Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Gm24510-201ENSMUST00000174965 94 ntBASIC3.21□□□□□ -1.9
RaraP11416 Mir5123-201ENSMUST00000177794 83 ntBASIC3.21□□□□□ -1.9
RaraP11416 Mir6350-201ENSMUST00000183639 105 ntBASIC3.21□□□□□ -1.9
RaraP11416 Gm27672-201ENSMUST00000183751 204 ntBASIC3.21□□□□□ -1.9
RaraP11416 Mir7k-201ENSMUST00000184115 110 ntBASIC3.21□□□□□ -1.9
RaraP11416 Snhg14-203ENSMUST00000185815 670 ntTSL 5 BASIC3.21□□□□□ -1.9
RaraP11416 Gm37007-201ENSMUST00000194234 319 ntBASIC3.21□□□□□ -1.9
RaraP11416 Gm43475-201ENSMUST00000196673 400 ntTSL 2 BASIC3.21□□□□□ -1.9
RaraP11416 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC3.21□□□□□ -1.9
RaraP11416 Gm44666-201ENSMUST00000208544 391 ntBASIC3.21□□□□□ -1.9
RaraP11416 Gm45288-201ENSMUST00000210236 151 ntBASIC3.21□□□□□ -1.9
RaraP11416 Gm43706-201ENSMUST00000198767 2652 ntBASIC3.21□□□□□ -1.9
RaraP11416 AC104897.1-201ENSMUST00000222638 3628 ntBASIC3.21□□□□□ -1.9
RaraP11416 Olfr1450-202ENSMUST00000213587 2872 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
RaraP11416 Olfr1042-201ENSMUST00000099908 4119 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
RaraP11416 Vmn1r80-205ENSMUST00000227755 10455 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
RaraP11416 Gpr174-201ENSMUST00000101294 4614 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
RaraP11416 Gm22004-201ENSMUST00000101884 107 ntBASIC3.2□□□□□ -1.9
RaraP11416 Gm22490-201ENSMUST00000157188 119 ntBASIC3.2□□□□□ -1.9
RaraP11416 Gm24813-201ENSMUST00000175310 84 ntBASIC3.2□□□□□ -1.9
RaraP11416 Gm26297-201ENSMUST00000179464 132 ntBASIC3.2□□□□□ -1.9
RaraP11416 AL603834.1-201ENSMUST00000198372 121 ntBASIC3.2□□□□□ -1.9
RaraP11416 Gm45456-201ENSMUST00000210841 243 ntBASIC3.2□□□□□ -1.9
RaraP11416 Gm44177-201ENSMUST00000204338 2667 ntBASIC3.2□□□□□ -1.9
RaraP11416 Olfr65-203ENSMUST00000214300 2855 ntAPPRIS ALT1 TSL 5 BASIC3.2□□□□□ -1.9
RaraP11416 Gm43879-201ENSMUST00000203811 3760 ntBASIC3.2□□□□□ -1.9
RaraP11416 Olfr1256-203ENSMUST00000213833 6081 ntAPPRIS P1 TSL 3 BASIC3.19□□□□□ -1.9
RaraP11416 Vmn1r219-204ENSMUST00000228113 5639 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
RaraP11416 Gm38083-201ENSMUST00000194758 3498 ntBASIC3.19□□□□□ -1.9
RaraP11416 Olfr1161-202ENSMUST00000214438 3675 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
RaraP11416 Uty-208ENSMUST00000154004 4267 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
RaraP11416 Gm42684-201ENSMUST00000197663 3615 ntBASIC3.19□□□□□ -1.9
RaraP11416 Gm14502-201ENSMUST00000118154 113 ntBASIC3.19□□□□□ -1.9
RaraP11416 Gm26277-201ENSMUST00000157097 152 ntBASIC3.19□□□□□ -1.9
RaraP11416 Gm22790-201ENSMUST00000157229 129 ntBASIC3.19□□□□□ -1.9
RaraP11416 Gm22187-201ENSMUST00000157819 129 ntBASIC3.19□□□□□ -1.9
RaraP11416 Gm24837-201ENSMUST00000158683 81 ntBASIC3.19□□□□□ -1.9
RaraP11416 Gm15629-201ENSMUST00000161819 476 ntTSL 5 BASIC3.19□□□□□ -1.9
RaraP11416 Gm16111-201ENSMUST00000162128 285 ntBASIC3.19□□□□□ -1.9
RaraP11416 Gm27792-201ENSMUST00000184031 115 ntBASIC3.19□□□□□ -1.9
RaraP11416 Gm9765-201ENSMUST00000043170 321 ntBASIC3.19□□□□□ -1.9
RaraP11416 Mir155-201ENSMUST00000083463 65 ntBASIC3.19□□□□□ -1.9
RaraP11416 Gm23847-201ENSMUST00000083829 110 ntBASIC3.19□□□□□ -1.9
RaraP11416 Olfr881-202ENSMUST00000212489 4237 ntAPPRIS P1 TSL 3 BASIC3.19□□□□□ -1.9
RaraP11416 Gm15697-201ENSMUST00000121946 2902 ntBASIC3.19□□□□□ -1.9
RaraP11416 Gm26696-201ENSMUST00000181941 2848 ntBASIC3.19□□□□□ -1.9
RaraP11416 Zfp40-206ENSMUST00000172177 2736 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
RaraP11416 Olfr592-203ENSMUST00000218618 5978 ntTSL 5 BASIC3.19□□□□□ -1.9
RaraP11416 Tlr3-205ENSMUST00000209772 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
RaraP11416 Tug1-201ENSMUST00000132077 6719 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
