Protein–RNA interactions for Protein: A0A0B4J1J9

Trav11, T cell receptor alpha variable 11 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav11A0A0B4J1J9 Mir362-201ENSMUST00000093592 65 ntBASIC0.55□□□□□ -2.32
Trav11A0A0B4J1J9 Gm23142-201ENSMUST00000101848 105 ntBASIC0.54□□□□□ -2.32
Trav11A0A0B4J1J9 Gm26240-201ENSMUST00000101893 105 ntBASIC0.54□□□□□ -2.32
Trav11A0A0B4J1J9 1700120G11Rik-201ENSMUST00000150273 491 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
Trav11A0A0B4J1J9 Gm24747-201ENSMUST00000157835 87 ntBASIC0.54□□□□□ -2.32
Trav11A0A0B4J1J9 Gm24393-201ENSMUST00000158135 97 ntBASIC0.54□□□□□ -2.32
Trav11A0A0B4J1J9 Gm24154-201ENSMUST00000175261 130 ntBASIC0.54□□□□□ -2.32
Trav11A0A0B4J1J9 Gm25284-201ENSMUST00000180345 141 ntBASIC0.54□□□□□ -2.32
Trav11A0A0B4J1J9 Mir3087-201ENSMUST00000199405 56 ntBASIC0.54□□□□□ -2.32
Trav11A0A0B4J1J9 Gm18213-201ENSMUST00000207850 178 ntBASIC0.54□□□□□ -2.32
Trav11A0A0B4J1J9 Gm46993-201ENSMUST00000220708 259 ntBASIC0.54□□□□□ -2.32
Trav11A0A0B4J1J9 AC166358.7-201ENSMUST00000221132 108 ntBASIC0.54□□□□□ -2.32
Trav11A0A0B4J1J9 AC125543.5-201ENSMUST00000222799 108 ntBASIC0.54□□□□□ -2.32
Trav11A0A0B4J1J9 Rps24-ps2-201ENSMUST00000091375 395 ntBASIC0.54□□□□□ -2.32
Trav11A0A0B4J1J9 Gm26135-201ENSMUST00000101993 72 ntBASIC0.53□□□□□ -2.32
Trav11A0A0B4J1J9 Gm14568-201ENSMUST00000119321 294 ntBASIC0.53□□□□□ -2.32
Trav11A0A0B4J1J9 Gm12770-201ENSMUST00000121734 462 ntBASIC0.53□□□□□ -2.32
Trav11A0A0B4J1J9 Gm20630-201ENSMUST00000177387 551 ntBASIC0.53□□□□□ -2.32
Trav11A0A0B4J1J9 Gm23267-201ENSMUST00000178490 132 ntBASIC0.53□□□□□ -2.32
Trav11A0A0B4J1J9 Snord50b-201ENSMUST00000178497 72 ntBASIC0.53□□□□□ -2.32
Trav11A0A0B4J1J9 Mir6364-201ENSMUST00000183396 86 ntBASIC0.53□□□□□ -2.32
Trav11A0A0B4J1J9 Gm27410-201ENSMUST00000183851 115 ntBASIC0.53□□□□□ -2.32
Trav11A0A0B4J1J9 Mir6240-201ENSMUST00000184281 117 ntBASIC0.53□□□□□ -2.32
Trav11A0A0B4J1J9 Mir7665-201ENSMUST00000184907 63 ntBASIC0.53□□□□□ -2.32
Trav11A0A0B4J1J9 Gm28921-201ENSMUST00000190219 378 ntBASIC0.53□□□□□ -2.32
Trav11A0A0B4J1J9 CT033781.2-201ENSMUST00000221113 153 ntBASIC0.53□□□□□ -2.32
Trav11A0A0B4J1J9 Mir19b-2-201ENSMUST00000083539 84 ntBASIC0.53□□□□□ -2.32
Trav11A0A0B4J1J9 Mir27b-201ENSMUST00000083541 73 ntBASIC0.53□□□□□ -2.32
Trav11A0A0B4J1J9 Gm25627-201ENSMUST00000084003 153 ntBASIC0.53□□□□□ -2.32
Trav11A0A0B4J1J9 Gm23203-201ENSMUST00000104374 107 ntBASIC0.52□□□□□ -2.33
Trav11A0A0B4J1J9 Gm16032-201ENSMUST00000118534 168 ntBASIC0.52□□□□□ -2.33
Trav11A0A0B4J1J9 Mup-ps22-201ENSMUST00000121611 243 ntBASIC0.52□□□□□ -2.33
Trav11A0A0B4J1J9 Vmn1r-ps9-201ENSMUST00000177047 358 ntBASIC0.52□□□□□ -2.33
