Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm24401-201ENSMUST00000157868 91 ntBASIC1.08□□□□□ -2.24
Lire1P11260 Mir7063-201ENSMUST00000184158 91 ntBASIC1.08□□□□□ -2.24
Lire1P11260 Gm44358-201ENSMUST00000196301 98 ntBASIC1.08□□□□□ -2.24
Lire1P11260 Gm42891-201ENSMUST00000199340 281 ntTSL 5 BASIC1.08□□□□□ -2.24
Lire1P11260 AC157476.1-201ENSMUST00000215555 169 ntBASIC1.08□□□□□ -2.24
Lire1P11260 Gm18188-201ENSMUST00000219386 478 ntBASIC1.08□□□□□ -2.24
Lire1P11260 AC133083.2-201ENSMUST00000222826 272 ntTSL 5 BASIC1.08□□□□□ -2.24
Lire1P11260 CT009713.9-201ENSMUST00000223604 389 ntBASIC1.08□□□□□ -2.24
Lire1P11260 CU062626.2-201ENSMUST00000223953 274 ntBASIC1.08□□□□□ -2.24
Lire1P11260 Gm25851-201ENSMUST00000082794 107 ntBASIC1.08□□□□□ -2.24
Lire1P11260 Gm22884-201ENSMUST00000083127 140 ntBASIC1.08□□□□□ -2.24
Lire1P11260 Gm25409-201ENSMUST00000083764 131 ntBASIC1.08□□□□□ -2.24
Lire1P11260 Gm43877-201ENSMUST00000205029 2238 ntBASIC1.08□□□□□ -2.24
Lire1P11260 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC1.08□□□□□ -2.24
Lire1P11260 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC1.07□□□□□ -2.24
Lire1P11260 Olfr1154-202ENSMUST00000215017 2917 ntAPPRIS P1 TSL 5 BASIC1.07□□□□□ -2.24
Lire1P11260 Gm22544-201ENSMUST00000104349 127 ntBASIC1.07□□□□□ -2.24
Lire1P11260 Gm44458-201ENSMUST00000196594 143 ntBASIC1.07□□□□□ -2.24
Lire1P11260 Gm44465-201ENSMUST00000199536 114 ntBASIC1.07□□□□□ -2.24
Lire1P11260 Gm23627-201ENSMUST00000082459 107 ntBASIC1.07□□□□□ -2.24
Lire1P11260 Gm22502-201ENSMUST00000082488 107 ntBASIC1.07□□□□□ -2.24
Lire1P11260 Gm22977-201ENSMUST00000082615 107 ntBASIC1.07□□□□□ -2.24
Lire1P11260 Gm24149-201ENSMUST00000082757 107 ntBASIC1.07□□□□□ -2.24
Lire1P11260 Mir344-201ENSMUST00000083634 95 ntBASIC1.07□□□□□ -2.24
Lire1P11260 Gm23142-201ENSMUST00000101848 105 ntBASIC1.06□□□□□ -2.24
Lire1P11260 Gm26240-201ENSMUST00000101893 105 ntBASIC1.06□□□□□ -2.24
Lire1P11260 Gm24271-201ENSMUST00000102327 111 ntBASIC1.06□□□□□ -2.24
Lire1P11260 Mir669p-2-201ENSMUST00000103868 87 ntBASIC1.06□□□□□ -2.24
Lire1P11260 Mir669p-1-201ENSMUST00000103884 87 ntBASIC1.06□□□□□ -2.24
Lire1P11260 Gm22545-201ENSMUST00000104350 132 ntBASIC1.06□□□□□ -2.24
Lire1P11260 Vmn1r-ps116-201ENSMUST00000121544 292 ntBASIC1.06□□□□□ -2.24
Lire1P11260 n-R5s188-201ENSMUST00000122646 105 ntBASIC1.06□□□□□ -2.24
Lire1P11260 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
Lire1P11260 Gm22555-201ENSMUST00000157801 62 ntBASIC1.06□□□□□ -2.24
Lire1P11260 Gm25750-201ENSMUST00000175483 112 ntBASIC1.06□□□□□ -2.24
Lire1P11260 Gm22565-201ENSMUST00000175540 69 ntBASIC1.06□□□□□ -2.24
Lire1P11260 Gm26180-201ENSMUST00000179942 107 ntBASIC1.06□□□□□ -2.24
Lire1P11260 Gm26741-201ENSMUST00000180473 87 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
Lire1P11260 Mir6985-201ENSMUST00000184641 61 ntBASIC1.06□□□□□ -2.24
Lire1P11260 Gm28288-201ENSMUST00000191019 214 ntBASIC1.06□□□□□ -2.24
Lire1P11260 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC1.06□□□□□ -2.24
Lire1P11260 Gm22980-201ENSMUST00000082608 70 ntBASIC1.06□□□□□ -2.24
Lire1P11260 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
Lire1P11260 Gm14782-201ENSMUST00000120151 195 ntBASIC1.05□□□□□ -2.24
Lire1P11260 Gm11334-201ENSMUST00000121969 156 ntBASIC1.05□□□□□ -2.24
Lire1P11260 1700047A11Rik-202ENSMUST00000153552 622 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
Lire1P11260 Gm24942-201ENSMUST00000158328 114 ntBASIC1.05□□□□□ -2.24
Lire1P11260 Gm23022-201ENSMUST00000158768 180 ntBASIC1.05□□□□□ -2.24
Lire1P11260 Gm42506-201ENSMUST00000202009 150 ntBASIC1.05□□□□□ -2.24
Lire1P11260 Gm45543-201ENSMUST00000209327 88 ntBASIC1.05□□□□□ -2.24
