Protein–RNA interactions for Protein: A0A0B4J1K2

Trav9-4, T cell receptor alpha variable 9-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-4A0A0B4J1K2 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC-0.14□□□□□ -2.43
Trav9-4A0A0B4J1K2 Mir8107-201ENSMUST00000184024 117 ntBASIC-0.14□□□□□ -2.43
Trav9-4A0A0B4J1K2 Gm28196-201ENSMUST00000187719 640 ntBASIC-0.14□□□□□ -2.43
Trav9-4A0A0B4J1K2 Gm28256-201ENSMUST00000188953 139 ntBASIC-0.14□□□□□ -2.43
Trav9-4A0A0B4J1K2 Gm28559-201ENSMUST00000190532 139 ntBASIC-0.14□□□□□ -2.43
Trav9-4A0A0B4J1K2 Gm44457-201ENSMUST00000198109 76 ntBASIC-0.14□□□□□ -2.43
Trav9-4A0A0B4J1K2 Gm42988-201ENSMUST00000198116 225 ntBASIC-0.14□□□□□ -2.43
Trav9-4A0A0B4J1K2 Gm44055-201ENSMUST00000204376 247 ntBASIC-0.14□□□□□ -2.43
Trav9-4A0A0B4J1K2 AC154506.3-201ENSMUST00000225417 213 ntBASIC-0.14□□□□□ -2.43
Trav9-4A0A0B4J1K2 Gm24616-201ENSMUST00000083274 139 ntBASIC-0.14□□□□□ -2.43
Trav9-4A0A0B4J1K2 Gm23531-201ENSMUST00000104567 68 ntBASIC-0.15□□□□□ -2.43
Trav9-4A0A0B4J1K2 Gm15289-201ENSMUST00000117793 244 ntBASIC-0.15□□□□□ -2.43
Trav9-4A0A0B4J1K2 Gm23898-201ENSMUST00000158111 103 ntBASIC-0.15□□□□□ -2.43
Trav9-4A0A0B4J1K2 Gm24500-201ENSMUST00000158447 124 ntBASIC-0.15□□□□□ -2.43
Trav9-4A0A0B4J1K2 Obox4-ps34-201ENSMUST00000175879 520 ntBASIC-0.15□□□□□ -2.43
Trav9-4A0A0B4J1K2 Gm28992-201ENSMUST00000190534 139 ntBASIC-0.15□□□□□ -2.43
Trav9-4A0A0B4J1K2 Gm44455-201ENSMUST00000200061 82 ntBASIC-0.15□□□□□ -2.43
Trav9-4A0A0B4J1K2 Gm44010-201ENSMUST00000204432 331 ntBASIC-0.15□□□□□ -2.43
Trav9-4A0A0B4J1K2 Gm18242-201ENSMUST00000218455 542 ntBASIC-0.15□□□□□ -2.43
Trav9-4A0A0B4J1K2 AC153141.1-201ENSMUST00000218636 501 ntBASIC-0.15□□□□□ -2.43
Trav9-4A0A0B4J1K2 Gm10801-201ENSMUST00000099684 504 ntAPPRIS P1 TSL 5 BASIC-0.15□□□□□ -2.43
Trav9-4A0A0B4J1K2 Gm22543-201ENSMUST00000104347 94 ntBASIC-0.16□□□□□ -2.44
Trav9-4A0A0B4J1K2 Gm25309-201ENSMUST00000116728 126 ntBASIC-0.16□□□□□ -2.44
Trav9-4A0A0B4J1K2 Gm16032-201ENSMUST00000118534 168 ntBASIC-0.16□□□□□ -2.44
Trav9-4A0A0B4J1K2 Gm11254-201ENSMUST00000122368 653 ntBASIC-0.16□□□□□ -2.44
Trav9-4A0A0B4J1K2 n-R5s6-201ENSMUST00000122663 88 ntBASIC-0.16□□□□□ -2.44
Trav9-4A0A0B4J1K2 Gm26274-201ENSMUST00000157103 321 ntBASIC-0.16□□□□□ -2.44
Trav9-4A0A0B4J1K2 Gm25375-201ENSMUST00000158157 135 ntBASIC-0.16□□□□□ -2.44
Trav9-4A0A0B4J1K2 Gm22200-201ENSMUST00000158614 67 ntBASIC-0.16□□□□□ -2.44
Trav9-4A0A0B4J1K2 Gm17148-201ENSMUST00000164702 249 ntBASIC-0.16□□□□□ -2.44
Trav9-4A0A0B4J1K2 Mir195b-201ENSMUST00000184814 97 ntBASIC-0.16□□□□□ -2.44
Trav9-4A0A0B4J1K2 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC-0.16□□□□□ -2.44
Trav9-4A0A0B4J1K2 Gm6003-201ENSMUST00000187903 463 ntBASIC-0.16□□□□□ -2.44
