Protein–RNA interactions for Protein: O55142

Rpl35a, 60S ribosomal protein L35a, mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl35aO55142 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
Rpl35aO55142 Gm25538-201ENSMUST00000101943 107 ntBASIC1.87□□□□□ -2.11
Rpl35aO55142 Gm25321-201ENSMUST00000122558 102 ntBASIC1.87□□□□□ -2.11
Rpl35aO55142 Gm24075-201ENSMUST00000158175 72 ntBASIC1.87□□□□□ -2.11
Rpl35aO55142 Gm24922-201ENSMUST00000158511 102 ntBASIC1.87□□□□□ -2.11
Rpl35aO55142 Mir7013-201ENSMUST00000183540 72 ntBASIC1.87□□□□□ -2.11
Rpl35aO55142 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC1.87□□□□□ -2.11
Rpl35aO55142 Gm44322-201ENSMUST00000196830 115 ntBASIC1.87□□□□□ -2.11
Rpl35aO55142 Gm25357-201ENSMUST00000082745 72 ntBASIC1.87□□□□□ -2.11
Rpl35aO55142 Gm10234-201ENSMUST00000089304 60 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
Rpl35aO55142 Gm32014-202ENSMUST00000215328 4168 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
Rpl35aO55142 Olfr681-203ENSMUST00000215517 4324 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
Rpl35aO55142 Gm45257-201ENSMUST00000210301 3998 ntBASIC1.86□□□□□ -2.11
Rpl35aO55142 CT025538.3-201ENSMUST00000225279 3848 ntBASIC1.86□□□□□ -2.11
Rpl35aO55142 Olfr1442-203ENSMUST00000208494 3593 ntAPPRIS P1 TSL 3 BASIC1.86□□□□□ -2.11
Rpl35aO55142 Gm23655-201ENSMUST00000122627 105 ntBASIC1.86□□□□□ -2.11
Rpl35aO55142 Gm22279-201ENSMUST00000157200 93 ntBASIC1.86□□□□□ -2.11
Rpl35aO55142 Gm23390-201ENSMUST00000157393 106 ntBASIC1.86□□□□□ -2.11
Rpl35aO55142 Gm37997-201ENSMUST00000193515 267 ntBASIC1.86□□□□□ -2.11
Rpl35aO55142 Mir721-201ENSMUST00000200230 88 ntBASIC1.86□□□□□ -2.11
Rpl35aO55142 Gm44052-201ENSMUST00000203382 396 ntBASIC1.86□□□□□ -2.11
Rpl35aO55142 AC120555.1-201ENSMUST00000221020 222 ntTSL 5 BASIC1.86□□□□□ -2.11
Rpl35aO55142 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
Rpl35aO55142 Olfr821-203ENSMUST00000214177 1929 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Rpl35aO55142 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Rpl35aO55142 Gm26154-201ENSMUST00000102339 96 ntBASIC1.85□□□□□ -2.11
Rpl35aO55142 Gm23043-201ENSMUST00000157890 109 ntBASIC1.85□□□□□ -2.11
Rpl35aO55142 Gm24771-201ENSMUST00000158508 137 ntBASIC1.85□□□□□ -2.11
Rpl35aO55142 Mir3092-201ENSMUST00000174954 96 ntBASIC1.85□□□□□ -2.11
Rpl35aO55142 Gm37557-201ENSMUST00000191640 139 ntBASIC1.85□□□□□ -2.11
Rpl35aO55142 Gm44966-201ENSMUST00000208096 157 ntBASIC1.85□□□□□ -2.11
Rpl35aO55142 Gm21876-201ENSMUST00000096511 282 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Rpl35aO55142 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
Rpl35aO55142 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
Rpl35aO55142 Olfr1225-202ENSMUST00000216961 3231 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
Rpl35aO55142 Gm26339-201ENSMUST00000102368 99 ntBASIC1.84□□□□□ -2.11
Rpl35aO55142 Gm26293-201ENSMUST00000104170 84 ntBASIC1.84□□□□□ -2.11
Rpl35aO55142 Gm13756-201ENSMUST00000117618 222 ntBASIC1.84□□□□□ -2.11
Rpl35aO55142 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC1.84□□□□□ -2.11
Rpl35aO55142 Gm22554-201ENSMUST00000157798 147 ntBASIC1.84□□□□□ -2.11
Rpl35aO55142 Gm22989-201ENSMUST00000158313 86 ntBASIC1.84□□□□□ -2.11
Rpl35aO55142 Gm22768-201ENSMUST00000158366 153 ntBASIC1.84□□□□□ -2.11
Rpl35aO55142 Gm25267-201ENSMUST00000158522 63 ntBASIC1.84□□□□□ -2.11
Rpl35aO55142 Mir1927-201ENSMUST00000158579 109 ntBASIC1.84□□□□□ -2.11
Rpl35aO55142 Gm24816-201ENSMUST00000175311 151 ntBASIC1.84□□□□□ -2.11
Rpl35aO55142 Mir6388-201ENSMUST00000184417 75 ntBASIC1.84□□□□□ -2.11
Rpl35aO55142 Gm21064-202ENSMUST00000190583 278 ntBASIC1.84□□□□□ -2.11
Rpl35aO55142 Ighv1-1-201ENSMUST00000194912 291 ntBASIC1.84□□□□□ -2.11
Rpl35aO55142 AC154994.1-201ENSMUST00000217395 302 ntBASIC1.84□□□□□ -2.11
