Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Gm10719-202ENSMUST00000099049 675 ntAPPRIS ALT2 TSL 5 BASIC2.23□□□□□ -2.05
Best1O88870 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC2.23□□□□□ -2.05
Best1O88870 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC2.23□□□□□ -2.05
Best1O88870 Gm23705-201ENSMUST00000104370 130 ntBASIC2.22□□□□□ -2.05
Best1O88870 Gm22217-201ENSMUST00000157556 313 ntBASIC2.22□□□□□ -2.05
Best1O88870 Gm22553-201ENSMUST00000157797 295 ntBASIC2.22□□□□□ -2.05
Best1O88870 Gm27399-201ENSMUST00000184250 78 ntBASIC2.22□□□□□ -2.05
Best1O88870 Gm28376-201ENSMUST00000186604 176 ntTSL 5 BASIC2.22□□□□□ -2.05
Best1O88870 CU062626.2-201ENSMUST00000223953 274 ntBASIC2.22□□□□□ -2.05
Best1O88870 AC122242.1-201ENSMUST00000224650 304 ntBASIC2.22□□□□□ -2.05
Best1O88870 Gm25094-201ENSMUST00000103992 131 ntBASIC2.21□□□□□ -2.06
Best1O88870 Gm14652-201ENSMUST00000118479 235 ntBASIC2.21□□□□□ -2.06
Best1O88870 Gm23980-201ENSMUST00000157135 158 ntBASIC2.21□□□□□ -2.06
Best1O88870 Gm23172-201ENSMUST00000157160 124 ntBASIC2.21□□□□□ -2.06
Best1O88870 Gm25914-201ENSMUST00000157618 153 ntBASIC2.21□□□□□ -2.06
Best1O88870 Gm24769-201ENSMUST00000158506 129 ntBASIC2.21□□□□□ -2.06
Best1O88870 Gm23047-201ENSMUST00000177661 94 ntBASIC2.21□□□□□ -2.06
Best1O88870 Gm44477-201ENSMUST00000199661 110 ntBASIC2.21□□□□□ -2.06
Best1O88870 AC133517.1-203ENSMUST00000225570 390 ntBASIC2.21□□□□□ -2.06
Best1O88870 AC126691.1-201ENSMUST00000226534 202 ntBASIC2.21□□□□□ -2.06
Best1O88870 Gm23100-201ENSMUST00000083455 141 ntBASIC2.21□□□□□ -2.06
Best1O88870 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
Best1O88870 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC2.21□□□□□ -2.06
Best1O88870 Gm6185-201ENSMUST00000193379 3553 ntBASIC2.2□□□□□ -2.06
Best1O88870 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
Best1O88870 Snord70-201ENSMUST00000104157 87 ntBASIC2.2□□□□□ -2.06
Best1O88870 Gm16032-201ENSMUST00000118534 168 ntBASIC2.2□□□□□ -2.06
Best1O88870 Mir1967-201ENSMUST00000157789 82 ntBASIC2.2□□□□□ -2.06
Best1O88870 Gm23043-201ENSMUST00000157890 109 ntBASIC2.2□□□□□ -2.06
Best1O88870 Gm23665-201ENSMUST00000158054 62 ntBASIC2.2□□□□□ -2.06
Best1O88870 Gm17036-201ENSMUST00000168187 254 ntTSL 3 BASIC2.2□□□□□ -2.06
Best1O88870 Gm25707-201ENSMUST00000175120 96 ntBASIC2.2□□□□□ -2.06
Best1O88870 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC2.2□□□□□ -2.06
Best1O88870 Gm43563-201ENSMUST00000196761 198 ntBASIC2.2□□□□□ -2.06
Best1O88870 Mir7217-201ENSMUST00000200304 62 ntBASIC2.2□□□□□ -2.06
Best1O88870 Gm45859-201ENSMUST00000212794 214 ntBASIC2.2□□□□□ -2.06
Best1O88870 AC127578.1-201ENSMUST00000227289 93 ntBASIC2.2□□□□□ -2.06
Best1O88870 Gm24151-201ENSMUST00000082758 141 ntBASIC2.2□□□□□ -2.06
Best1O88870 Gm15314-201ENSMUST00000120740 1887 ntBASIC2.2□□□□□ -2.06
Best1O88870 Gm24595-201ENSMUST00000122501 110 ntBASIC2.19□□□□□ -2.06
Best1O88870 Gm23466-201ENSMUST00000157133 106 ntBASIC2.19□□□□□ -2.06
Best1O88870 Gm22279-201ENSMUST00000157200 93 ntBASIC2.19□□□□□ -2.06
Best1O88870 Gm25424-201ENSMUST00000157612 58 ntBASIC2.19□□□□□ -2.06
Best1O88870 Gm27402-201ENSMUST00000183890 120 ntBASIC2.19□□□□□ -2.06
Best1O88870 Gm37715-201ENSMUST00000193206 235 ntBASIC2.19□□□□□ -2.06
Best1O88870 Gm25357-201ENSMUST00000082745 72 ntBASIC2.19□□□□□ -2.06
Best1O88870 Gm24522-201ENSMUST00000083964 108 ntBASIC2.19□□□□□ -2.06
Best1O88870 Gm2869-201ENSMUST00000124359 2621 ntBASIC2.19□□□□□ -2.06
Best1O88870 Gm24121-201ENSMUST00000102029 106 ntBASIC2.18□□□□□ -2.06
Best1O88870 Mir223-201ENSMUST00000102112 110 ntBASIC2.18□□□□□ -2.06
Best1O88870 Gm2962-201ENSMUST00000159266 336 ntBASIC2.18□□□□□ -2.06
