Protein–RNA interactions for Protein: O88609

Lmx1b, LIM homeobox transcription factor 1-beta, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmx1bO88609 Gm29603-201ENSMUST00000186792 334 ntBASIC2.28□□□□□ -2.04
Lmx1bO88609 Gm15235-201ENSMUST00000200572 194 ntBASIC2.28□□□□□ -2.04
Lmx1bO88609 CT025579.1-201ENSMUST00000223779 366 ntBASIC2.28□□□□□ -2.04
Lmx1bO88609 CT030645.1-201ENSMUST00000224020 231 ntBASIC2.28□□□□□ -2.04
Lmx1bO88609 Gm10217-201ENSMUST00000088080 135 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
Lmx1bO88609 Olfr1201-203ENSMUST00000216213 2602 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
Lmx1bO88609 Olfr1477-202ENSMUST00000217001 4000 ntAPPRIS P1 TSL 2 BASIC2.27□□□□□ -2.05
Lmx1bO88609 Olfr623-202ENSMUST00000213840 3980 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
Lmx1bO88609 Gm23320-201ENSMUST00000104462 127 ntBASIC2.27□□□□□ -2.05
Lmx1bO88609 Gm22373-201ENSMUST00000104584 89 ntBASIC2.27□□□□□ -2.05
Lmx1bO88609 Gm26473-201ENSMUST00000116763 127 ntBASIC2.27□□□□□ -2.05
Lmx1bO88609 Gm24595-201ENSMUST00000122501 110 ntBASIC2.27□□□□□ -2.05
Lmx1bO88609 Gm12510-201ENSMUST00000152190 362 ntTSL 5 BASIC2.27□□□□□ -2.05
Lmx1bO88609 Gm22349-201ENSMUST00000157864 107 ntBASIC2.27□□□□□ -2.05
Lmx1bO88609 Gm22967-201ENSMUST00000157956 239 ntBASIC2.27□□□□□ -2.05
Lmx1bO88609 Mir5118-201ENSMUST00000175551 67 ntBASIC2.27□□□□□ -2.05
Lmx1bO88609 Gm27698-201ENSMUST00000184060 249 ntBASIC2.27□□□□□ -2.05
Lmx1bO88609 Gm6801-201ENSMUST00000190697 339 ntBASIC2.27□□□□□ -2.05
Lmx1bO88609 Gm24410-201ENSMUST00000083433 107 ntBASIC2.27□□□□□ -2.05
Lmx1bO88609 Gm37566-201ENSMUST00000192363 4355 ntBASIC2.26□□□□□ -2.05
Lmx1bO88609 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC2.26□□□□□ -2.05
Lmx1bO88609 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC2.26□□□□□ -2.05
Lmx1bO88609 Gm22935-201ENSMUST00000103960 104 ntBASIC2.26□□□□□ -2.05
Lmx1bO88609 Gm6954-201ENSMUST00000117416 225 ntBASIC2.26□□□□□ -2.05
Lmx1bO88609 Gm44666-201ENSMUST00000208544 391 ntBASIC2.26□□□□□ -2.05
Lmx1bO88609 Gm18346-201ENSMUST00000216782 325 ntBASIC2.26□□□□□ -2.05
Lmx1bO88609 AC126672.1-201ENSMUST00000217096 396 ntBASIC2.26□□□□□ -2.05
Lmx1bO88609 AC134601.1-201ENSMUST00000221058 109 ntBASIC2.26□□□□□ -2.05
Lmx1bO88609 Gm25136-201ENSMUST00000083253 115 ntBASIC2.26□□□□□ -2.05
Lmx1bO88609 Adgrg4-205ENSMUST00000154818 8857 ntAPPRIS ALT2 TSL 5 BASIC2.26□□□□□ -2.05
Lmx1bO88609 Gm15314-201ENSMUST00000120740 1887 ntBASIC2.26□□□□□ -2.05