Rpl35aO55142 Gm25813-201ENSMUST00000082748 191 ntBASIC1.84□□□□□ -2.11
Rpl35aO55142 Gm24929-201ENSMUST00000083403 139 ntBASIC1.84□□□□□ -2.11
Rpl35aO55142 Gm3081-201ENSMUST00000193413 3025 ntBASIC1.84□□□□□ -2.12
Rpl35aO55142 Gm7145-201ENSMUST00000185381 1794 ntAPPRIS P1 TSL 3 BASIC1.83□□□□□ -2.12
Rpl35aO55142 Gm14536-201ENSMUST00000118324 138 ntBASIC1.83□□□□□ -2.12
Rpl35aO55142 Gm15027-201ENSMUST00000120922 138 ntBASIC1.83□□□□□ -2.12
Rpl35aO55142 Gm24851-201ENSMUST00000158028 103 ntBASIC1.83□□□□□ -2.12
Rpl35aO55142 Gm25866-201ENSMUST00000158245 112 ntBASIC1.83□□□□□ -2.12
Rpl35aO55142 Gm25368-201ENSMUST00000158847 131 ntBASIC1.83□□□□□ -2.12
Rpl35aO55142 Gm20477-201ENSMUST00000174028 280 ntBASIC1.83□□□□□ -2.12
Rpl35aO55142 Gm19257-201ENSMUST00000186121 183 ntBASIC1.83□□□□□ -2.12
Rpl35aO55142 AC134601.3-201ENSMUST00000221682 154 ntBASIC1.83□□□□□ -2.12
Rpl35aO55142 AC129202.1-201ENSMUST00000224895 526 ntBASIC1.83□□□□□ -2.12
Rpl35aO55142 AC115291.1-201ENSMUST00000226803 258 ntBASIC1.83□□□□□ -2.12
Rpl35aO55142 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Rpl35aO55142 n-R5s200-201ENSMUST00000104194 113 ntBASIC1.82□□□□□ -2.12
Rpl35aO55142 Gm26015-201ENSMUST00000104402 125 ntBASIC1.82□□□□□ -2.12
Rpl35aO55142 Gm25985-201ENSMUST00000122677 107 ntBASIC1.82□□□□□ -2.12
Rpl35aO55142 Gm12801-201ENSMUST00000153228 263 ntTSL 3 BASIC1.82□□□□□ -2.12
Rpl35aO55142 Gm24668-201ENSMUST00000158935 104 ntBASIC1.82□□□□□ -2.12
Rpl35aO55142 Gm17036-201ENSMUST00000168187 254 ntTSL 3 BASIC1.82□□□□□ -2.12
Rpl35aO55142 Hmga1b-202ENSMUST00000178955 120 ntBASIC1.82□□□□□ -2.12
Rpl35aO55142 Gm23963-201ENSMUST00000179603 77 ntBASIC1.82□□□□□ -2.12
Rpl35aO55142 Gm44326-201ENSMUST00000198226 101 ntBASIC1.82□□□□□ -2.12
Rpl35aO55142 Gm23370-201ENSMUST00000199545 130 ntBASIC1.82□□□□□ -2.12
Rpl35aO55142 N4bp2os-201ENSMUST00000201547 235 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
Rpl35aO55142 Gm44578-201ENSMUST00000207236 3835 ntBASIC1.82□□□□□ -2.12
Rpl35aO55142 Gm24412-201ENSMUST00000083426 109 ntBASIC1.82□□□□□ -2.12
Rpl35aO55142 AC160984.1-201ENSMUST00000225855 3154 ntBASIC1.82□□□□□ -2.12
Rpl35aO55142 Olfr868-202ENSMUST00000212999 4233 ntAPPRIS P1 TSL 3 BASIC1.82□□□□□ -2.12
Rpl35aO55142 AC159625.1-201ENSMUST00000220994 2625 ntBASIC1.81□□□□□ -2.12
Rpl35aO55142 Mir297a-2-201ENSMUST00000103795 90 ntBASIC1.81□□□□□ -2.12
Rpl35aO55142 Gm22674-201ENSMUST00000104413 131 ntBASIC1.81□□□□□ -2.12
Rpl35aO55142 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
Rpl35aO55142 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC1.81□□□□□ -2.12
Rpl35aO55142 Gm28900-201ENSMUST00000185232 156 ntBASIC1.81□□□□□ -2.12
Rpl35aO55142 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC1.81□□□□□ -2.12
Rpl35aO55142 Snord43-201ENSMUST00000199549 108 ntBASIC1.81□□□□□ -2.12
Rpl35aO55142 Gm24044-201ENSMUST00000083107 156 ntBASIC1.81□□□□□ -2.12
Rpl35aO55142 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC1.81□□□□□ -2.12
Rpl35aO55142 Gm42445-201ENSMUST00000196996 2893 ntBASIC1.8□□□□□ -2.12
Rpl35aO55142 Olfr851-202ENSMUST00000214130 7123 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
Rpl35aO55142 Gm14914-201ENSMUST00000117576 2031 ntBASIC1.8□□□□□ -2.12
Rpl35aO55142 Gm24276-201ENSMUST00000102181 110 ntBASIC1.8□□□□□ -2.12
Rpl35aO55142 Gm23600-201ENSMUST00000157260 71 ntBASIC1.8□□□□□ -2.12
Rpl35aO55142 Gm23718-201ENSMUST00000157350 307 ntBASIC1.8□□□□□ -2.12
Rpl35aO55142 Gm25884-201ENSMUST00000157782 62 ntBASIC1.8□□□□□ -2.12
Rpl35aO55142 Gm22517-201ENSMUST00000158265 136 ntBASIC1.8□□□□□ -2.12
Rpl35aO55142 Gm23005-201ENSMUST00000158950 136 ntBASIC1.8□□□□□ -2.12
Rpl35aO55142 Gm25464-201ENSMUST00000175481 107 ntBASIC1.8□□□□□ -2.12
Rpl35aO55142 Gm27928-201ENSMUST00000183747 256 ntBASIC1.8□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 86.5 ms