Best1O88870 Gm25642-201ENSMUST00000175137 66 ntBASIC2.18□□□□□ -2.06
Best1O88870 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC2.18□□□□□ -2.06
Best1O88870 Gm24261-201ENSMUST00000083744 104 ntBASIC2.18□□□□□ -2.06
Best1O88870 Ppp1r3a-201ENSMUST00000045096 6965 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
Best1O88870 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Best1O88870 Mir344e-201ENSMUST00000104677 66 ntBASIC2.17□□□□□ -2.06
Best1O88870 Gm23551-201ENSMUST00000116852 121 ntBASIC2.17□□□□□ -2.06
Best1O88870 Gm13797-201ENSMUST00000121792 120 ntBASIC2.17□□□□□ -2.06
Best1O88870 Gm25333-201ENSMUST00000158035 246 ntBASIC2.17□□□□□ -2.06
Best1O88870 Gm22433-201ENSMUST00000158550 142 ntBASIC2.17□□□□□ -2.06
Best1O88870 Gm25035-201ENSMUST00000175414 77 ntBASIC2.17□□□□□ -2.06
Best1O88870 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC2.17□□□□□ -2.06
Best1O88870 Gm29613-201ENSMUST00000185846 313 ntBASIC2.17□□□□□ -2.06
Best1O88870 Gm29544-201ENSMUST00000188860 313 ntBASIC2.17□□□□□ -2.06
Best1O88870 Gm28808-201ENSMUST00000190978 313 ntBASIC2.17□□□□□ -2.06
Best1O88870 Ighv12-2-201ENSMUST00000191949 362 ntBASIC2.17□□□□□ -2.06
Best1O88870 Gm42719-201ENSMUST00000197393 355 ntBASIC2.17□□□□□ -2.06
Best1O88870 Gm25142-201ENSMUST00000082698 107 ntBASIC2.17□□□□□ -2.06
Best1O88870 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC2.17□□□□□ -2.06
Best1O88870 Gm22947-201ENSMUST00000158559 91 ntBASIC2.16□□□□□ -2.06
Best1O88870 Trav5n-3-201ENSMUST00000164511 270 ntBASIC2.16□□□□□ -2.06
Best1O88870 Gm27517-201ENSMUST00000184347 236 ntBASIC2.16□□□□□ -2.06
Best1O88870 Mir6419-201ENSMUST00000184784 113 ntBASIC2.16□□□□□ -2.06
Best1O88870 Gm27959-201ENSMUST00000185172 111 ntBASIC2.16□□□□□ -2.06
Best1O88870 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC2.16□□□□□ -2.06
Best1O88870 AC154213.2-201ENSMUST00000227138 187 ntBASIC2.16□□□□□ -2.06
Best1O88870 Olfr1181-203ENSMUST00000213190 3934 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Best1O88870 Gm25538-201ENSMUST00000101943 107 ntBASIC2.15□□□□□ -2.07
Best1O88870 Gm22051-201ENSMUST00000117002 127 ntBASIC2.15□□□□□ -2.07
Best1O88870 Gm6897-201ENSMUST00000117714 138 ntBASIC2.15□□□□□ -2.07
Best1O88870 Gm14758-201ENSMUST00000119104 138 ntBASIC2.15□□□□□ -2.07
Best1O88870 Gm15692-201ENSMUST00000152173 352 ntBASIC2.15□□□□□ -2.07
Best1O88870 Gm22227-201ENSMUST00000157356 259 ntBASIC2.15□□□□□ -2.07
Best1O88870 Gm22145-201ENSMUST00000157396 148 ntBASIC2.15□□□□□ -2.07
Best1O88870 Gm24010-201ENSMUST00000157731 282 ntBASIC2.15□□□□□ -2.07
Best1O88870 Gm24900-201ENSMUST00000158128 134 ntBASIC2.15□□□□□ -2.07
Best1O88870 Mir669k-201ENSMUST00000177742 127 ntBASIC2.15□□□□□ -2.07
Best1O88870 Gm25673-201ENSMUST00000179957 127 ntBASIC2.15□□□□□ -2.07
Best1O88870 Gm33866-201ENSMUST00000196911 289 ntBASIC2.15□□□□□ -2.07
Best1O88870 Gm24661-201ENSMUST00000083205 104 ntBASIC2.15□□□□□ -2.07
Best1O88870 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC2.15□□□□□ -2.07
Best1O88870 Olfr1442-204ENSMUST00000208657 3148 ntAPPRIS P1 TSL 3 BASIC2.14□□□□□ -2.07
Best1O88870 Gm12941-201ENSMUST00000117934 220 ntBASIC2.14□□□□□ -2.07
Best1O88870 Gm25910-201ENSMUST00000157620 140 ntBASIC2.14□□□□□ -2.07
Best1O88870 Gm28020-201ENSMUST00000157739 67 ntBASIC2.14□□□□□ -2.07
Best1O88870 Gm26024-201ENSMUST00000158657 322 ntBASIC2.14□□□□□ -2.07
Best1O88870 Gm22093-201ENSMUST00000158980 111 ntBASIC2.14□□□□□ -2.07
Best1O88870 C920009B18Rik-204ENSMUST00000181733 123 ntBASIC2.14□□□□□ -2.07
Best1O88870 Mir497-201ENSMUST00000200557 84 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 117.6 ms