Protein–RNA interactions for Protein: P15409

Rho, Rhodopsin, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RhoP15409 Gm25321-201ENSMUST00000122558 102 ntBASIC2.21□□□□□ -2.06
RhoP15409 Gm23230-201ENSMUST00000157298 133 ntBASIC2.21□□□□□ -2.06
RhoP15409 Gm25914-201ENSMUST00000157618 153 ntBASIC2.21□□□□□ -2.06
RhoP15409 Gm23858-201ENSMUST00000158384 106 ntBASIC2.21□□□□□ -2.06
RhoP15409 Mir7017-201ENSMUST00000184894 62 ntBASIC2.21□□□□□ -2.06
RhoP15409 Mir3569-201ENSMUST00000185080 58 ntBASIC2.21□□□□□ -2.06
RhoP15409 Gm33866-201ENSMUST00000196911 289 ntBASIC2.21□□□□□ -2.06
RhoP15409 Mir7215-201ENSMUST00000200383 51 ntBASIC2.21□□□□□ -2.06
RhoP15409 Gm36189-201ENSMUST00000204113 523 ntBASIC2.21□□□□□ -2.06
RhoP15409 Gm24977-201ENSMUST00000083106 163 ntBASIC2.21□□□□□ -2.06
RhoP15409 Gm25124-201ENSMUST00000083345 164 ntBASIC2.21□□□□□ -2.06
RhoP15409 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC2.21□□□□□ -2.06
RhoP15409 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
RhoP15409 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
RhoP15409 Gm37063-201ENSMUST00000194678 3520 ntBASIC2.2□□□□□ -2.06
RhoP15409 Gm25538-201ENSMUST00000101943 107 ntBASIC2.2□□□□□ -2.06
RhoP15409 n-R5s158-201ENSMUST00000104095 118 ntBASIC2.2□□□□□ -2.06
RhoP15409 Gm6444-201ENSMUST00000119611 458 ntBASIC2.2□□□□□ -2.06
RhoP15409 n-R5s159-201ENSMUST00000122681 120 ntBASIC2.2□□□□□ -2.06
RhoP15409 Gm24237-201ENSMUST00000157790 132 ntBASIC2.2□□□□□ -2.06
RhoP15409 Mir1951-201ENSMUST00000157981 89 ntBASIC2.2□□□□□ -2.06
RhoP15409 Gm25051-201ENSMUST00000158602 249 ntBASIC2.2□□□□□ -2.06
RhoP15409 Gm24177-201ENSMUST00000158927 131 ntBASIC2.2□□□□□ -2.06
RhoP15409 Gm44564-201ENSMUST00000207985 180 ntBASIC2.2□□□□□ -2.06
RhoP15409 Gm25634-201ENSMUST00000082667 105 ntBASIC2.2□□□□□ -2.06
RhoP15409 Gm22972-201ENSMUST00000083297 131 ntBASIC2.2□□□□□ -2.06
RhoP15409 AC157570.1-201ENSMUST00000218052 3778 ntBASIC2.2□□□□□ -2.06
RhoP15409 Gm43373-201ENSMUST00000202552 2870 ntBASIC2.2□□□□□ -2.06
RhoP15409 Olfr576-201ENSMUST00000098213 3132 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
RhoP15409 Gm24598-201ENSMUST00000122510 74 ntBASIC2.19□□□□□ -2.06
RhoP15409 Gm23101-201ENSMUST00000157550 137 ntBASIC2.19□□□□□ -2.06
RhoP15409 Gm25494-201ENSMUST00000158143 100 ntBASIC2.19□□□□□ -2.06
RhoP15409 Gm22075-201ENSMUST00000158599 192 ntBASIC2.19□□□□□ -2.06
RhoP15409 Gm24277-201ENSMUST00000158661 104 ntBASIC2.19□□□□□ -2.06
RhoP15409 Gm22093-201ENSMUST00000158980 111 ntBASIC2.19□□□□□ -2.06
RhoP15409 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
RhoP15409 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC2.19□□□□□ -2.06
RhoP15409 Gm27991-201ENSMUST00000184804 137 ntBASIC2.19□□□□□ -2.06
RhoP15409 Gm45116-201ENSMUST00000207392 275 ntBASIC2.19□□□□□ -2.06
RhoP15409 Gm46993-201ENSMUST00000220708 259 ntBASIC2.19□□□□□ -2.06
RhoP15409 Gm6109-201ENSMUST00000223297 348 ntBASIC2.19□□□□□ -2.06
RhoP15409 Mir423-201ENSMUST00000083584 109 ntBASIC2.19□□□□□ -2.06
RhoP15409 AC153964.2-201ENSMUST00000217704 2474 ntBASIC2.19□□□□□ -2.06
RhoP15409 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
RhoP15409 Gm2869-201ENSMUST00000124359 2621 ntBASIC2.19□□□□□ -2.06
RhoP15409 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
RhoP15409 Gm43753-201ENSMUST00000196539 3309 ntBASIC2.18□□□□□ -2.06
RhoP15409 Gm25961-201ENSMUST00000157174 135 ntBASIC2.18□□□□□ -2.06
RhoP15409 Gm24769-201ENSMUST00000158506 129 ntBASIC2.18□□□□□ -2.06
RhoP15409 Gm24390-201ENSMUST00000179578 62 ntBASIC2.18□□□□□ -2.06
