Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Gm24440-201ENSMUST00000157236 63 ntBASIC1.33□□□□□ -2.2
P06344 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.33□□□□□ -2.2
P06344 Gm23558-201ENSMUST00000157823 80 ntBASIC1.33□□□□□ -2.2
P06344 Gm24512-201ENSMUST00000174963 65 ntBASIC1.33□□□□□ -2.2
P06344 Gm25958-201ENSMUST00000175114 71 ntBASIC1.33□□□□□ -2.2
P06344 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
P06344 Rpl23a-ps7-201ENSMUST00000185437 460 ntBASIC1.33□□□□□ -2.2
P06344 Gm28881-201ENSMUST00000187710 470 ntTSL 3 BASIC1.33□□□□□ -2.2
P06344 Gm28434-201ENSMUST00000187738 500 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
P06344 Gm19777-201ENSMUST00000191940 358 ntBASIC1.33□□□□□ -2.2
P06344 Trav15d-3-201ENSMUST00000198604 167 ntBASIC1.33□□□□□ -2.2
P06344 Olfr454-ps1-201ENSMUST00000205206 348 ntBASIC1.33□□□□□ -2.2
P06344 AC116460.1-201ENSMUST00000219040 313 ntBASIC1.33□□□□□ -2.2
P06344 AC069074.1-201ENSMUST00000220048 381 ntBASIC1.33□□□□□ -2.2
P06344 AC154552.1-201ENSMUST00000222969 202 ntBASIC1.33□□□□□ -2.2
P06344 Olfr821-203ENSMUST00000214177 1929 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
P06344 Mir767-201ENSMUST00000103256 107 ntBASIC1.32□□□□□ -2.2
P06344 Mir873a-201ENSMUST00000104863 77 ntBASIC1.32□□□□□ -2.2
P06344 Fau-ps1-201ENSMUST00000119675 252 ntBASIC1.32□□□□□ -2.2
P06344 Gm15213-201ENSMUST00000122098 216 ntBASIC1.32□□□□□ -2.2
P06344 Gm24847-201ENSMUST00000158032 108 ntBASIC1.32□□□□□ -2.2
P06344 Gm23221-201ENSMUST00000158118 93 ntBASIC1.32□□□□□ -2.2
P06344 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC1.32□□□□□ -2.2
P06344 Gm28849-201ENSMUST00000188127 174 ntBASIC1.32□□□□□ -2.2
P06344 Gm28330-201ENSMUST00000190353 171 ntBASIC1.32□□□□□ -2.2
P06344 Gm44373-201ENSMUST00000196112 169 ntBASIC1.32□□□□□ -2.2
P06344 Gm43406-201ENSMUST00000200356 334 ntBASIC1.32□□□□□ -2.2
P06344 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.32□□□□□ -2.2
P06344 Gm10092-201ENSMUST00000077110 180 ntBASIC1.32□□□□□ -2.2
P06344 Gm25513-201ENSMUST00000083861 162 ntBASIC1.32□□□□□ -2.2
P06344 Olfr8-203ENSMUST00000214952 3407 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
P06344 Gm29308-201ENSMUST00000188863 315 ntBASIC1.31□□□□□ -2.2
P06344 Gm33866-201ENSMUST00000196911 289 ntBASIC1.31□□□□□ -2.2
P06344 AC154245.1-201ENSMUST00000224615 601 ntBASIC1.31□□□□□ -2.2
P06344 Gm24966-201ENSMUST00000082443 79 ntBASIC1.31□□□□□ -2.2
P06344 Gm26135-201ENSMUST00000101993 72 ntBASIC1.3□□□□□ -2.2
P06344 Mir223-201ENSMUST00000102112 110 ntBASIC1.3□□□□□ -2.2
P06344 Gm23492-201ENSMUST00000116837 115 ntBASIC1.3□□□□□ -2.2
P06344 Gm23208-201ENSMUST00000158666 127 ntBASIC1.3□□□□□ -2.2
P06344 Gm17113-201ENSMUST00000170118 171 ntBASIC1.3□□□□□ -2.2
P06344 Snord50b-201ENSMUST00000178497 72 ntBASIC1.3□□□□□ -2.2
P06344 Gm38060-201ENSMUST00000194822 464 ntBASIC1.3□□□□□ -2.2
P06344 AC173482.5-201ENSMUST00000224181 327 ntBASIC1.3□□□□□ -2.2
P06344 AC126939.3-201ENSMUST00000226061 166 ntBASIC1.3□□□□□ -2.2
P06344 Gm25636-201ENSMUST00000082666 133 ntBASIC1.3□□□□□ -2.2
P06344 Gm10509-201ENSMUST00000097384 259 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
P06344 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
P06344 Gm44352-201ENSMUST00000196358 110 ntBASIC1.29□□□□□ -2.2
P06344 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC1.29□□□□□ -2.2
