Protein–RNA interactions for Protein: O35988

Sdc4, Syndecan-4, mousemouse

Known RBP Predictions only

Length 198 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc4O35988 AC113441.1-201ENSMUST00000223464 134 ntBASIC0.24□□□□□ -2.37
Sdc4O35988 AC192333.2-201ENSMUST00000224771 196 ntBASIC0.24□□□□□ -2.37
Sdc4O35988 Gm15102-201ENSMUST00000118740 1502 ntBASIC0.23□□□□□ -2.37
Sdc4O35988 Gm15101-201ENSMUST00000178818 1502 ntBASIC0.23□□□□□ -2.37
Sdc4O35988 Gm11254-201ENSMUST00000122368 653 ntBASIC0.23□□□□□ -2.37
Sdc4O35988 n-R5s18-201ENSMUST00000122740 121 ntBASIC0.23□□□□□ -2.37
Sdc4O35988 Gm24476-201ENSMUST00000157437 131 ntBASIC0.23□□□□□ -2.37
Sdc4O35988 Gm27365-201ENSMUST00000184041 177 ntBASIC0.23□□□□□ -2.37
Sdc4O35988 Gm20923-201ENSMUST00000190009 319 ntBASIC0.23□□□□□ -2.37
Sdc4O35988 Gm21088-201ENSMUST00000190875 316 ntBASIC0.23□□□□□ -2.37
Sdc4O35988 Gm44488-201ENSMUST00000199467 119 ntBASIC0.23□□□□□ -2.37
Sdc4O35988 Gm35558-203ENSMUST00000222264 204 ntBASIC0.23□□□□□ -2.37
Sdc4O35988 AC104832.1-201ENSMUST00000222938 550 ntBASIC0.23□□□□□ -2.37
Sdc4O35988 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC0.23□□□□□ -2.37
Sdc4O35988 Snord68-201ENSMUST00000082516 86 ntBASIC0.23□□□□□ -2.37
Sdc4O35988 Gm25697-201ENSMUST00000082902 98 ntBASIC0.23□□□□□ -2.37
Sdc4O35988 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC0.23□□□□□ -2.37
Sdc4O35988 Gm22786-201ENSMUST00000104086 122 ntBASIC0.22□□□□□ -2.37
Sdc4O35988 Gm12255-201ENSMUST00000117184 284 ntBASIC0.22□□□□□ -2.37
Sdc4O35988 Gm11856-201ENSMUST00000118712 276 ntBASIC0.22□□□□□ -2.37
Sdc4O35988 Gm14568-201ENSMUST00000119321 294 ntBASIC0.22□□□□□ -2.37
Sdc4O35988 Gm12068-201ENSMUST00000153153 376 ntTSL 3 BASIC0.22□□□□□ -2.37
Sdc4O35988 Gm23996-201ENSMUST00000158062 131 ntBASIC0.22□□□□□ -2.37
Sdc4O35988 Gm18417-201ENSMUST00000176564 648 ntBASIC0.22□□□□□ -2.37
Sdc4O35988 Gm23145-201ENSMUST00000178912 79 ntBASIC0.22□□□□□ -2.37
Sdc4O35988 Gm25284-201ENSMUST00000180345 141 ntBASIC0.22□□□□□ -2.37
Sdc4O35988 Gm43140-201ENSMUST00000197317 456 ntTSL 2 BASIC0.22□□□□□ -2.37
Sdc4O35988 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC0.22□□□□□ -2.37
Sdc4O35988 AC157476.1-201ENSMUST00000215555 169 ntBASIC0.22□□□□□ -2.37
Sdc4O35988 AC121844.1-201ENSMUST00000218706 137 ntBASIC0.22□□□□□ -2.37
Sdc4O35988 AC173345.2-201ENSMUST00000222795 153 ntBASIC0.22□□□□□ -2.37
Sdc4O35988 AC183092.1-201ENSMUST00000224301 153 ntBASIC0.22□□□□□ -2.37
