Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 Slco6c1-202ENSMUST00000189547 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
Col3a1P08121 Mir1b-201ENSMUST00000117012 122 ntBASIC2.18□□□□□ -2.06
Col3a1P08121 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC2.18□□□□□ -2.06
Col3a1P08121 Gm25391-201ENSMUST00000157342 134 ntBASIC2.18□□□□□ -2.06
Col3a1P08121 Gm29603-201ENSMUST00000186792 334 ntBASIC2.18□□□□□ -2.06
Col3a1P08121 Gm22620-201ENSMUST00000082700 133 ntBASIC2.18□□□□□ -2.06
Col3a1P08121 Gm23453-201ENSMUST00000083326 106 ntBASIC2.18□□□□□ -2.06
Col3a1P08121 Gm24762-201ENSMUST00000083689 104 ntBASIC2.18□□□□□ -2.06
Col3a1P08121 Gm26293-201ENSMUST00000104170 84 ntBASIC2.17□□□□□ -2.06
Col3a1P08121 Gm15282-201ENSMUST00000117707 300 ntBASIC2.17□□□□□ -2.06
Col3a1P08121 Gm22883-201ENSMUST00000157376 106 ntBASIC2.17□□□□□ -2.06
Col3a1P08121 Gm23331-201ENSMUST00000157423 108 ntBASIC2.17□□□□□ -2.06
Col3a1P08121 Gm5900-201ENSMUST00000179862 375 ntBASIC2.17□□□□□ -2.06
Col3a1P08121 Scgb2b14-ps-201ENSMUST00000189424 336 ntBASIC2.17□□□□□ -2.06
Col3a1P08121 Gm44182-201ENSMUST00000204052 115 ntBASIC2.17□□□□□ -2.06
Col3a1P08121 Gm19563-201ENSMUST00000222031 270 ntBASIC2.17□□□□□ -2.06
Col3a1P08121 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
Col3a1P08121 Gm22761-201ENSMUST00000102278 96 ntBASIC2.16□□□□□ -2.06
Col3a1P08121 Gm26080-201ENSMUST00000104069 131 ntBASIC2.16□□□□□ -2.06
Col3a1P08121 Gm23013-201ENSMUST00000104146 106 ntBASIC2.16□□□□□ -2.06
Col3a1P08121 Gm25543-201ENSMUST00000122678 312 ntBASIC2.16□□□□□ -2.06
Col3a1P08121 Gm23713-201ENSMUST00000157353 70 ntBASIC2.16□□□□□ -2.06
Col3a1P08121 Gm22349-201ENSMUST00000157864 107 ntBASIC2.16□□□□□ -2.06
Col3a1P08121 Gm22615-201ENSMUST00000158102 70 ntBASIC2.16□□□□□ -2.06
Col3a1P08121 Gm22476-201ENSMUST00000158902 100 ntBASIC2.16□□□□□ -2.06
Col3a1P08121 Gm22853-201ENSMUST00000174974 131 ntBASIC2.16□□□□□ -2.06
Col3a1P08121 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC2.16□□□□□ -2.06
Col3a1P08121 Gm45687-201ENSMUST00000209454 155 ntBASIC2.16□□□□□ -2.06
Col3a1P08121 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC2.16□□□□□ -2.06
Col3a1P08121 Gm23462-201ENSMUST00000083264 104 ntBASIC2.16□□□□□ -2.06
Col3a1P08121 Mir148b-201ENSMUST00000083626 97 ntBASIC2.16□□□□□ -2.06
Col3a1P08121 Snora33-201ENSMUST00000093556 129 ntBASIC2.16□□□□□ -2.06
Col3a1P08121 AC117226.1-201ENSMUST00000221635 3737 ntBASIC2.15□□□□□ -2.06
Col3a1P08121 Vmn2r74-201ENSMUST00000166355 2562 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.06
Col3a1P08121 Gm22779-201ENSMUST00000104085 107 ntBASIC2.15□□□□□ -2.06
Col3a1P08121 Gm14020-201ENSMUST00000118165 662 ntBASIC2.15□□□□□ -2.06
Col3a1P08121 Gm14069-201ENSMUST00000120815 229 ntBASIC2.15□□□□□ -2.06
Col3a1P08121 Gm17161-201ENSMUST00000169187 524 ntBASIC2.15□□□□□ -2.06
Col3a1P08121 Gm25457-201ENSMUST00000179509 107 ntBASIC2.15□□□□□ -2.06
Col3a1P08121 Olfr948-202ENSMUST00000216132 4164 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
Col3a1P08121 Gm14914-201ENSMUST00000117576 2031 ntBASIC2.15□□□□□ -2.07
Col3a1P08121 Gm37331-201ENSMUST00000192367 3375 ntBASIC2.15□□□□□ -2.07
Col3a1P08121 Gm15714-201ENSMUST00000117168 250 ntBASIC2.14□□□□□ -2.07
Col3a1P08121 Gm14882-201ENSMUST00000117216 218 ntBASIC2.14□□□□□ -2.07
Col3a1P08121 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC2.14□□□□□ -2.07
Col3a1P08121 Gm25424-201ENSMUST00000157612 58 ntBASIC2.14□□□□□ -2.07
Col3a1P08121 Gm22966-201ENSMUST00000157957 129 ntBASIC2.14□□□□□ -2.07
Col3a1P08121 Gm6788-201ENSMUST00000166459 270 ntBASIC2.14□□□□□ -2.07
Col3a1P08121 Gm28000-201ENSMUST00000184380 85 ntBASIC2.14□□□□□ -2.07
Col3a1P08121 Gm28794-201ENSMUST00000185276 136 ntBASIC2.14□□□□□ -2.07