P06344 Gm19855-201ENSMUST00000210145 249 ntBASIC1.29□□□□□ -2.2
P06344 Gm19572-201ENSMUST00000214326 338 ntBASIC1.29□□□□□ -2.2
P06344 AC154636.2-201ENSMUST00000222538 161 ntBASIC1.29□□□□□ -2.2
P06344 Gm24042-201ENSMUST00000083114 103 ntBASIC1.29□□□□□ -2.2
P06344 Mir155-201ENSMUST00000083463 65 ntBASIC1.29□□□□□ -2.2
P06344 Gm25992-201ENSMUST00000102437 109 ntBASIC1.28□□□□□ -2.2
P06344 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
P06344 Gm14919-201ENSMUST00000120839 390 ntBASIC1.28□□□□□ -2.2
P06344 Gm14922-201ENSMUST00000121131 163 ntBASIC1.28□□□□□ -2.2
P06344 Gm26479-201ENSMUST00000122620 106 ntBASIC1.28□□□□□ -2.2
P06344 Gm23982-201ENSMUST00000157141 106 ntBASIC1.28□□□□□ -2.2
P06344 Gm22321-201ENSMUST00000157152 104 ntBASIC1.28□□□□□ -2.2
P06344 Gm22082-201ENSMUST00000157587 161 ntBASIC1.28□□□□□ -2.2
P06344 Gm23640-201ENSMUST00000157860 104 ntBASIC1.28□□□□□ -2.2
P06344 Gm24229-201ENSMUST00000158830 118 ntBASIC1.28□□□□□ -2.2
P06344 Gm24366-201ENSMUST00000175383 86 ntBASIC1.28□□□□□ -2.2
P06344 Gm27521-201ENSMUST00000184022 64 ntBASIC1.28□□□□□ -2.2
P06344 Gm27517-201ENSMUST00000184347 236 ntBASIC1.28□□□□□ -2.2
P06344 Mir7241-201ENSMUST00000184532 64 ntBASIC1.28□□□□□ -2.2
P06344 Gm28537-201ENSMUST00000189026 315 ntBASIC1.28□□□□□ -2.2
P06344 Gm19123-201ENSMUST00000190716 651 ntBASIC1.28□□□□□ -2.2
P06344 Gm29631-201ENSMUST00000191065 315 ntBASIC1.28□□□□□ -2.2
P06344 Gm42774-201ENSMUST00000198854 283 ntBASIC1.28□□□□□ -2.2
P06344 Olfr515-ps1-201ENSMUST00000208389 189 ntBASIC1.28□□□□□ -2.2
P06344 CT485608.2-201ENSMUST00000227210 291 ntBASIC1.28□□□□□ -2.2
P06344 Gm25204-201ENSMUST00000082843 106 ntBASIC1.28□□□□□ -2.2
P06344 Gm26497-201ENSMUST00000083146 107 ntBASIC1.28□□□□□ -2.2
P06344 AC153964.2-201ENSMUST00000217704 2474 ntBASIC1.28□□□□□ -2.2
P06344 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC1.28□□□□□ -2.2
P06344 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
P06344 AC133934.2-201ENSMUST00000221729 4129 ntBASIC1.27□□□□□ -2.21
P06344 Mup-ps22-201ENSMUST00000121611 243 ntBASIC1.27□□□□□ -2.21
P06344 Gm24895-201ENSMUST00000122742 74 ntBASIC1.27□□□□□ -2.21
P06344 Gm10722-201ENSMUST00000151376 651 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
P06344 Gm23170-201ENSMUST00000157158 106 ntBASIC1.27□□□□□ -2.21
P06344 Gm24262-201ENSMUST00000157431 144 ntBASIC1.27□□□□□ -2.21
P06344 Gm23122-201ENSMUST00000157645 103 ntBASIC1.27□□□□□ -2.21
P06344 Gm24677-201ENSMUST00000158755 150 ntBASIC1.27□□□□□ -2.21
P06344 Gm17196-201ENSMUST00000164074 345 ntTSL 5 BASIC1.27□□□□□ -2.21
P06344 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
P06344 Gm27493-201ENSMUST00000184128 78 ntBASIC1.27□□□□□ -2.21
P06344 Gm28794-201ENSMUST00000185276 136 ntBASIC1.27□□□□□ -2.21
P06344 Gm20923-201ENSMUST00000190009 319 ntBASIC1.27□□□□□ -2.21
P06344 Gm21088-201ENSMUST00000190875 316 ntBASIC1.27□□□□□ -2.21
P06344 Vmn2r-ps102-203ENSMUST00000222739 604 ntTSL 5 BASIC1.27□□□□□ -2.21
P06344 Gm23039-201ENSMUST00000083870 161 ntBASIC1.27□□□□□ -2.21
P06344 Gm26339-201ENSMUST00000102368 99 ntBASIC1.26□□□□□ -2.21
P06344 Gm25875-201ENSMUST00000104323 107 ntBASIC1.26□□□□□ -2.21
P06344 Gm22279-201ENSMUST00000157200 93 ntBASIC1.26□□□□□ -2.21
P06344 Gm26022-201ENSMUST00000158663 108 ntBASIC1.26□□□□□ -2.21
P06344 Gm25936-201ENSMUST00000179952 114 ntBASIC1.26□□□□□ -2.21
Retrieved 100 of 76,532 protein–RNA pairs in 200.9 ms