Sdc4O35988 Gm22809-201ENSMUST00000082743 156 ntBASIC0.22□□□□□ -2.37
Sdc4O35988 Gm22743-201ENSMUST00000083445 133 ntBASIC0.22□□□□□ -2.37
Sdc4O35988 Gm45557-201ENSMUST00000210004 1651 ntBASIC0.21□□□□□ -2.38
Sdc4O35988 Olfr872-201ENSMUST00000086474 1897 ntAPPRIS P1 TSL 2 BASIC0.21□□□□□ -2.38
Sdc4O35988 Gm10972-201ENSMUST00000107276 81 ntAPPRIS P1 TSL 5 BASIC0.21□□□□□ -2.38
Sdc4O35988 Gm23898-201ENSMUST00000158111 103 ntBASIC0.21□□□□□ -2.38
Sdc4O35988 Gm24005-201ENSMUST00000158459 296 ntBASIC0.21□□□□□ -2.38
Sdc4O35988 Gm25718-201ENSMUST00000158632 118 ntBASIC0.21□□□□□ -2.38
Sdc4O35988 Ranbp2-ps4-201ENSMUST00000183481 385 ntBASIC0.21□□□□□ -2.38
Sdc4O35988 Mir6389-201ENSMUST00000183661 102 ntBASIC0.21□□□□□ -2.38
Sdc4O35988 Gm27717-201ENSMUST00000183933 151 ntBASIC0.21□□□□□ -2.38
Sdc4O35988 Gm36953-201ENSMUST00000195295 268 ntBASIC0.21□□□□□ -2.38
Sdc4O35988 AC100209.2-201ENSMUST00000224461 451 ntBASIC0.21□□□□□ -2.38
Sdc4O35988 AC154747.1-201ENSMUST00000225265 239 ntBASIC0.21□□□□□ -2.38
Sdc4O35988 Gm26326-201ENSMUST00000083070 129 ntBASIC0.21□□□□□ -2.38
Sdc4O35988 Mir196a-2-201ENSMUST00000083554 85 ntBASIC0.21□□□□□ -2.38
Sdc4O35988 Gm44560-201ENSMUST00000207816 3115 ntBASIC0.21□□□□□ -2.38
Sdc4O35988 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC0.2□□□□□ -2.38
Sdc4O35988 Mir582-201ENSMUST00000103758 81 ntBASIC0.2□□□□□ -2.38
Sdc4O35988 Gm12837-201ENSMUST00000120131 373 ntBASIC0.2□□□□□ -2.38
Sdc4O35988 Gm14782-201ENSMUST00000120151 195 ntBASIC0.2□□□□□ -2.38
Sdc4O35988 Gm14269-201ENSMUST00000120455 306 ntBASIC0.2□□□□□ -2.38
Sdc4O35988 Gm23169-201ENSMUST00000157157 112 ntBASIC0.2□□□□□ -2.38
Sdc4O35988 Gm25393-201ENSMUST00000157336 285 ntBASIC0.2□□□□□ -2.38
Sdc4O35988 Gm23557-201ENSMUST00000157820 138 ntBASIC0.2□□□□□ -2.38
Sdc4O35988 Gm24963-201ENSMUST00000157916 144 ntBASIC0.2□□□□□ -2.38
Sdc4O35988 Gm25247-201ENSMUST00000175475 90 ntBASIC0.2□□□□□ -2.38
Sdc4O35988 Gm18588-201ENSMUST00000177308 492 ntBASIC0.2□□□□□ -2.38
Sdc4O35988 Gm17067-202ENSMUST00000180131 123 ntBASIC0.2□□□□□ -2.38
Sdc4O35988 Gm27980-201ENSMUST00000184094 169 ntBASIC0.2□□□□□ -2.38
Sdc4O35988 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC0.2□□□□□ -2.38
Sdc4O35988 AC120394.1-201ENSMUST00000217153 351 ntBASIC0.2□□□□□ -2.38
Sdc4O35988 Gm23055-201ENSMUST00000082805 94 ntBASIC0.2□□□□□ -2.38
Sdc4O35988 Snord38a-201ENSMUST00000083746 71 ntBASIC0.2□□□□□ -2.38