Lmx1bO88609 Olfr1218-203ENSMUST00000215048 3900 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
Lmx1bO88609 Gm13757-202ENSMUST00000179450 4383 ntAPPRIS P1 TSL 2 BASIC2.25□□□□□ -2.05
Lmx1bO88609 Gm22752-201ENSMUST00000102083 109 ntBASIC2.25□□□□□ -2.05
Lmx1bO88609 Gm13560-201ENSMUST00000121865 329 ntBASIC2.25□□□□□ -2.05
Lmx1bO88609 Gm26049-201ENSMUST00000157313 108 ntBASIC2.25□□□□□ -2.05
Lmx1bO88609 Gm23858-201ENSMUST00000158384 106 ntBASIC2.25□□□□□ -2.05
Lmx1bO88609 Gm23337-201ENSMUST00000158959 118 ntBASIC2.25□□□□□ -2.05
Lmx1bO88609 Mir3075-201ENSMUST00000175340 85 ntBASIC2.25□□□□□ -2.05
Lmx1bO88609 AC125167.1-201ENSMUST00000198698 141 ntBASIC2.25□□□□□ -2.05
Lmx1bO88609 AC124104.1-201ENSMUST00000226279 417 ntBASIC2.25□□□□□ -2.05
Lmx1bO88609 Gm23138-201ENSMUST00000083365 103 ntBASIC2.25□□□□□ -2.05
Lmx1bO88609 AC154515.1-201ENSMUST00000226085 2841 ntBASIC2.25□□□□□ -2.05
Lmx1bO88609 Mir669b-201ENSMUST00000102172 97 ntBASIC2.24□□□□□ -2.05
Lmx1bO88609 Gm14536-201ENSMUST00000118324 138 ntBASIC2.24□□□□□ -2.05
Lmx1bO88609 Gm15027-201ENSMUST00000120922 138 ntBASIC2.24□□□□□ -2.05
Lmx1bO88609 Gm22477-201ENSMUST00000122569 316 ntBASIC2.24□□□□□ -2.05
Lmx1bO88609 Gm22221-201ENSMUST00000157362 103 ntBASIC2.24□□□□□ -2.05
Lmx1bO88609 Gm22099-201ENSMUST00000157925 123 ntBASIC2.24□□□□□ -2.05
Lmx1bO88609 Gm26160-201ENSMUST00000158965 63 ntBASIC2.24□□□□□ -2.05
Lmx1bO88609 Gm25642-201ENSMUST00000175137 66 ntBASIC2.24□□□□□ -2.05
Lmx1bO88609 Gm37037-201ENSMUST00000194475 424 ntBASIC2.24□□□□□ -2.05
Lmx1bO88609 Gm44481-201ENSMUST00000197288 84 ntBASIC2.24□□□□□ -2.05
Lmx1bO88609 Gm44482-201ENSMUST00000199232 103 ntBASIC2.24□□□□□ -2.05
Lmx1bO88609 Gm44339-201ENSMUST00000200598 84 ntBASIC2.24□□□□□ -2.05
Lmx1bO88609 Gm22686-201ENSMUST00000082847 100 ntBASIC2.24□□□□□ -2.05
Lmx1bO88609 Mir186-201ENSMUST00000083497 71 ntBASIC2.24□□□□□ -2.05
Lmx1bO88609 Olfr576-201ENSMUST00000098213 3132 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
Lmx1bO88609 Olfr58-202ENSMUST00000215112 2454 ntAPPRIS P1 TSL 2 BASIC2.24□□□□□ -2.05
Lmx1bO88609 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
Lmx1bO88609 n-R5s158-201ENSMUST00000104095 118 ntBASIC2.23□□□□□ -2.05
Lmx1bO88609 Gm23015-201ENSMUST00000104145 128 ntBASIC2.23□□□□□ -2.05
Lmx1bO88609 Snora36b-201ENSMUST00000104383 132 ntBASIC2.23□□□□□ -2.05
Lmx1bO88609 Gm26342-201ENSMUST00000104557 129 ntBASIC2.23□□□□□ -2.05
Lmx1bO88609 Gm23803-201ENSMUST00000104610 132 ntBASIC2.23□□□□□ -2.05
Lmx1bO88609 Gm24598-201ENSMUST00000122510 74 ntBASIC2.23□□□□□ -2.05
