Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 CT033781.2-201ENSMUST00000221113 153 ntBASIC0.56□□□□□ -2.32
Cops4O88544 Gm22704-201ENSMUST00000083027 137 ntBASIC0.56□□□□□ -2.32
Cops4O88544 Gm24523-201ENSMUST00000083965 132 ntBASIC0.56□□□□□ -2.32
Cops4O88544 Mir362-201ENSMUST00000093592 65 ntBASIC0.56□□□□□ -2.32
Cops4O88544 Gm24163-201ENSMUST00000093660 132 ntBASIC0.56□□□□□ -2.32
Cops4O88544 Gm11386-201ENSMUST00000117761 347 ntBASIC0.55□□□□□ -2.32
Cops4O88544 Gm22447-201ENSMUST00000158155 92 ntBASIC0.55□□□□□ -2.32
Cops4O88544 Gm23355-201ENSMUST00000177614 107 ntBASIC0.55□□□□□ -2.32
Cops4O88544 Gm26180-201ENSMUST00000179942 107 ntBASIC0.55□□□□□ -2.32
Cops4O88544 AC114916.1-201ENSMUST00000228465 494 ntBASIC0.55□□□□□ -2.32
Cops4O88544 Gm25697-201ENSMUST00000082902 98 ntBASIC0.55□□□□□ -2.32
Cops4O88544 Gm23721-201ENSMUST00000083005 107 ntBASIC0.55□□□□□ -2.32
Cops4O88544 Gm14980-201ENSMUST00000121247 736 ntBASIC0.54□□□□□ -2.32
Cops4O88544 Gm23996-201ENSMUST00000158062 131 ntBASIC0.54□□□□□ -2.32
Cops4O88544 Gm6657-203ENSMUST00000188791 531 ntAPPRIS ALT2 TSL 5 BASIC0.54□□□□□ -2.32
Cops4O88544 Gm45119-201ENSMUST00000207612 199 ntBASIC0.54□□□□□ -2.32
Cops4O88544 Gm45704-201ENSMUST00000212582 403 ntBASIC0.54□□□□□ -2.32
Cops4O88544 AC116589.1-201ENSMUST00000220634 327 ntBASIC0.54□□□□□ -2.32
Cops4O88544 AC116589.3-202ENSMUST00000221770 649 ntBASIC0.54□□□□□ -2.32
Cops4O88544 AC116589.6-201ENSMUST00000222252 649 ntBASIC0.54□□□□□ -2.32
Cops4O88544 Gm22743-201ENSMUST00000083445 133 ntBASIC0.54□□□□□ -2.32
Cops4O88544 Traj13-201ENSMUST00000103728 57 ntAPPRIS P1 BASIC0.53□□□□□ -2.32
Cops4O88544 Gm15379-201ENSMUST00000121224 648 ntBASIC0.53□□□□□ -2.32
Cops4O88544 Gm15899-201ENSMUST00000128586 238 ntBASIC0.53□□□□□ -2.32
Cops4O88544 Zfp969-202ENSMUST00000131041 252 ntTSL 2 BASIC0.53□□□□□ -2.32
Cops4O88544 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC0.53□□□□□ -2.32
Cops4O88544 Gm26393-201ENSMUST00000157625 129 ntBASIC0.53□□□□□ -2.32
Cops4O88544 Gm23898-201ENSMUST00000158111 103 ntBASIC0.53□□□□□ -2.32
Cops4O88544 Gm36956-201ENSMUST00000193830 214 ntBASIC0.53□□□□□ -2.32
Cops4O88544 Olfr1435-ps1-201ENSMUST00000207773 249 ntBASIC0.53□□□□□ -2.32
Cops4O88544 Snord33-201ENSMUST00000083694 84 ntBASIC0.53□□□□□ -2.32
Cops4O88544 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC0.53□□□□□ -2.33
Cops4O88544 Gm15632-201ENSMUST00000135936 246 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
Cops4O88544 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC0.52□□□□□ -2.33
Cops4O88544 Gm27656-201ENSMUST00000185055 80 ntBASIC0.52□□□□□ -2.33
Cops4O88544 Gm18291-201ENSMUST00000190791 301 ntBASIC0.52□□□□□ -2.33
Cops4O88544 Gm9227-201ENSMUST00000194733 566 ntBASIC0.52□□□□□ -2.33
Cops4O88544 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC0.52□□□□□ -2.33
Cops4O88544 AC154484.1-201ENSMUST00000227311 771 ntBASIC0.52□□□□□ -2.33
Cops4O88544 Gm24920-201ENSMUST00000083018 85 ntBASIC0.52□□□□□ -2.33
Cops4O88544 Gm14568-201ENSMUST00000119321 294 ntBASIC0.51□□□□□ -2.33
Cops4O88544 Mup-ps22-201ENSMUST00000121611 243 ntBASIC0.51□□□□□ -2.33
Cops4O88544 Gm26358-201ENSMUST00000158215 97 ntBASIC0.51□□□□□ -2.33
Cops4O88544 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC0.51□□□□□ -2.33
Cops4O88544 Mir15a-201ENSMUST00000175266 84 ntBASIC0.51□□□□□ -2.33
Cops4O88544 Mir3070a-201ENSMUST00000175468 89 ntBASIC0.51□□□□□ -2.33
Cops4O88544 Gm26236-201ENSMUST00000175536 137 ntBASIC0.51□□□□□ -2.33
Cops4O88544 Gm16404-201ENSMUST00000177739 468 ntBASIC0.51□□□□□ -2.33
Cops4O88544 Gm7958-201ENSMUST00000178255 468 ntBASIC0.51□□□□□ -2.33
Cops4O88544 Gm7950-201ENSMUST00000179633 468 ntBASIC0.51□□□□□ -2.33
