Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 Uty-208ENSMUST00000154004 4267 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
Msx1P13297 Gm25407-201ENSMUST00000104102 134 ntBASIC3.39□□□□□ -1.87
Msx1P13297 Mir26a-1-201ENSMUST00000083579 90 ntBASIC3.39□□□□□ -1.87
Msx1P13297 Snord15a-201ENSMUST00000083888 148 ntBASIC3.39□□□□□ -1.87
Msx1P13297 Fsip2-203ENSMUST00000143764 21116 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Msx1P13297 Olfr1211-204ENSMUST00000215205 4220 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Msx1P13297 AC126033.1-201ENSMUST00000227628 6773 ntBASIC3.39□□□□□ -1.87
Msx1P13297 Nlrp9a-204ENSMUST00000122040 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
Msx1P13297 Zfp945-205ENSMUST00000160457 6497 ntAPPRIS P4 TSL 1 (best) BASIC3.38□□□□□ -1.87
Msx1P13297 Olfr1253-202ENSMUST00000213484 4812 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Msx1P13297 Vmn2r-ps46-201ENSMUST00000172969 2556 ntBASIC3.38□□□□□ -1.87
Msx1P13297 n-R5s191-201ENSMUST00000122724 116 ntBASIC3.38□□□□□ -1.87
Msx1P13297 Gm22319-201ENSMUST00000157147 122 ntBASIC3.38□□□□□ -1.87
Msx1P13297 Gm25558-201ENSMUST00000158083 106 ntBASIC3.38□□□□□ -1.87
Msx1P13297 Gm23223-201ENSMUST00000158119 127 ntBASIC3.38□□□□□ -1.87
Msx1P13297 Gm25860-201ENSMUST00000158252 126 ntBASIC3.38□□□□□ -1.87
Msx1P13297 Gm25488-201ENSMUST00000158728 118 ntBASIC3.38□□□□□ -1.87
Msx1P13297 Mir6377-201ENSMUST00000183760 114 ntBASIC3.38□□□□□ -1.87
Msx1P13297 Mir7k-201ENSMUST00000184115 110 ntBASIC3.38□□□□□ -1.87
Msx1P13297 Mir6928-201ENSMUST00000185166 70 ntBASIC3.38□□□□□ -1.87
Msx1P13297 Gm37698-201ENSMUST00000192605 463 ntBASIC3.38□□□□□ -1.87
Msx1P13297 AC122327.1-201ENSMUST00000220778 108 ntBASIC3.38□□□□□ -1.87
Msx1P13297 Olfr1402-202ENSMUST00000199297 4051 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Msx1P13297 Rab27b-203ENSMUST00000121693 6891 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Msx1P13297 Olfr679-202ENSMUST00000214328 5184 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Msx1P13297 Gm45159-201ENSMUST00000208630 25241 ntTSL 5 BASIC3.37□□□□□ -1.87
Msx1P13297 Rictor-201ENSMUST00000061656 9312 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Msx1P13297 Vmn1r71-208ENSMUST00000228374 3717 ntAPPRIS P2 BASIC3.37□□□□□ -1.87
Msx1P13297 Gm45264-201ENSMUST00000210090 3995 ntBASIC3.37□□□□□ -1.87
Msx1P13297 Olfr65-201ENSMUST00000106864 2648 ntAPPRIS ALT1 TSL 5 BASIC3.37□□□□□ -1.87
Msx1P13297 Olfr112-201ENSMUST00000085548 3103 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Msx1P13297 Gm22545-201ENSMUST00000104350 132 ntBASIC3.37□□□□□ -1.87
Msx1P13297 Gm23257-201ENSMUST00000158322 132 ntBASIC3.37□□□□□ -1.87
Msx1P13297 Gm25519-201ENSMUST00000158392 127 ntBASIC3.37□□□□□ -1.87
Msx1P13297 Gm27903-201ENSMUST00000175482 126 ntBASIC3.37□□□□□ -1.87
Msx1P13297 Snord92-201ENSMUST00000175548 85 ntBASIC3.37□□□□□ -1.87
Msx1P13297 Gm29602-201ENSMUST00000186887 442 ntBASIC3.37□□□□□ -1.87
Msx1P13297 Gm13266-203ENSMUST00000193364 421 ntTSL 3 BASIC3.37□□□□□ -1.87
Msx1P13297 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC3.37□□□□□ -1.87
Msx1P13297 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Msx1P13297 Cntn6-202ENSMUST00000161070 3515 ntTSL 5 BASIC3.37□□□□□ -1.87
Msx1P13297 Olfr652-203ENSMUST00000216131 4773 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Msx1P13297 A230081H15Rik-201ENSMUST00000218326 2929 ntBASIC3.37□□□□□ -1.87
Msx1P13297 Macf1-206ENSMUST00000106224 23402 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
Msx1P13297 Olfr389-203ENSMUST00000215418 3417 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Msx1P13297 Gm25610-201ENSMUST00000104016 129 ntBASIC3.36□□□□□ -1.87
Msx1P13297 Gm24126-201ENSMUST00000104111 106 ntBASIC3.36□□□□□ -1.87
Msx1P13297 Gm23530-201ENSMUST00000104564 137 ntBASIC3.36□□□□□ -1.87
Msx1P13297 Gm11792-201ENSMUST00000120640 168 ntBASIC3.36□□□□□ -1.87
