Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Gm25079-201ENSMUST00000082529 203 ntBASIC1.45□□□□□ -2.18
Srp54bE9PXC0 Mir155-201ENSMUST00000083463 65 ntBASIC1.45□□□□□ -2.18
Srp54bE9PXC0 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
Srp54bE9PXC0 Mir653-201ENSMUST00000102402 85 ntBASIC1.44□□□□□ -2.18
Srp54bE9PXC0 Gm13967-201ENSMUST00000120404 380 ntBASIC1.44□□□□□ -2.18
Srp54bE9PXC0 Gm14491-201ENSMUST00000121919 199 ntBASIC1.44□□□□□ -2.18
Srp54bE9PXC0 Gm24629-201ENSMUST00000122762 89 ntBASIC1.44□□□□□ -2.18
Srp54bE9PXC0 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC1.44□□□□□ -2.18
Srp54bE9PXC0 Gm22279-201ENSMUST00000157200 93 ntBASIC1.44□□□□□ -2.18
Srp54bE9PXC0 Gm26049-201ENSMUST00000157313 108 ntBASIC1.44□□□□□ -2.18
Srp54bE9PXC0 Gm22814-201ENSMUST00000157452 104 ntBASIC1.44□□□□□ -2.18
Srp54bE9PXC0 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.44□□□□□ -2.18
Srp54bE9PXC0 Gm28881-201ENSMUST00000187710 470 ntTSL 3 BASIC1.44□□□□□ -2.18
Srp54bE9PXC0 Gm29665-201ENSMUST00000191457 528 ntBASIC1.44□□□□□ -2.18
Srp54bE9PXC0 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC1.44□□□□□ -2.18
Srp54bE9PXC0 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC1.44□□□□□ -2.18
Srp54bE9PXC0 Gm37801-201ENSMUST00000194754 274 ntBASIC1.44□□□□□ -2.18
Srp54bE9PXC0 Gm37089-201ENSMUST00000195616 129 ntBASIC1.44□□□□□ -2.18
Srp54bE9PXC0 Mir465d-201ENSMUST00000196314 58 ntBASIC1.44□□□□□ -2.18
Srp54bE9PXC0 AC098718.2-201ENSMUST00000226822 285 ntBASIC1.44□□□□□ -2.18
Srp54bE9PXC0 Gm10092-201ENSMUST00000077110 180 ntBASIC1.44□□□□□ -2.18
Srp54bE9PXC0 Snord14a-201ENSMUST00000082807 87 ntBASIC1.44□□□□□ -2.18
Srp54bE9PXC0 Gm24164-201ENSMUST00000093663 104 ntBASIC1.44□□□□□ -2.18
Srp54bE9PXC0 Gm24283-201ENSMUST00000104233 107 ntBASIC1.43□□□□□ -2.18
Srp54bE9PXC0 Gm23336-201ENSMUST00000117023 123 ntBASIC1.43□□□□□ -2.18
Srp54bE9PXC0 Gm14761-201ENSMUST00000121363 262 ntBASIC1.43□□□□□ -2.18
Srp54bE9PXC0 4930598A11Rik-201ENSMUST00000180742 628 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
Srp54bE9PXC0 Mir7665-201ENSMUST00000184907 63 ntBASIC1.43□□□□□ -2.18
Srp54bE9PXC0 Gm28849-201ENSMUST00000188127 174 ntBASIC1.43□□□□□ -2.18
Srp54bE9PXC0 Gm28330-201ENSMUST00000190353 171 ntBASIC1.43□□□□□ -2.18
Srp54bE9PXC0 Olfr1064-ps1-201ENSMUST00000213670 600 ntBASIC1.43□□□□□ -2.18
Srp54bE9PXC0 Gm46993-201ENSMUST00000220708 259 ntBASIC1.43□□□□□ -2.18
Srp54bE9PXC0 Gm23845-201ENSMUST00000083834 152 ntBASIC1.43□□□□□ -2.18