Sdc4O35988 Gm24523-201ENSMUST00000083965 132 ntBASIC0.2□□□□□ -2.38
Sdc4O35988 Gm24163-201ENSMUST00000093660 132 ntBASIC0.2□□□□□ -2.38
Sdc4O35988 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC0.19□□□□□ -2.38
Sdc4O35988 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC0.19□□□□□ -2.38
Sdc4O35988 Gm17148-201ENSMUST00000164702 249 ntBASIC0.19□□□□□ -2.38
Sdc4O35988 Gm24085-201ENSMUST00000175172 116 ntBASIC0.19□□□□□ -2.38
Sdc4O35988 Mir3079-201ENSMUST00000175428 90 ntBASIC0.19□□□□□ -2.38
Sdc4O35988 Gm24618-201ENSMUST00000177718 94 ntBASIC0.19□□□□□ -2.38
Sdc4O35988 Gm23953-201ENSMUST00000178214 94 ntBASIC0.19□□□□□ -2.38
Sdc4O35988 Gm26332-201ENSMUST00000179813 94 ntBASIC0.19□□□□□ -2.38
Sdc4O35988 Gm22863-201ENSMUST00000180265 94 ntBASIC0.19□□□□□ -2.38
Sdc4O35988 Gm42988-201ENSMUST00000198116 225 ntBASIC0.19□□□□□ -2.38
Sdc4O35988 Olfr375-ps1-201ENSMUST00000198131 249 ntBASIC0.19□□□□□ -2.38
Sdc4O35988 Gm30155-201ENSMUST00000223458 339 ntBASIC0.19□□□□□ -2.38
Sdc4O35988 Gm25801-201ENSMUST00000082638 106 ntBASIC0.19□□□□□ -2.38
Sdc4O35988 Gm25789-201ENSMUST00000083294 76 ntBASIC0.19□□□□□ -2.38
Sdc4O35988 Gm26066-201ENSMUST00000083385 109 ntBASIC0.19□□□□□ -2.38
Sdc4O35988 Gm14946-201ENSMUST00000119859 296 ntBASIC0.18□□□□□ -2.38
Sdc4O35988 Mup-ps22-201ENSMUST00000121611 243 ntBASIC0.18□□□□□ -2.38
Sdc4O35988 Gm15632-201ENSMUST00000135936 246 ntTSL 1 (best) BASIC0.18□□□□□ -2.38
Sdc4O35988 Gm22818-201ENSMUST00000157446 104 ntBASIC0.18□□□□□ -2.38
Sdc4O35988 Gm22340-201ENSMUST00000157717 114 ntBASIC0.18□□□□□ -2.38
Sdc4O35988 Gm24409-201ENSMUST00000157881 152 ntBASIC0.18□□□□□ -2.38
Sdc4O35988 Gm24962-201ENSMUST00000157917 109 ntBASIC0.18□□□□□ -2.38
Sdc4O35988 Mir1961-201ENSMUST00000158643 112 ntBASIC0.18□□□□□ -2.38
Sdc4O35988 Eif3s6-ps2-201ENSMUST00000163304 219 ntBASIC0.18□□□□□ -2.38
Sdc4O35988 Gm26200-201ENSMUST00000180273 79 ntBASIC0.18□□□□□ -2.38
Sdc4O35988 Gm27313-201ENSMUST00000183500 142 ntBASIC0.18□□□□□ -2.38
Sdc4O35988 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC0.18□□□□□ -2.38
Sdc4O35988 Gm28438-201ENSMUST00000188299 345 ntBASIC0.18□□□□□ -2.38
Sdc4O35988 Mir6896-201ENSMUST00000198033 73 ntBASIC0.18□□□□□ -2.38
Sdc4O35988 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC0.18□□□□□ -2.38
Sdc4O35988 mt-Nd3-201ENSMUST00000082411 348 ntAPPRIS P1 BASIC0.18□□□□□ -2.38
Sdc4O35988 Mir654-201ENSMUST00000104787 84 ntBASIC0.17□□□□□ -2.38
Retrieved 100 of 76,532 protein–RNA pairs in 76.7 ms