1.19□□□□□ -2.22
H2-DMaP28078 Gm2962-201ENSMUST00000159266 336 ntBASIC1.19□□□□□ -2.22
H2-DMaP28078 Gm28330-201ENSMUST00000190353 171 ntBASIC1.19□□□□□ -2.22
H2-DMaP28078 Gm37089-201ENSMUST00000195616 129 ntBASIC1.19□□□□□ -2.22
H2-DMaP28078 Gm42594-201ENSMUST00000199511 246 ntBASIC1.19□□□□□ -2.22
H2-DMaP28078 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC1.19□□□□□ -2.22
H2-DMaP28078 AC133934.2-201ENSMUST00000221729 4129 ntBASIC1.18□□□□□ -2.22
H2-DMaP28078 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
H2-DMaP28078 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
H2-DMaP28078 Gm14882-201ENSMUST00000117216 218 ntBASIC1.18□□□□□ -2.22
H2-DMaP28078 Gm10722-201ENSMUST00000151376 651 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
H2-DMaP28078 Gm24847-201ENSMUST00000158032 108 ntBASIC1.18□□□□□ -2.22
H2-DMaP28078 Gm25831-201ENSMUST00000158924 163 ntBASIC1.18□□□□□ -2.22
H2-DMaP28078 Gm21064-202ENSMUST00000190583 278 ntBASIC1.18□□□□□ -2.22
H2-DMaP28078 Gm43427-201ENSMUST00000198188 331 ntBASIC1.18□□□□□ -2.22
H2-DMaP28078 Gm16976-205ENSMUST00000227324 226 ntBASIC1.18□□□□□ -2.22
H2-DMaP28078 Gm25204-201ENSMUST00000082843 106 ntBASIC1.18□□□□□ -2.22
H2-DMaP28078 Gm24038-201ENSMUST00000082872 159 ntBASIC1.18□□□□□ -2.22
H2-DMaP28078 Mir181a-2-201ENSMUST00000083489 76 ntBASIC1.18□□□□□ -2.22
H2-DMaP28078 Gm23039-201ENSMUST00000083870 161 ntBASIC1.18□□□□□ -2.22
H2-DMaP28078 Gm10509-201ENSMUST00000097384 259 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
H2-DMaP28078 Olfr1225-203ENSMUST00000217054 5517 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
H2-DMaP28078 8030445P17Rik-201ENSMUST00000192614 2741 ntBASIC1.18□□□□□ -2.22
H2-DMaP28078 Gm44240-201ENSMUST00000204015 2654 ntBASIC1.17□□□□□ -2.22
H2-DMaP28078 Gm23836-201ENSMUST00000104434 129 ntBASIC1.17□□□□□ -2.22
H2-DMaP28078 Gm14922-201ENSMUST00000121131 163 ntBASIC1.17□□□□□ -2.22
H2-DMaP28078 Gm23122-201ENSMUST00000157645 103 ntBASIC1.17□□□□□ -2.22
H2-DMaP28078 Gm25884-201ENSMUST00000157782 62 ntBASIC1.17□□□□□ -2.22
H2-DMaP28078 Gm23640-201ENSMUST00000157860 104 ntBASIC1.17□□□□□ -2.22
H2-DMaP28078 Gm26022-201ENSMUST00000158663 108 ntBASIC1.17□□□□□ -2.22
H2-DMaP28078 Gm23182-201ENSMUST00000158688 135 ntBASIC1.17□□□□□ -2.22
H2-DMaP28078 Gm19777-201ENSMUST00000191940 358 ntBASIC1.17□□□□□ -2.22
H2-DMaP28078 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC1.17□□□□□ -2.22
H2-DMaP28078 Gm44352-201ENSMUST00000196358 110 ntBASIC1.17□□□□□ -2.22
H2-DMaP28078 Olfr515-ps1-201ENSMUST00000208389 189 ntBASIC1.17□□□□□ -2.22
H2-DMaP28078 AC098718.1-201ENSMUST00000226166 175 ntBASIC1.17□□□□□ -2.22
H2-DMaP28078 Snord14a-201ENSMUST00000082807 87 ntBASIC1.17□□□□□ -2.22
H2-DMaP28078 Gm26495-201ENSMUST00000083152 137 ntBASIC1.17□□□□□ -2.22
H2-DMaP28078 Gm25541-201ENSMUST00000116888 126 ntBASIC1.16□□□□□ -2.22
H2-DMaP28078 Gm14491-201ENSMUST00000121919 199 ntBASIC1.16□□□□□ -2.22