Trav11A0A0B4J1J9 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC0.52□□□□□ -2.33
Trav11A0A0B4J1J9 Gm27539-201ENSMUST00000184971 224 ntBASIC0.52□□□□□ -2.33
Trav11A0A0B4J1J9 Mir7118-201ENSMUST00000197760 61 ntBASIC0.52□□□□□ -2.33
Trav11A0A0B4J1J9 Gm43911-201ENSMUST00000203097 76 ntBASIC0.52□□□□□ -2.33
Trav11A0A0B4J1J9 Gm44473-201ENSMUST00000204039 152 ntBASIC0.52□□□□□ -2.33
Trav11A0A0B4J1J9 AC104832.1-201ENSMUST00000222938 550 ntBASIC0.52□□□□□ -2.33
Trav11A0A0B4J1J9 AC163646.2-201ENSMUST00000227962 141 ntBASIC0.52□□□□□ -2.33
Trav11A0A0B4J1J9 Gm24283-201ENSMUST00000104233 107 ntBASIC0.51□□□□□ -2.33
Trav11A0A0B4J1J9 Gm11798-201ENSMUST00000119150 421 ntBASIC0.51□□□□□ -2.33
Trav11A0A0B4J1J9 Gm15379-201ENSMUST00000121224 648 ntBASIC0.51□□□□□ -2.33
Trav11A0A0B4J1J9 1700047A11Rik-202ENSMUST00000153552 622 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
Trav11A0A0B4J1J9 Gm23232-201ENSMUST00000157300 105 ntBASIC0.51□□□□□ -2.33
Trav11A0A0B4J1J9 Gm23996-201ENSMUST00000158062 131 ntBASIC0.51□□□□□ -2.33
Trav11A0A0B4J1J9 Gm23898-201ENSMUST00000158111 103 ntBASIC0.51□□□□□ -2.33
Trav11A0A0B4J1J9 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC0.51□□□□□ -2.33
Trav11A0A0B4J1J9 Gm15446-203ENSMUST00000170826 192 ntTSL 5 BASIC0.51□□□□□ -2.33
Trav11A0A0B4J1J9 Gm7958-201ENSMUST00000178255 468 ntBASIC0.51□□□□□ -2.33
Trav11A0A0B4J1J9 Gm7950-201ENSMUST00000179633 468 ntBASIC0.51□□□□□ -2.33
Trav11A0A0B4J1J9 Gm27540-201ENSMUST00000184950 187 ntBASIC0.51□□□□□ -2.33
Trav11A0A0B4J1J9 Gm44811-201ENSMUST00000209120 228 ntBASIC0.51□□□□□ -2.33
Trav11A0A0B4J1J9 Gm5023-201ENSMUST00000217442 587 ntBASIC0.51□□□□□ -2.33
Trav11A0A0B4J1J9 AC159885.1-201ENSMUST00000222221 199 ntBASIC0.51□□□□□ -2.33
Trav11A0A0B4J1J9 Gm23735-201ENSMUST00000082551 134 ntBASIC0.51□□□□□ -2.33
Trav11A0A0B4J1J9 Gm22743-201ENSMUST00000083445 133 ntBASIC0.51□□□□□ -2.33
Trav11A0A0B4J1J9 Mir324-201ENSMUST00000083600 89 ntBASIC0.51□□□□□ -2.33
Trav11A0A0B4J1J9 Gm11856-201ENSMUST00000118712 276 ntBASIC0.5□□□□□ -2.33
Trav11A0A0B4J1J9 Gm14491-201ENSMUST00000121919 199 ntBASIC0.5□□□□□ -2.33
Trav11A0A0B4J1J9 Gm25825-201ENSMUST00000157091 124 ntBASIC0.5□□□□□ -2.33
Trav11A0A0B4J1J9 Gm26358-201ENSMUST00000158215 97 ntBASIC0.5□□□□□ -2.33
Trav11A0A0B4J1J9 Gm24942-201ENSMUST00000158328 114 ntBASIC0.5□□□□□ -2.33
Trav11A0A0B4J1J9 Mir15a-201ENSMUST00000175266 84 ntBASIC0.5□□□□□ -2.33
Trav11A0A0B4J1J9 Olfr1478-ps1-201ENSMUST00000208393 391 ntBASIC0.5□□□□□ -2.33
Trav11A0A0B4J1J9 Olfr1070-ps1-201ENSMUST00000215939 388 ntBASIC0.5□□□□□ -2.33
Trav11A0A0B4J1J9 Snord33-201ENSMUST00000083694 84 ntBASIC0.5□□□□□ -2.33