Srp54bE9PXC0 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
Srp54bE9PXC0 Gm44240-201ENSMUST00000204015 2654 ntBASIC1.42□□□□□ -2.18
Srp54bE9PXC0 Gm25068-201ENSMUST00000103895 110 ntBASIC1.42□□□□□ -2.18
Srp54bE9PXC0 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC1.42□□□□□ -2.18
Srp54bE9PXC0 Gm27997-201ENSMUST00000184942 69 ntBASIC1.42□□□□□ -2.18
Srp54bE9PXC0 Gm44962-201ENSMUST00000206460 279 ntBASIC1.42□□□□□ -2.18
Srp54bE9PXC0 Gm29818-201ENSMUST00000218070 165 ntBASIC1.42□□□□□ -2.18
Srp54bE9PXC0 AC154636.2-201ENSMUST00000222538 161 ntBASIC1.42□□□□□ -2.18
Srp54bE9PXC0 Gm25930-201ENSMUST00000082785 107 ntBASIC1.42□□□□□ -2.18
Srp54bE9PXC0 Gm24038-201ENSMUST00000082872 159 ntBASIC1.42□□□□□ -2.18
Srp54bE9PXC0 Gm26107-201ENSMUST00000083972 107 ntBASIC1.42□□□□□ -2.18
Srp54bE9PXC0 Olfr8-203ENSMUST00000214952 3407 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
Srp54bE9PXC0 Gm22883-201ENSMUST00000157376 106 ntBASIC1.41□□□□□ -2.18
Srp54bE9PXC0 Snord13-201ENSMUST00000157627 104 ntBASIC1.41□□□□□ -2.18
Srp54bE9PXC0 Gm24847-201ENSMUST00000158032 108 ntBASIC1.41□□□□□ -2.18
Srp54bE9PXC0 Gm17919-201ENSMUST00000173344 312 ntBASIC1.41□□□□□ -2.18
Srp54bE9PXC0 Gm22862-201ENSMUST00000178593 121 ntBASIC1.41□□□□□ -2.18
Srp54bE9PXC0 Gm42719-201ENSMUST00000197393 355 ntBASIC1.41□□□□□ -2.18
Srp54bE9PXC0 Gm44468-201ENSMUST00000199516 105 ntBASIC1.41□□□□□ -2.18
Srp54bE9PXC0 Gm43911-201ENSMUST00000203097 76 ntBASIC1.41□□□□□ -2.18
Srp54bE9PXC0 Vmn1r-ps13-201ENSMUST00000204697 134 ntBASIC1.41□□□□□ -2.18
Srp54bE9PXC0 AC173482.5-201ENSMUST00000224181 327 ntBASIC1.41□□□□□ -2.18
Srp54bE9PXC0 mt-Nd4-201ENSMUST00000082414 1378 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
Srp54bE9PXC0 Gm14917-201ENSMUST00000118872 2105 ntBASIC1.4□□□□□ -2.18
Srp54bE9PXC0 Gm23492-201ENSMUST00000116837 115 ntBASIC1.4□□□□□ -2.19
Srp54bE9PXC0 Gm11794-201ENSMUST00000119446 237 ntBASIC1.4□□□□□ -2.19
Srp54bE9PXC0 Gm22963-201ENSMUST00000157960 91 ntBASIC1.4□□□□□ -2.19
Srp54bE9PXC0 Gm24501-201ENSMUST00000158452 62 ntBASIC1.4□□□□□ -2.19
Srp54bE9PXC0 Mir5624-201ENSMUST00000176635 61 ntBASIC1.4□□□□□ -2.19
Srp54bE9PXC0 Gm27640-201ENSMUST00000184580 147 ntBASIC1.4□□□□□ -2.19
Srp54bE9PXC0 Rpl23a-ps7-201ENSMUST00000185437 460 ntBASIC1.4□□□□□ -2.19
Srp54bE9PXC0 Gm28409-201ENSMUST00000187064 103 ntBASIC1.4□□□□□ -2.19
Srp54bE9PXC0 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.4□□□□□ -2.19