Cops4O88544 Gm14598-201ENSMUST00000180109 468 ntBASIC0.51□□□□□ -2.33
Cops4O88544 Gm14625-201ENSMUST00000180231 468 ntBASIC0.51□□□□□ -2.33
Cops4O88544 Gm25820-201ENSMUST00000198589 127 ntBASIC0.51□□□□□ -2.33
Cops4O88544 AC122905.2-201ENSMUST00000220325 269 ntBASIC0.51□□□□□ -2.33
Cops4O88544 AC160115.1-201ENSMUST00000224678 1574 ntBASIC0.51□□□□□ -2.33
Cops4O88544 AC129208.2-201ENSMUST00000228506 320 ntBASIC0.51□□□□□ -2.33
Cops4O88544 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
Cops4O88544 Gm22302-201ENSMUST00000082657 106 ntBASIC0.51□□□□□ -2.33
Cops4O88544 Gm25627-201ENSMUST00000084003 153 ntBASIC0.51□□□□□ -2.33
Cops4O88544 Gm23203-201ENSMUST00000104374 107 ntBASIC0.5□□□□□ -2.33
Cops4O88544 Gm11856-201ENSMUST00000118712 276 ntBASIC0.5□□□□□ -2.33
Cops4O88544 Gm24678-201ENSMUST00000158756 104 ntBASIC0.5□□□□□ -2.33
Cops4O88544 Gm20391-201ENSMUST00000174722 106 ntBASIC0.5□□□□□ -2.33
Cops4O88544 Gm27365-201ENSMUST00000184041 177 ntBASIC0.5□□□□□ -2.33
Cops4O88544 Gm19777-201ENSMUST00000191940 358 ntBASIC0.5□□□□□ -2.33
Cops4O88544 Sprr2c-ps-201ENSMUST00000195581 301 ntBASIC0.5□□□□□ -2.33
Cops4O88544 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC0.5□□□□□ -2.33
Cops4O88544 Olfr1478-ps1-201ENSMUST00000208393 391 ntBASIC0.5□□□□□ -2.33
Cops4O88544 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC0.49□□□□□ -2.33
Cops4O88544 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC0.49□□□□□ -2.33
Cops4O88544 Gm22656-201ENSMUST00000104199 171 ntBASIC0.49□□□□□ -2.33
Cops4O88544 Gm13720-201ENSMUST00000120741 196 ntBASIC0.49□□□□□ -2.33
Cops4O88544 Gm14846-201ENSMUST00000121868 216 ntBASIC0.49□□□□□ -2.33
Cops4O88544 Gm16265-201ENSMUST00000134558 108 ntBASIC0.49□□□□□ -2.33
Cops4O88544 Gm25909-201ENSMUST00000157619 121 ntBASIC0.49□□□□□ -2.33
Cops4O88544 Gm24853-201ENSMUST00000158026 121 ntBASIC0.49□□□□□ -2.33
Cops4O88544 Gm25643-201ENSMUST00000158874 103 ntBASIC0.49□□□□□ -2.33
Cops4O88544 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC0.49□□□□□ -2.33
Cops4O88544 Gm27755-201ENSMUST00000184623 132 ntBASIC0.49□□□□□ -2.33
Cops4O88544 DQ267101-201ENSMUST00000082562 73 ntBASIC0.49□□□□□ -2.33
Cops4O88544 Gm26135-201ENSMUST00000101993 72 ntBASIC0.48□□□□□ -2.33
Cops4O88544 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC0.48□□□□□ -2.33
Cops4O88544 Gm22482-201ENSMUST00000122563 359 ntBASIC0.48□□□□□ -2.33
Cops4O88544 n-R5s70-201ENSMUST00000122650 116 ntBASIC0.48□□□□□ -2.33
Cops4O88544 Gm24385-201ENSMUST00000122694 350 ntBASIC0.48□□□□□ -2.33
Cops4O88544 Snord50b-201ENSMUST00000178497 72 ntBASIC0.48□□□□□ -2.33
Cops4O88544 Gm28435-201ENSMUST00000185496 108 ntBASIC0.48□□□□□ -2.33
Cops4O88544 Gm28288-201ENSMUST00000191019 214 ntBASIC0.48□□□□□ -2.33
Cops4O88544 1700112D23Rik-202ENSMUST00000193387 299 ntTSL 2 BASIC0.48□□□□□ -2.33
Cops4O88544 Mir468-201ENSMUST00000197332 78 ntBASIC0.48□□□□□ -2.33
Cops4O88544 AC126554.1-201ENSMUST00000222161 271 ntBASIC0.48□□□□□ -2.33
Cops4O88544 Mir19b-2-201ENSMUST00000083539 84 ntBASIC0.48□□□□□ -2.33
Cops4O88544 Mir410-201ENSMUST00000083563 81 ntBASIC0.48□□□□□ -2.33
Cops4O88544 Gm16032-201ENSMUST00000118534 168 ntBASIC0.47□□□□□ -2.33
Cops4O88544 Gm22796-201ENSMUST00000157234 106 ntBASIC0.47□□□□□ -2.33
Cops4O88544 Gm23660-201ENSMUST00000178362 79 ntBASIC0.47□□□□□ -2.33
Cops4O88544 Gm24088-201ENSMUST00000179100 79 ntBASIC0.47□□□□□ -2.33
Cops4O88544 Gm27410-201ENSMUST00000183851 115 ntBASIC0.47□□□□□ -2.33
Cops4O88544 Mir6540-201ENSMUST00000184886 108 ntBASIC0.47□□□□□ -2.33
Cops4O88544 Gm20923-201ENSMUST00000190009 319 ntBASIC0.47□□□□□ -2.33
Retrieved 100 of 76,532 protein–RNA pairs in 85.9 ms