Trav9-4A0A0B4J1K2 Gm29640-201ENSMUST00000187972 278 ntBASIC-0.16□□□□□ -2.44
Trav9-4A0A0B4J1K2 Gm44490-201ENSMUST00000198566 127 ntBASIC-0.16□□□□□ -2.44
Trav9-4A0A0B4J1K2 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC-0.16□□□□□ -2.44
Trav9-4A0A0B4J1K2 Gm44960-201ENSMUST00000207403 141 ntBASIC-0.16□□□□□ -2.44
Trav9-4A0A0B4J1K2 AC116589.7-201ENSMUST00000221061 239 ntBASIC-0.16□□□□□ -2.44
Trav9-4A0A0B4J1K2 AC164117.1-201ENSMUST00000221726 239 ntBASIC-0.16□□□□□ -2.44
Trav9-4A0A0B4J1K2 Olfr1102-201ENSMUST00000055129 1063 ntAPPRIS P1 BASIC-0.16□□□□□ -2.44
Trav9-4A0A0B4J1K2 Snord82-201ENSMUST00000082889 70 ntBASIC-0.16□□□□□ -2.44
Trav9-4A0A0B4J1K2 Gm25627-201ENSMUST00000084003 153 ntBASIC-0.16□□□□□ -2.44
Trav9-4A0A0B4J1K2 Rgs13-202ENSMUST00000111941 1545 ntAPPRIS P1 TSL 1 (best) BASIC-0.17□□□□□ -2.44
Trav9-4A0A0B4J1K2 Mir709-201ENSMUST00000102190 88 ntBASIC-0.17□□□□□ -2.44
Trav9-4A0A0B4J1K2 2210418O10Rik-202ENSMUST00000135430 195 ntTSL 5 BASIC-0.17□□□□□ -2.44
Trav9-4A0A0B4J1K2 Mir3089-201ENSMUST00000175350 84 ntBASIC-0.17□□□□□ -2.44
Trav9-4A0A0B4J1K2 Gm28001-201ENSMUST00000183561 117 ntBASIC-0.17□□□□□ -2.44
Trav9-4A0A0B4J1K2 Gm29352-201ENSMUST00000188054 544 ntBASIC-0.17□□□□□ -2.44
Trav9-4A0A0B4J1K2 Gm38333-201ENSMUST00000193608 604 ntBASIC-0.17□□□□□ -2.44
Trav9-4A0A0B4J1K2 Gm44990-201ENSMUST00000203922 217 ntBASIC-0.17□□□□□ -2.44
Trav9-4A0A0B4J1K2 Gm45658-201ENSMUST00000209197 580 ntBASIC-0.17□□□□□ -2.44
Trav9-4A0A0B4J1K2 Gm19572-201ENSMUST00000214326 338 ntBASIC-0.17□□□□□ -2.44
Trav9-4A0A0B4J1K2 Gm6369-201ENSMUST00000069626 412 ntBASIC-0.17□□□□□ -2.44
Trav9-4A0A0B4J1K2 Gm23140-201ENSMUST00000082487 107 ntBASIC-0.17□□□□□ -2.44
Trav9-4A0A0B4J1K2 Gm23347-201ENSMUST00000083823 82 ntBASIC-0.17□□□□□ -2.44
Trav9-4A0A0B4J1K2 Gm22021-201ENSMUST00000104353 107 ntBASIC-0.18□□□□□ -2.44
Trav9-4A0A0B4J1K2 Mir872-201ENSMUST00000104728 81 ntBASIC-0.18□□□□□ -2.44
Trav9-4A0A0B4J1K2 Gm26278-201ENSMUST00000157098 132 ntBASIC-0.18□□□□□ -2.44
Trav9-4A0A0B4J1K2 Gm23981-201ENSMUST00000157136 106 ntBASIC-0.18□□□□□ -2.44
Trav9-4A0A0B4J1K2 Gm26149-201ENSMUST00000157432 108 ntBASIC-0.18□□□□□ -2.44
Trav9-4A0A0B4J1K2 Gm23994-201ENSMUST00000158059 88 ntBASIC-0.18□□□□□ -2.44
Trav9-4A0A0B4J1K2 Gm22888-201ENSMUST00000158640 77 ntBASIC-0.18□□□□□ -2.44
Trav9-4A0A0B4J1K2 Gm28688-201ENSMUST00000187301 268 ntBASIC-0.18□□□□□ -2.44
Trav9-4A0A0B4J1K2 BE692007-203ENSMUST00000189306 362 ntTSL 3 BASIC-0.18□□□□□ -2.44
Trav9-4A0A0B4J1K2 Gm45315-201ENSMUST00000209283 333 ntBASIC-0.18□□□□□ -2.44
Trav9-4A0A0B4J1K2 AC124346.1-201ENSMUST00000218539 364 ntBASIC-0.18□□□□□ -2.44
Trav9-4A0A0B4J1K2 Mirlet7g-201ENSMUST00000083506 88 ntBASIC-0.18□□□□□ -2.44