Lire1P11260 Gm10264-201ENSMUST00000220589 429 ntBASIC1.05□□□□□ -2.24
Lire1P11260 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
Lire1P11260 Gm12748-201ENSMUST00000120763 504 ntBASIC1.04□□□□□ -2.24
Lire1P11260 Igkv15-102-201ENSMUST00000197885 287 ntBASIC1.04□□□□□ -2.24
Lire1P11260 AC160550.1-201ENSMUST00000228659 181 ntBASIC1.04□□□□□ -2.24
Lire1P11260 Gm23614-201ENSMUST00000082598 107 ntBASIC1.04□□□□□ -2.24
Lire1P11260 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
Lire1P11260 n-R5s67-201ENSMUST00000104336 114 ntBASIC1.03□□□□□ -2.24
Lire1P11260 Gm25044-201ENSMUST00000158603 104 ntBASIC1.03□□□□□ -2.24
Lire1P11260 Gm25715-201ENSMUST00000158627 125 ntBASIC1.03□□□□□ -2.24
Lire1P11260 Gm26914-201ENSMUST00000182262 223 ntBASIC1.03□□□□□ -2.24
Lire1P11260 Gm5023-201ENSMUST00000217442 587 ntBASIC1.03□□□□□ -2.24
Lire1P11260 AC167192.1-201ENSMUST00000225908 139 ntBASIC1.03□□□□□ -2.24
Lire1P11260 AC108945.1-201ENSMUST00000226477 94 ntBASIC1.03□□□□□ -2.24
Lire1P11260 Gm22704-201ENSMUST00000083027 137 ntBASIC1.03□□□□□ -2.24
Lire1P11260 Gm21876-201ENSMUST00000096511 282 ntAPPRIS P1 TSL 5 BASIC1.03□□□□□ -2.24
Lire1P11260 Olfr867-202ENSMUST00000212098 4228 ntTSL 3 BASIC1.02□□□□□ -2.25
Lire1P11260 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC1.02□□□□□ -2.25
Lire1P11260 Gm23921-201ENSMUST00000175258 107 ntBASIC1.02□□□□□ -2.25
Lire1P11260 Gm42855-201ENSMUST00000197388 253 ntBASIC1.02□□□□□ -2.25
Lire1P11260 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC1.02□□□□□ -2.25
Lire1P11260 AC164612.2-202ENSMUST00000216314 253 ntBASIC1.02□□□□□ -2.25
Lire1P11260 AC104832.1-201ENSMUST00000222938 550 ntBASIC1.02□□□□□ -2.25
Lire1P11260 Gm26474-201ENSMUST00000116762 122 ntBASIC1.01□□□□□ -2.25
Lire1P11260 Sprr2c-ps-201ENSMUST00000195581 301 ntBASIC1.01□□□□□ -2.25
Lire1P11260 Olfr1070-ps1-201ENSMUST00000215939 388 ntBASIC1.01□□□□□ -2.25
Lire1P11260 CT025526.1-201ENSMUST00000217327 267 ntBASIC1.01□□□□□ -2.25
Lire1P11260 AC131720.2-201ENSMUST00000220420 431 ntBASIC1.01□□□□□ -2.25
Lire1P11260 DQ267101-201ENSMUST00000082562 73 ntBASIC1.01□□□□□ -2.25
Lire1P11260 Gm25578-201ENSMUST00000083406 104 ntBASIC1.01□□□□□ -2.25
Lire1P11260 Gm14761-201ENSMUST00000121363 262 ntBASIC1□□□□□ -2.25
Lire1P11260 Gm26089-201ENSMUST00000157898 107 ntBASIC1□□□□□ -2.25
Lire1P11260 Gm19777-201ENSMUST00000191940 358 ntBASIC1□□□□□ -2.25
Lire1P11260 Gm44325-201ENSMUST00000196757 77 ntBASIC1□□□□□ -2.25
Lire1P11260 Olfr241-ps1-201ENSMUST00000197024 633 ntBASIC1□□□□□ -2.25
Lire1P11260 Gm44473-201ENSMUST00000204039 152 ntBASIC1□□□□□ -2.25
Lire1P11260 Gm24164-201ENSMUST00000093663 104 ntBASIC1□□□□□ -2.25
Lire1P11260 AC127302.3-201ENSMUST00000215480 2791 ntBASIC0.99□□□□□ -2.25
Lire1P11260 Trbv21-201ENSMUST00000103278 290 ntAPPRIS P1 BASIC0.99□□□□□ -2.25
Lire1P11260 Gm11798-201ENSMUST00000119150 421 ntBASIC0.99□□□□□ -2.25
Lire1P11260 Gm13565-201ENSMUST00000133596 700 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
Lire1P11260 Gm26401-201ENSMUST00000158502 76 ntBASIC0.99□□□□□ -2.25
Lire1P11260 Gm15446-203ENSMUST00000170826 192 ntTSL 5 BASIC0.99□□□□□ -2.25
Lire1P11260 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
Lire1P11260 Gm26727-201ENSMUST00000180773 366 ntAPPRIS P1 BASIC0.99□□□□□ -2.25
Lire1P11260 Mir6364-201ENSMUST00000183396 86 ntBASIC0.99□□□□□ -2.25
Lire1P11260 Gm27974-201ENSMUST00000183415 105 ntBASIC0.99□□□□□ -2.25
Lire1P11260 Gm42533-201ENSMUST00000196247 157 ntBASIC0.99□□□□□ -2.25
Lire1P11260 Gm43624-201ENSMUST00000197368 180 ntBASIC0.99□□□□□ -2.25
Lire1P11260 Gm44921-201ENSMUST00000205290 301 ntBASIC0.99□□□□□ -2.25
Retrieved 100 of 76,532 protein–RNA pairs in 87.2 ms