Msx1P13297 Gm24632-201ENSMUST00000122770 323 ntBASIC3.36□□□□□ -1.87
Msx1P13297 Gm20399-201ENSMUST00000174652 132 ntBASIC3.36□□□□□ -1.87
Msx1P13297 Gm44476-201ENSMUST00000196225 91 ntBASIC3.36□□□□□ -1.87
Msx1P13297 Gm44491-201ENSMUST00000196794 96 ntBASIC3.36□□□□□ -1.87
Msx1P13297 Gm35736-201ENSMUST00000203681 313 ntBASIC3.36□□□□□ -1.87
Msx1P13297 Olfr1314-202ENSMUST00000207976 2976 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Msx1P13297 Gm31450-201ENSMUST00000220668 132 ntTSL 2 BASIC3.36□□□□□ -1.87
Msx1P13297 Snora41-201ENSMUST00000082668 132 ntBASIC3.36□□□□□ -1.87
Msx1P13297 Gm22304-201ENSMUST00000082688 129 ntBASIC3.36□□□□□ -1.87
Msx1P13297 Gm22154-201ENSMUST00000083844 131 ntBASIC3.36□□□□□ -1.87
Msx1P13297 Zbtb41-201ENSMUST00000039867 8361 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Msx1P13297 Tug1-201ENSMUST00000132077 6719 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Msx1P13297 Gm42445-201ENSMUST00000196996 2893 ntBASIC3.35□□□□□ -1.87
Msx1P13297 Olfr1229-203ENSMUST00000214593 3404 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Msx1P13297 Gm11356-201ENSMUST00000118974 192 ntBASIC3.35□□□□□ -1.87
Msx1P13297 Gm27592-201ENSMUST00000157729 126 ntBASIC3.35□□□□□ -1.87
Msx1P13297 Gm22174-201ENSMUST00000175050 125 ntBASIC3.35□□□□□ -1.87
Msx1P13297 Gm22692-201ENSMUST00000175055 125 ntBASIC3.35□□□□□ -1.87
Msx1P13297 Gm27634-201ENSMUST00000175060 126 ntBASIC3.35□□□□□ -1.87
Msx1P13297 Gm22460-201ENSMUST00000175269 124 ntBASIC3.35□□□□□ -1.87
Msx1P13297 Gm24365-201ENSMUST00000175384 125 ntBASIC3.35□□□□□ -1.87
Msx1P13297 Gm44310-201ENSMUST00000175424 126 ntBASIC3.35□□□□□ -1.87
Msx1P13297 Gm22639-201ENSMUST00000175591 125 ntBASIC3.35□□□□□ -1.87
Msx1P13297 Gm24979-201ENSMUST00000178626 126 ntBASIC3.35□□□□□ -1.87
Msx1P13297 Gm27582-201ENSMUST00000184084 126 ntBASIC3.35□□□□□ -1.87
Msx1P13297 Mir6715-201ENSMUST00000184990 57 ntBASIC3.35□□□□□ -1.87
Msx1P13297 Gm27743-201ENSMUST00000185136 126 ntBASIC3.35□□□□□ -1.87
Msx1P13297 Gm28155-201ENSMUST00000191066 151 ntBASIC3.35□□□□□ -1.87
Msx1P13297 Olfr364-ps1-203ENSMUST00000217298 2894 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Msx1P13297 Syne2-210ENSMUST00000143031 21704 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
Msx1P13297 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
Msx1P13297 Pik3ca-201ENSMUST00000029201 8917 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Msx1P13297 Gm24119-201ENSMUST00000103979 246 ntBASIC3.34□□□□□ -1.87
Msx1P13297 Gm14671-201ENSMUST00000121790 262 ntBASIC3.34□□□□□ -1.87
Msx1P13297 Gm11192-201ENSMUST00000127017 151 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Msx1P13297 Gm26088-201ENSMUST00000157896 131 ntBASIC3.34□□□□□ -1.87
Msx1P13297 Gm22387-201ENSMUST00000158191 131 ntBASIC3.34□□□□□ -1.87
Msx1P13297 AC124549.2-201ENSMUST00000224243 222 ntBASIC3.34□□□□□ -1.87
Msx1P13297 Vmn1r219-204ENSMUST00000228113 5639 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Msx1P13297 Cp-204ENSMUST00000108328 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
Msx1P13297 Olfr1325-203ENSMUST00000216108 3535 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
Msx1P13297 Gm14937-201ENSMUST00000119709 208 ntBASIC3.33□□□□□ -1.88
Msx1P13297 Uqcrh-ps2-201ENSMUST00000121613 269 ntBASIC3.33□□□□□ -1.88
Msx1P13297 Gm26345-201ENSMUST00000157534 120 ntBASIC3.33□□□□□ -1.88
Msx1P13297 Gm22963-201ENSMUST00000157960 91 ntBASIC3.33□□□□□ -1.88
Msx1P13297 Gm23384-201ENSMUST00000158593 103 ntBASIC3.33□□□□□ -1.88
Msx1P13297 Gm25490-201ENSMUST00000158734 130 ntBASIC3.33□□□□□ -1.88
Msx1P13297 Gm22853-201ENSMUST00000174974 131 ntBASIC3.33□□□□□ -1.88
Msx1P13297 Gm45288-201ENSMUST00000210236 151 ntBASIC3.33□□□□□ -1.88
Msx1P13297 Gm18346-201ENSMUST00000216782 325 ntBASIC3.33□□□□□ -1.88
Msx1P13297 AC167669.1-201ENSMUST00000224932 384 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 81.9 ms