Srp54bE9PXC0 AC139186.1-201ENSMUST00000197610 94 ntBASIC1.4□□□□□ -2.19
Srp54bE9PXC0 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC1.4□□□□□ -2.19
Srp54bE9PXC0 Gm28016-201ENSMUST00000184594 196 ntBASIC1.39□□□□□ -2.19
Srp54bE9PXC0 Gm44483-201ENSMUST00000197203 97 ntBASIC1.39□□□□□ -2.19
Srp54bE9PXC0 Mir6962-201ENSMUST00000199512 63 ntBASIC1.39□□□□□ -2.19
Srp54bE9PXC0 Gm45116-201ENSMUST00000207392 275 ntBASIC1.39□□□□□ -2.19
Srp54bE9PXC0 AL603630.1-201ENSMUST00000214781 147 ntBASIC1.39□□□□□ -2.19
Srp54bE9PXC0 Gm16976-205ENSMUST00000227324 226 ntBASIC1.39□□□□□ -2.19
Srp54bE9PXC0 Gm24261-201ENSMUST00000083744 104 ntBASIC1.39□□□□□ -2.19
Srp54bE9PXC0 Gm8935-202ENSMUST00000105727 1959 ntBASIC1.38□□□□□ -2.19
Srp54bE9PXC0 Gm15379-201ENSMUST00000121224 648 ntBASIC1.38□□□□□ -2.19
Srp54bE9PXC0 Gm15214-201ENSMUST00000122155 470 ntBASIC1.38□□□□□ -2.19
Srp54bE9PXC0 Mir3098-201ENSMUST00000175416 87 ntBASIC1.38□□□□□ -2.19
Srp54bE9PXC0 Gm42774-201ENSMUST00000198854 283 ntBASIC1.38□□□□□ -2.19
Srp54bE9PXC0 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC1.38□□□□□ -2.19
Srp54bE9PXC0 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
Srp54bE9PXC0 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
Srp54bE9PXC0 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC1.37□□□□□ -2.19
Srp54bE9PXC0 Gm15002-201ENSMUST00000118406 452 ntBASIC1.37□□□□□ -2.19
Srp54bE9PXC0 Gm25318-201ENSMUST00000122554 314 ntBASIC1.37□□□□□ -2.19
Srp54bE9PXC0 Gm22559-201ENSMUST00000157329 134 ntBASIC1.37□□□□□ -2.19
Srp54bE9PXC0 mt-Tr-201ENSMUST00000082412 68 ntBASIC1.37□□□□□ -2.19
Srp54bE9PXC0 Gm25038-201ENSMUST00000082928 130 ntBASIC1.37□□□□□ -2.19
Srp54bE9PXC0 Gm18795-202ENSMUST00000223373 2920 ntBASIC1.37□□□□□ -2.19
Srp54bE9PXC0 AC164629.4-201ENSMUST00000218505 3247 ntBASIC1.36□□□□□ -2.19
Srp54bE9PXC0 Gm25759-201ENSMUST00000103988 129 ntBASIC1.36□□□□□ -2.19
Srp54bE9PXC0 Gm44177-201ENSMUST00000204338 2667 ntBASIC1.35□□□□□ -2.19
Srp54bE9PXC0 Gm12080-201ENSMUST00000119821 1883 ntBASIC1.35□□□□□ -2.19
Srp54bE9PXC0 Mir343-201ENSMUST00000102360 75 ntBASIC1.35□□□□□ -2.19
Srp54bE9PXC0 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
Srp54bE9PXC0 Mir544-201ENSMUST00000103813 78 ntBASIC1.35□□□□□ -2.19
Srp54bE9PXC0 Gm13339-201ENSMUST00000120651 510 ntBASIC1.35□□□□□ -2.19
Srp54bE9PXC0 Mup-ps22-201ENSMUST00000121611 243 ntBASIC1.35□□□□□ -2.19
Srp54bE9PXC0 Gm13725-201ENSMUST00000122139 207 ntBASIC1.35□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 100.3 ms