Lmx1bO88609 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC2.23□□□□□ -2.05
Lmx1bO88609 Gm23600-201ENSMUST00000157260 71 ntBASIC2.23□□□□□ -2.05
Lmx1bO88609 Gm25488-201ENSMUST00000158728 118 ntBASIC2.23□□□□□ -2.05
Lmx1bO88609 Gm6060-201ENSMUST00000188671 251 ntBASIC2.23□□□□□ -2.05
Lmx1bO88609 Igkv2-93-1-201ENSMUST00000196774 272 ntBASIC2.23□□□□□ -2.05
Lmx1bO88609 Gm9251-201ENSMUST00000197202 628 ntBASIC2.23□□□□□ -2.05
Lmx1bO88609 Gm24615-201ENSMUST00000083268 113 ntBASIC2.23□□□□□ -2.05
Lmx1bO88609 Gm43473-201ENSMUST00000200442 5997 ntBASIC2.23□□□□□ -2.05
Lmx1bO88609 Olfr974-202ENSMUST00000213246 3561 ntAPPRIS P1 TSL 2 BASIC2.23□□□□□ -2.05
Lmx1bO88609 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
Lmx1bO88609 Olfr726-204ENSMUST00000215105 1752 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
Lmx1bO88609 Gm26015-201ENSMUST00000104402 125 ntBASIC2.22□□□□□ -2.05
Lmx1bO88609 Gm23889-201ENSMUST00000122689 104 ntBASIC2.22□□□□□ -2.05
Lmx1bO88609 Gm25866-201ENSMUST00000158245 112 ntBASIC2.22□□□□□ -2.05
Lmx1bO88609 Snord11-201ENSMUST00000158468 84 ntBASIC2.22□□□□□ -2.05
Lmx1bO88609 Gm16584-201ENSMUST00000159267 189 ntBASIC2.22□□□□□ -2.05
Lmx1bO88609 Gm27369-201ENSMUST00000185182 71 ntBASIC2.22□□□□□ -2.05
Lmx1bO88609 Gm25124-201ENSMUST00000083345 164 ntBASIC2.22□□□□□ -2.05
Lmx1bO88609 Mir127-201ENSMUST00000093568 70 ntBASIC2.22□□□□□ -2.05
Lmx1bO88609 Gm23947-201ENSMUST00000093636 107 ntBASIC2.22□□□□□ -2.05
Lmx1bO88609 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
Lmx1bO88609 Gm37664-201ENSMUST00000194607 3813 ntBASIC2.22□□□□□ -2.05
Lmx1bO88609 AC160984.1-201ENSMUST00000225855 3154 ntBASIC2.21□□□□□ -2.06
Lmx1bO88609 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
Lmx1bO88609 Mir374b-201ENSMUST00000102314 95 ntBASIC2.21□□□□□ -2.06
Lmx1bO88609 Gm13200-201ENSMUST00000138802 258 ntTSL 3 BASIC2.21□□□□□ -2.06
Lmx1bO88609 C630028M04Rik-201ENSMUST00000141452 3387 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
Lmx1bO88609 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC2.21□□□□□ -2.06
Lmx1bO88609 Gm23718-201ENSMUST00000157350 307 ntBASIC2.21□□□□□ -2.06
Lmx1bO88609 Gm23665-201ENSMUST00000158054 62 ntBASIC2.21□□□□□ -2.06
Lmx1bO88609 Gm24390-201ENSMUST00000179578 62 ntBASIC2.21□□□□□ -2.06
Lmx1bO88609 Mir6905-201ENSMUST00000184228 70 ntBASIC2.21□□□□□ -2.06
Lmx1bO88609 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC2.21□□□□□ -2.06
Lmx1bO88609 Ttn-225ENSMUST00000190813 300 ntTSL 5 BASIC2.21□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 96 ms