Trav11A0A0B4J1J9 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC0.5□□□□□ -2.33
Trav11A0A0B4J1J9 Mir767-201ENSMUST00000103256 107 ntBASIC0.49□□□□□ -2.33
Trav11A0A0B4J1J9 Gm25783-201ENSMUST00000122525 190 ntBASIC0.49□□□□□ -2.33
Trav11A0A0B4J1J9 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC0.49□□□□□ -2.33
Trav11A0A0B4J1J9 Gm23921-201ENSMUST00000175258 107 ntBASIC0.49□□□□□ -2.33
Trav11A0A0B4J1J9 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC0.49□□□□□ -2.33
Trav11A0A0B4J1J9 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC0.49□□□□□ -2.33
Trav11A0A0B4J1J9 AL935138.1-201ENSMUST00000215309 196 ntBASIC0.49□□□□□ -2.33
Trav11A0A0B4J1J9 Mir34a-201ENSMUST00000083559 102 ntBASIC0.49□□□□□ -2.33
Trav11A0A0B4J1J9 Gm24164-201ENSMUST00000093663 104 ntBASIC0.49□□□□□ -2.33
Trav11A0A0B4J1J9 Traj13-201ENSMUST00000103728 57 ntAPPRIS P1 BASIC0.48□□□□□ -2.33
Trav11A0A0B4J1J9 n-R5s70-201ENSMUST00000122650 116 ntBASIC0.48□□□□□ -2.33
Trav11A0A0B4J1J9 Gm13565-201ENSMUST00000133596 700 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
Trav11A0A0B4J1J9 Gm23328-201ENSMUST00000157418 132 ntBASIC0.48□□□□□ -2.33
Trav11A0A0B4J1J9 Gm22215-201ENSMUST00000157558 96 ntBASIC0.48□□□□□ -2.33
Trav11A0A0B4J1J9 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC0.48□□□□□ -2.33
Trav11A0A0B4J1J9 Gm21518-201ENSMUST00000178115 567 ntTSL 5 BASIC0.48□□□□□ -2.33
Trav11A0A0B4J1J9 Gm20736-201ENSMUST00000178198 567 ntTSL 5 BASIC0.48□□□□□ -2.33
Trav11A0A0B4J1J9 Gm20843-201ENSMUST00000178505 567 ntTSL 5 BASIC0.48□□□□□ -2.33
Trav11A0A0B4J1J9 Gm21209-201ENSMUST00000178556 567 ntTSL 5 BASIC0.48□□□□□ -2.33
Trav11A0A0B4J1J9 Gm21258-201ENSMUST00000178673 567 ntTSL 5 BASIC0.48□□□□□ -2.33
Trav11A0A0B4J1J9 Gm20888-201ENSMUST00000178934 567 ntTSL 5 BASIC0.48□□□□□ -2.33
Trav11A0A0B4J1J9 Gm21650-201ENSMUST00000179073 567 ntTSL 5 BASIC0.48□□□□□ -2.33
Trav11A0A0B4J1J9 Gm20937-201ENSMUST00000180329 567 ntTSL 5 BASIC0.48□□□□□ -2.33
Trav11A0A0B4J1J9 Gm27365-201ENSMUST00000184041 177 ntBASIC0.48□□□□□ -2.33
Trav11A0A0B4J1J9 Mir7059-201ENSMUST00000184825 59 ntBASIC0.48□□□□□ -2.33
Trav11A0A0B4J1J9 Gm43250-201ENSMUST00000196536 273 ntBASIC0.48□□□□□ -2.33
Trav11A0A0B4J1J9 Olfr865-ps1-201ENSMUST00000212071 85 ntBASIC0.48□□□□□ -2.33
Trav11A0A0B4J1J9 AC158598.2-201ENSMUST00000213397 3832 ntBASIC0.48□□□□□ -2.33
Trav11A0A0B4J1J9 Mir216a-201ENSMUST00000083605 72 ntBASIC0.48□□□□□ -2.33
Trav11A0A0B4J1J9 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC0.48□□□□□ -2.33
Trav11A0A0B4J1J9 Gm14761-201ENSMUST00000121363 262 ntBASIC0.47□□□□□ -2.33
Trav11A0A0B4J1J9 Gm22228-201ENSMUST00000157364 101 ntBASIC0.47□□□□□ -2.33
Retrieved 100 of 76,532 protein–RNA pairs in 83.4 ms