Col3a1P08121 Gm29658-201ENSMUST00000185404 230 ntBASIC2.14□□□□□ -2.07
Col3a1P08121 Igkv1-108-201ENSMUST00000198926 298 ntBASIC2.14□□□□□ -2.07
Col3a1P08121 AC132615.1-201ENSMUST00000213873 255 ntBASIC2.14□□□□□ -2.07
Col3a1P08121 AC093316.2-201ENSMUST00000220015 172 ntTSL 5 BASIC2.14□□□□□ -2.07
Col3a1P08121 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Col3a1P08121 Adgrg4-204ENSMUST00000153784 9329 ntAPPRIS P5 TSL 5 BASIC2.14□□□□□ -2.07
Col3a1P08121 Gm13797-201ENSMUST00000121792 120 ntBASIC2.14□□□□□ -2.07
Col3a1P08121 Gm14629-201ENSMUST00000122428 144 ntBASIC2.14□□□□□ -2.07
Col3a1P08121 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
Col3a1P08121 Gm34599-201ENSMUST00000198924 288 ntTSL 3 BASIC2.14□□□□□ -2.07
Col3a1P08121 Gm45543-201ENSMUST00000209327 88 ntBASIC2.14□□□□□ -2.07
Col3a1P08121 Gm18502-201ENSMUST00000218679 199 ntBASIC2.14□□□□□ -2.07
Col3a1P08121 CU062626.2-201ENSMUST00000223953 274 ntBASIC2.14□□□□□ -2.07
Col3a1P08121 AC154262.1-201ENSMUST00000225976 286 ntBASIC2.14□□□□□ -2.07
Col3a1P08121 Olfr606-203ENSMUST00000217250 2313 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Col3a1P08121 Olfr659-202ENSMUST00000214986 4842 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Col3a1P08121 Gm23053-201ENSMUST00000175136 96 ntBASIC2.13□□□□□ -2.07
Col3a1P08121 Mir5136-201ENSMUST00000175573 76 ntBASIC2.13□□□□□ -2.07
Col3a1P08121 Gm23267-201ENSMUST00000178490 132 ntBASIC2.13□□□□□ -2.07
Col3a1P08121 Gm25895-201ENSMUST00000083714 100 ntBASIC2.13□□□□□ -2.07
Col3a1P08121 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
Col3a1P08121 BC022960-201ENSMUST00000119987 1815 ntBASIC2.13□□□□□ -2.07
Col3a1P08121 AC132221.1-201ENSMUST00000220577 3841 ntBASIC2.12□□□□□ -2.07
Col3a1P08121 Gm24276-201ENSMUST00000102181 110 ntBASIC2.12□□□□□ -2.07
Col3a1P08121 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
Col3a1P08121 Gm24280-201ENSMUST00000104237 134 ntBASIC2.12□□□□□ -2.07
Col3a1P08121 Gm10959-201ENSMUST00000106431 72 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
Col3a1P08121 Gm25279-201ENSMUST00000122608 133 ntBASIC2.12□□□□□ -2.07
Col3a1P08121 Gm23536-201ENSMUST00000157541 134 ntBASIC2.12□□□□□ -2.07
Col3a1P08121 Gm25888-201ENSMUST00000157778 302 ntBASIC2.12□□□□□ -2.07
Col3a1P08121 Gm26403-201ENSMUST00000158500 105 ntBASIC2.12□□□□□ -2.07
Col3a1P08121 Gm22139-201ENSMUST00000158747 105 ntBASIC2.12□□□□□ -2.07
Col3a1P08121 Gm16546-201ENSMUST00000159442 355 ntBASIC2.12□□□□□ -2.07
Col3a1P08121 Gm23967-201ENSMUST00000175062 78 ntBASIC2.12□□□□□ -2.07
Col3a1P08121 Gm24086-201ENSMUST00000175171 98 ntBASIC2.12□□□□□ -2.07
Col3a1P08121 Gm24656-201ENSMUST00000177548 132 ntBASIC2.12□□□□□ -2.07
Col3a1P08121 Gm25020-201ENSMUST00000178071 107 ntBASIC2.12□□□□□ -2.07
Col3a1P08121 Gm42988-201ENSMUST00000198116 225 ntBASIC2.12□□□□□ -2.07
Col3a1P08121 Gm44490-201ENSMUST00000198566 127 ntBASIC2.12□□□□□ -2.07
Col3a1P08121 Gm43199-201ENSMUST00000200019 307 ntBASIC2.12□□□□□ -2.07
Col3a1P08121 AC122484.1-201ENSMUST00000221578 177 ntBASIC2.12□□□□□ -2.07
Col3a1P08121 AC165106.2-201ENSMUST00000226749 97 ntBASIC2.12□□□□□ -2.07
Col3a1P08121 Gm25634-201ENSMUST00000082667 105 ntBASIC2.12□□□□□ -2.07
Col3a1P08121 Mir423-201ENSMUST00000083584 109 ntBASIC2.12□□□□□ -2.07
Col3a1P08121 Vmn1r30-203ENSMUST00000227466 1798 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
Col3a1P08121 Gm22003-201ENSMUST00000101885 107 ntBASIC2.11□□□□□ -2.07
Col3a1P08121 Gm23492-201ENSMUST00000116837 115 ntBASIC2.11□□□□□ -2.07
Col3a1P08121 Gm25269-201ENSMUST00000122601 104 ntBASIC2.11□□□□□ -2.07
Col3a1P08121 Gm25961-201ENSMUST00000157174 135 ntBASIC2.11□□□□□ -2.07
Col3a1P08121 Gm22756-201ENSMUST00000180118 107 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 156.9 ms