Trav9-4A0A0B4J1K2 Gm24256-201ENSMUST00000083696 84 ntBASIC-0.18□□□□□ -2.44
Trav9-4A0A0B4J1K2 Ighv1-47-201ENSMUST00000103518 294 ntAPPRIS P1 BASIC-0.19□□□□□ -2.44
Trav9-4A0A0B4J1K2 Gm25838-201ENSMUST00000158920 120 ntBASIC-0.19□□□□□ -2.44
Trav9-4A0A0B4J1K2 Mir1933-201ENSMUST00000158930 88 ntBASIC-0.19□□□□□ -2.44
Trav9-4A0A0B4J1K2 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC-0.19□□□□□ -2.44
Trav9-4A0A0B4J1K2 Gm26501-201ENSMUST00000178307 107 ntBASIC-0.19□□□□□ -2.44
Trav9-4A0A0B4J1K2 Gm28541-201ENSMUST00000185206 442 ntTSL 5 BASIC-0.19□□□□□ -2.44
Trav9-4A0A0B4J1K2 Gm28585-201ENSMUST00000187587 442 ntTSL 5 BASIC-0.19□□□□□ -2.44
Trav9-4A0A0B4J1K2 Gm28811-201ENSMUST00000190650 442 ntTSL 5 BASIC-0.19□□□□□ -2.44
Trav9-4A0A0B4J1K2 Topbp1-ps2-201ENSMUST00000191289 189 ntBASIC-0.19□□□□□ -2.44
Trav9-4A0A0B4J1K2 Gm37808-201ENSMUST00000192038 442 ntTSL 5 BASIC-0.19□□□□□ -2.44
Trav9-4A0A0B4J1K2 Gm18296-201ENSMUST00000192475 783 ntBASIC-0.19□□□□□ -2.44
Trav9-4A0A0B4J1K2 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC-0.19□□□□□ -2.44
Trav9-4A0A0B4J1K2 AC192616.3-201ENSMUST00000220797 1124 ntBASIC-0.19□□□□□ -2.44
Trav9-4A0A0B4J1K2 Spinkl-201ENSMUST00000066328 593 ntAPPRIS P1 TSL 1 (best) BASIC-0.19□□□□□ -2.44
Trav9-4A0A0B4J1K2 Gm24268-201ENSMUST00000082990 110 ntBASIC-0.19□□□□□ -2.44
Trav9-4A0A0B4J1K2 Mir30c-2-201ENSMUST00000083633 84 ntBASIC-0.19□□□□□ -2.44
Trav9-4A0A0B4J1K2 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC-0.2□□□□□ -2.44
Trav9-4A0A0B4J1K2 Gm22885-201ENSMUST00000157410 107 ntBASIC-0.2□□□□□ -2.44
Trav9-4A0A0B4J1K2 Gm22340-201ENSMUST00000157717 114 ntBASIC-0.2□□□□□ -2.44
Trav9-4A0A0B4J1K2 Gm25300-201ENSMUST00000175284 84 ntBASIC-0.2□□□□□ -2.44
Trav9-4A0A0B4J1K2 AC153968.2-201ENSMUST00000215579 1140 ntBASIC-0.2□□□□□ -2.44
Trav9-4A0A0B4J1K2 mt-Atp6-201ENSMUST00000082408 681 ntAPPRIS P1 BASIC-0.2□□□□□ -2.44
Trav9-4A0A0B4J1K2 n-R5s42-201ENSMUST00000082697 104 ntBASIC-0.2□□□□□ -2.44
Trav9-4A0A0B4J1K2 Gm25789-201ENSMUST00000083294 76 ntBASIC-0.2□□□□□ -2.44
Trav9-4A0A0B4J1K2 Mir142b-201ENSMUST00000083486 115 ntBASIC-0.2□□□□□ -2.44
Trav9-4A0A0B4J1K2 Mir126a-201ENSMUST00000083606 73 ntBASIC-0.2□□□□□ -2.44
Trav9-4A0A0B4J1K2 n-R5s73-201ENSMUST00000122508 107 ntBASIC-0.21□□□□□ -2.44
Trav9-4A0A0B4J1K2 Gm24191-201ENSMUST00000157977 122 ntBASIC-0.21□□□□□ -2.44
Trav9-4A0A0B4J1K2 Gm17067-202ENSMUST00000180131 123 ntBASIC-0.21□□□□□ -2.44
Trav9-4A0A0B4J1K2 Gm28011-201ENSMUST00000184097 175 ntBASIC-0.21□□□□□ -2.44
Trav9-4A0A0B4J1K2 AC167192.4-201ENSMUST00000224087 993 ntBASIC-0.21□□□□□ -2.44
Trav9-4A0A0B4J1K2 Snord68-201ENSMUST00000082516 86 ntBASIC-0.21□□□□□ -2.44
Retrieved 100 of 76,532 protein–RNA pairs in 91.5 ms