H2-DMaP28078 Gm15213-201ENSMUST00000122098 216 ntBASIC1.16□□□□□ -2.22
H2-DMaP28078 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC1.16□□□□□ -2.22
H2-DMaP28078 Gm23670-201ENSMUST00000157469 119 ntBASIC1.16□□□□□ -2.22
H2-DMaP28078 Gm28849-201ENSMUST00000188127 174 ntBASIC1.16□□□□□ -2.22
H2-DMaP28078 Gm45116-201ENSMUST00000207392 275 ntBASIC1.16□□□□□ -2.22
H2-DMaP28078 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
H2-DMaP28078 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC1.16□□□□□ -2.22
H2-DMaP28078 Gm25068-201ENSMUST00000103895 110 ntBASIC1.15□□□□□ -2.23
H2-DMaP28078 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC1.15□□□□□ -2.23
H2-DMaP28078 Gm14919-201ENSMUST00000120839 390 ntBASIC1.15□□□□□ -2.23
H2-DMaP28078 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC1.15□□□□□ -2.23
H2-DMaP28078 Gm23982-201ENSMUST00000157141 106 ntBASIC1.15□□□□□ -2.23
H2-DMaP28078 Mir1951-201ENSMUST00000157981 89 ntBASIC1.15□□□□□ -2.23
H2-DMaP28078 Mir7675-201ENSMUST00000184262 58 ntBASIC1.15□□□□□ -2.23
H2-DMaP28078 Gm28409-201ENSMUST00000187064 103 ntBASIC1.15□□□□□ -2.23
H2-DMaP28078 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.15□□□□□ -2.23
H2-DMaP28078 Gm26447-201ENSMUST00000082448 129 ntBASIC1.15□□□□□ -2.23
H2-DMaP28078 Gm22248-201ENSMUST00000082482 150 ntBASIC1.15□□□□□ -2.23
H2-DMaP28078 Mir92-2-201ENSMUST00000083679 91 ntBASIC1.15□□□□□ -2.23
H2-DMaP28078 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC1.15□□□□□ -2.23
H2-DMaP28078 Gm44177-201ENSMUST00000204338 2667 ntBASIC1.14□□□□□ -2.23
H2-DMaP28078 Mir301b-201ENSMUST00000102333 97 ntBASIC1.14□□□□□ -2.23
H2-DMaP28078 Mir669i-201ENSMUST00000117007 127 ntBASIC1.14□□□□□ -2.23
H2-DMaP28078 Gm12309-201ENSMUST00000119889 182 ntBASIC1.14□□□□□ -2.23
H2-DMaP28078 Gm22984-201ENSMUST00000122751 122 ntBASIC1.14□□□□□ -2.23
H2-DMaP28078 Gm42719-201ENSMUST00000197393 355 ntBASIC1.14□□□□□ -2.23
H2-DMaP28078 Gm42774-201ENSMUST00000198854 283 ntBASIC1.14□□□□□ -2.23
H2-DMaP28078 Gm43406-201ENSMUST00000200356 334 ntBASIC1.14□□□□□ -2.23
H2-DMaP28078 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC1.14□□□□□ -2.23
H2-DMaP28078 AC098718.2-201ENSMUST00000226822 285 ntBASIC1.14□□□□□ -2.23
H2-DMaP28078 Gm24764-201ENSMUST00000083686 199 ntBASIC1.14□□□□□ -2.23
H2-DMaP28078 Gm24261-201ENSMUST00000083744 104 ntBASIC1.14□□□□□ -2.23
H2-DMaP28078 Gm14917-201ENSMUST00000118872 2105 ntBASIC1.13□□□□□ -2.23
H2-DMaP28078 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
H2-DMaP28078 Olfr183-201ENSMUST00000073320 2040 ntAPPRIS P1 TSL 2 BASIC1.13□□□□□ -2.23
H2-DMaP28078 Mir544-201ENSMUST00000103813 78 ntBASIC1.13□□□□□ -2.23
H2-DMaP28078 Gm26479-201ENSMUST00000122620 106 ntBASIC1.13□□□□□ -2.23
H2-DMaP28078 n-R5s188-201ENSMUST00000122646 105 ntBASIC1.13□□□□□ -2.23
H2-DMaP28078 Gm26049-201ENSMUST00000157313 108 ntBASIC1.13□□□□□ -2.23
Retrieved 100 of 76,532 protein–RNA pairs in 213 ms