RhoP15409 Gm28344-201ENSMUST00000185704 279 ntBASIC2.18□□□□□ -2.06
RhoP15409 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC2.18□□□□□ -2.06
RhoP15409 AC125167.1-201ENSMUST00000198698 141 ntBASIC2.18□□□□□ -2.06
RhoP15409 Gm18188-201ENSMUST00000219386 478 ntBASIC2.18□□□□□ -2.06
RhoP15409 AC127578.1-201ENSMUST00000227289 93 ntBASIC2.18□□□□□ -2.06
RhoP15409 n-R5s197-201ENSMUST00000083302 119 ntBASIC2.18□□□□□ -2.06
RhoP15409 Gm22866-201ENSMUST00000083947 177 ntBASIC2.18□□□□□ -2.06
RhoP15409 AL645643.1-201ENSMUST00000222438 3897 ntBASIC2.18□□□□□ -2.06
RhoP15409 Gm44680-201ENSMUST00000208414 2910 ntBASIC2.17□□□□□ -2.06
RhoP15409 Gm24098-201ENSMUST00000102075 109 ntBASIC2.17□□□□□ -2.06
RhoP15409 Gm25381-201ENSMUST00000102078 109 ntBASIC2.17□□□□□ -2.06
RhoP15409 Gm23015-201ENSMUST00000104145 128 ntBASIC2.17□□□□□ -2.06
RhoP15409 Gm13913-201ENSMUST00000121126 260 ntBASIC2.17□□□□□ -2.06
RhoP15409 Gm14491-201ENSMUST00000121919 199 ntBASIC2.17□□□□□ -2.06
RhoP15409 n-R5s191-201ENSMUST00000122724 116 ntBASIC2.17□□□□□ -2.06
RhoP15409 Gm22221-201ENSMUST00000157362 103 ntBASIC2.17□□□□□ -2.06
RhoP15409 Gm23670-201ENSMUST00000157469 119 ntBASIC2.17□□□□□ -2.06
RhoP15409 Gm24015-201ENSMUST00000157725 232 ntBASIC2.17□□□□□ -2.06
RhoP15409 Gm20438-201ENSMUST00000174441 329 ntBASIC2.17□□□□□ -2.06
RhoP15409 Gm27928-201ENSMUST00000183747 256 ntBASIC2.17□□□□□ -2.06
RhoP15409 Gm27285-201ENSMUST00000183875 127 ntBASIC2.17□□□□□ -2.06
RhoP15409 Gm24661-201ENSMUST00000083205 104 ntBASIC2.17□□□□□ -2.06
RhoP15409 Mir302d-201ENSMUST00000083513 66 ntBASIC2.17□□□□□ -2.06
RhoP15409 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC2.17□□□□□ -2.06
RhoP15409 Gm42862-201ENSMUST00000197494 2621 ntBASIC2.17□□□□□ -2.06
RhoP15409 Gm18795-201ENSMUST00000222371 3266 ntTSL 5 BASIC2.16□□□□□ -2.06
RhoP15409 Gm22935-201ENSMUST00000103960 104 ntBASIC2.16□□□□□ -2.06
RhoP15409 Gm26280-201ENSMUST00000157096 101 ntBASIC2.16□□□□□ -2.06
RhoP15409 Gm24900-201ENSMUST00000158128 134 ntBASIC2.16□□□□□ -2.06
RhoP15409 Gm25711-201ENSMUST00000158633 128 ntBASIC2.16□□□□□ -2.06
RhoP15409 Mir6376-201ENSMUST00000185149 131 ntBASIC2.16□□□□□ -2.06
RhoP15409 Gm45489-201ENSMUST00000211753 443 ntTSL 3 BASIC2.16□□□□□ -2.06
RhoP15409 Olfr868-201ENSMUST00000212767 4196 ntAPPRIS P1 TSL 3 BASIC2.16□□□□□ -2.06
RhoP15409 Ppp1r3a-201ENSMUST00000045096 6965 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
RhoP15409 Gm14748-201ENSMUST00000119819 411 ntBASIC2.15□□□□□ -2.07
RhoP15409 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC2.15□□□□□ -2.07
RhoP15409 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC2.15□□□□□ -2.07
RhoP15409 Gm27443-201ENSMUST00000184660 98 ntBASIC2.15□□□□□ -2.07
RhoP15409 Gm6105-201ENSMUST00000200580 624 ntBASIC2.15□□□□□ -2.07
RhoP15409 AC122465.2-201ENSMUST00000221774 354 ntBASIC2.15□□□□□ -2.07
RhoP15409 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
RhoP15409 Gm10959-201ENSMUST00000106431 72 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
RhoP15409 Gm13801-201ENSMUST00000120750 160 ntBASIC2.14□□□□□ -2.07
RhoP15409 Gm15214-201ENSMUST00000122155 470 ntBASIC2.14□□□□□ -2.07
RhoP15409 Gm25996-201ENSMUST00000175393 117 ntBASIC2.14□□□□□ -2.07
RhoP15409 Mir669k-201ENSMUST00000177742 127 ntBASIC2.14□□□□□ -2.07
RhoP15409 Gm25673-201ENSMUST00000179957 127 ntBASIC2.14□□□□□ -2.07
RhoP15409 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC2.14□□□□□ -2.07
RhoP15409 Gm24313-201ENSMUST00000082561 133 ntBASIC2.14□□□□□ -2.07
RhoP15409 Gm24615-201ENSMUST00000083268 113 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 100.5 ms