RaraP11416 Olfr235-205ENSMUST00000214638 3459 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
RaraP11416 Mir673-201ENSMUST00000102361 91 ntBASIC3.18□□□□□ -1.9
RaraP11416 Gm22658-201ENSMUST00000104196 155 ntBASIC3.18□□□□□ -1.9
RaraP11416 Gm24598-201ENSMUST00000122510 74 ntBASIC3.18□□□□□ -1.9
RaraP11416 Gm22956-201ENSMUST00000122520 80 ntBASIC3.18□□□□□ -1.9
RaraP11416 4930527E20Rik-201ENSMUST00000135700 351 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
RaraP11416 Gm23716-201ENSMUST00000157348 144 ntBASIC3.18□□□□□ -1.9
RaraP11416 Gm23588-201ENSMUST00000157659 99 ntBASIC3.18□□□□□ -1.9
RaraP11416 Gm24877-201ENSMUST00000158779 116 ntBASIC3.18□□□□□ -1.9
RaraP11416 Mir3470b-201ENSMUST00000175563 126 ntBASIC3.18□□□□□ -1.9
RaraP11416 Gm43932-201ENSMUST00000204499 52 ntBASIC3.18□□□□□ -1.9
RaraP11416 Gm44057-201ENSMUST00000204547 96 ntBASIC3.18□□□□□ -1.9
RaraP11416 Gm44877-201ENSMUST00000206485 274 ntTSL 5 BASIC3.18□□□□□ -1.9
RaraP11416 Gm22055-201ENSMUST00000083388 107 ntBASIC3.18□□□□□ -1.9
RaraP11416 Olfr347-202ENSMUST00000216882 3385 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
RaraP11416 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
RaraP11416 Olfr1208-202ENSMUST00000214121 2823 ntAPPRIS P1 TSL 3 BASIC3.17□□□□□ -1.9
RaraP11416 Mir291a-201ENSMUST00000104815 82 ntBASIC3.17□□□□□ -1.9
RaraP11416 Gm23791-201ENSMUST00000122553 293 ntBASIC3.17□□□□□ -1.9
RaraP11416 Gm23325-201ENSMUST00000157422 129 ntBASIC3.17□□□□□ -1.9
RaraP11416 Gm43324-201ENSMUST00000197482 289 ntBASIC3.17□□□□□ -1.9
RaraP11416 AC160962.3-201ENSMUST00000225914 112 ntBASIC3.17□□□□□ -1.9
RaraP11416 Olfr652-204ENSMUST00000219111 5329 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
RaraP11416 Olfr1186-202ENSMUST00000215912 1850 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
RaraP11416 Gm14602-201ENSMUST00000118625 340 ntBASIC3.16□□□□□ -1.9
RaraP11416 Gm14389-201ENSMUST00000140453 241 ntBASIC3.16□□□□□ -1.9
RaraP11416 Gm5224-201ENSMUST00000183060 350 ntBASIC3.16□□□□□ -1.9
RaraP11416 Gm27700-201ENSMUST00000185003 81 ntBASIC3.16□□□□□ -1.9
RaraP11416 Gm25124-201ENSMUST00000083345 164 ntBASIC3.16□□□□□ -1.9
RaraP11416 Agmo-201ENSMUST00000049874 2423 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
RaraP11416 Wnk3-201ENSMUST00000096285 8551 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
RaraP11416 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
RaraP11416 Olfr109-203ENSMUST00000214938 5550 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
RaraP11416 Gm22023-201ENSMUST00000104354 130 ntBASIC3.15□□□□□ -1.91
RaraP11416 Gm23907-201ENSMUST00000104595 189 ntBASIC3.15□□□□□ -1.91
RaraP11416 Gm44489-201ENSMUST00000104619 97 ntBASIC3.15□□□□□ -1.91
RaraP11416 Gm16171-201ENSMUST00000118004 324 ntBASIC3.15□□□□□ -1.91
RaraP11416 Gm25491-201ENSMUST00000158733 308 ntBASIC3.15□□□□□ -1.91
RaraP11416 Gm25470-201ENSMUST00000175576 111 ntBASIC3.15□□□□□ -1.91
RaraP11416 Gm23567-201ENSMUST00000178005 107 ntBASIC3.15□□□□□ -1.91
RaraP11416 Mir7009-201ENSMUST00000184519 64 ntBASIC3.15□□□□□ -1.91
RaraP11416 Gm6060-201ENSMUST00000188671 251 ntBASIC3.15□□□□□ -1.91
RaraP11416 Traj57-202ENSMUST00000196977 63 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
RaraP11416 Gm42716-203ENSMUST00000197140 259 ntTSL 3 BASIC3.15□□□□□ -1.91
RaraP11416 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC3.15□□□□□ -1.91
RaraP11416 Vmn1r13-203ENSMUST00000227298 5203 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
RaraP11416 Gm45104-201ENSMUST00000208748 4350 ntBASIC3.14□□□□□ -1.91
RaraP11416 Olfr389-201ENSMUST00000122224 3057 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
RaraP11416 Ctdspl2-202ENSMUST00000110572 4160 ntTSL 5 BASIC3.14□□□□□ -1.91
RaraP11416 Gm24375-201ENSMUST00000104397 132 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 137.3 ms