Protein–RNA interactions for Protein: A0A0B4J1G7

Trbv1, T cell receptor beta, variable 1 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv1A0A0B4J1G7 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC0.78□□□□□ -2.28
Trbv1A0A0B4J1G7 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC0.78□□□□□ -2.28
Trbv1A0A0B4J1G7 Gm14491-201ENSMUST00000121919 199 ntBASIC0.78□□□□□ -2.28
Trbv1A0A0B4J1G7 Gm11334-201ENSMUST00000121969 156 ntBASIC0.78□□□□□ -2.28
Trbv1A0A0B4J1G7 Vmn1r-ps69-201ENSMUST00000172759 201 ntBASIC0.78□□□□□ -2.28
Trbv1A0A0B4J1G7 Gm23636-201ENSMUST00000175070 95 ntBASIC0.78□□□□□ -2.28
Trbv1A0A0B4J1G7 Mir7093-201ENSMUST00000184195 101 ntBASIC0.78□□□□□ -2.28
Trbv1A0A0B4J1G7 Mir7665-201ENSMUST00000184907 63 ntBASIC0.78□□□□□ -2.28
Trbv1A0A0B4J1G7 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC0.78□□□□□ -2.28
Trbv1A0A0B4J1G7 Gm43976-201ENSMUST00000203637 235 ntBASIC0.78□□□□□ -2.28
Trbv1A0A0B4J1G7 Gm44687-201ENSMUST00000204975 235 ntBASIC0.78□□□□□ -2.28
Trbv1A0A0B4J1G7 AC125020.2-201ENSMUST00000218894 348 ntBASIC0.78□□□□□ -2.28
Trbv1A0A0B4J1G7 Gm25078-201ENSMUST00000082530 107 ntBASIC0.78□□□□□ -2.28
Trbv1A0A0B4J1G7 n-R5s94-201ENSMUST00000082573 119 ntBASIC0.78□□□□□ -2.28
Trbv1A0A0B4J1G7 Gm25636-201ENSMUST00000082666 133 ntBASIC0.78□□□□□ -2.28
Trbv1A0A0B4J1G7 Snora41-201ENSMUST00000082668 132 ntBASIC0.78□□□□□ -2.28
Trbv1A0A0B4J1G7 Gm25128-201ENSMUST00000083339 76 ntBASIC0.78□□□□□ -2.28
Trbv1A0A0B4J1G7 Mir219a-2-201ENSMUST00000083551 97 ntBASIC0.78□□□□□ -2.28
Trbv1A0A0B4J1G7 Mir767-201ENSMUST00000103256 107 ntBASIC0.77□□□□□ -2.29
Trbv1A0A0B4J1G7 Gm11794-201ENSMUST00000119446 237 ntBASIC0.77□□□□□ -2.29
Trbv1A0A0B4J1G7 Gm14980-201ENSMUST00000121247 736 ntBASIC0.77□□□□□ -2.29
Trbv1A0A0B4J1G7 Gm22477-201ENSMUST00000122569 316 ntBASIC0.77□□□□□ -2.29
Trbv1A0A0B4J1G7 Gm26004-201ENSMUST00000158804 116 ntBASIC0.77□□□□□ -2.29
Trbv1A0A0B4J1G7 Gm23967-201ENSMUST00000175062 78 ntBASIC0.77□□□□□ -2.29
Trbv1A0A0B4J1G7 Vmn1r-ps23-201ENSMUST00000175708 295 ntBASIC0.77□□□□□ -2.29
Trbv1A0A0B4J1G7 Mir8119-201ENSMUST00000183371 129 ntBASIC0.77□□□□□ -2.29
Trbv1A0A0B4J1G7 Gm27540-201ENSMUST00000184950 187 ntBASIC0.77□□□□□ -2.29
Trbv1A0A0B4J1G7 Gm28661-201ENSMUST00000188231 681 ntBASIC0.77□□□□□ -2.29
Trbv1A0A0B4J1G7 Igkv15-102-201ENSMUST00000197885 287 ntBASIC0.77□□□□□ -2.29
Trbv1A0A0B4J1G7 Gm44473-201ENSMUST00000204039 152 ntBASIC0.77□□□□□ -2.29
Trbv1A0A0B4J1G7 Gm45543-201ENSMUST00000209327 88 ntBASIC0.77□□□□□ -2.29
Trbv1A0A0B4J1G7 CT954323.1-201ENSMUST00000222774 229 ntBASIC0.77□□□□□ -2.29
Trbv1A0A0B4J1G7 AC168062.3-201ENSMUST00000227025 165 ntBASIC0.77□□□□□ -2.29
Trbv1A0A0B4J1G7 AC163646.2-201ENSMUST00000227962 141 ntBASIC0.77□□□□□ -2.29
Trbv1A0A0B4J1G7 Gm22294-201ENSMUST00000083308 104 ntBASIC0.77□□□□□ -2.29
Trbv1A0A0B4J1G7 Gm43960-201ENSMUST00000204249 5020 ntBASIC0.76□□□□□ -2.29
Trbv1A0A0B4J1G7 Gm14914-201ENSMUST00000117576 2031 ntBASIC0.76□□□□□ -2.29
Trbv1A0A0B4J1G7 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC0.76□□□□□ -2.29
Trbv1A0A0B4J1G7 Gm26074-201ENSMUST00000104063 129 ntBASIC0.76□□□□□ -2.29
Trbv1A0A0B4J1G7 Gm23705-201ENSMUST00000104370 130 ntBASIC0.76□□□□□ -2.29
Trbv1A0A0B4J1G7 Mup-ps22-201ENSMUST00000121611 243 ntBASIC0.76□□□□□ -2.29
Trbv1A0A0B4J1G7 Gm12785-201ENSMUST00000122052 172 ntBASIC0.76□□□□□ -2.29
Trbv1A0A0B4J1G7 Gm23542-201ENSMUST00000158208 96 ntBASIC0.76□□□□□ -2.29
Trbv1A0A0B4J1G7 Gm23262-201ENSMUST00000158323 168 ntBASIC0.76□□□□□ -2.29
Trbv1A0A0B4J1G7 Gm10772-201ENSMUST00000167981 255 ntAPPRIS P1 BASIC0.76□□□□□ -2.29
Trbv1A0A0B4J1G7 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
Trbv1A0A0B4J1G7 Gm25671-201ENSMUST00000178612 105 ntBASIC0.76□□□□□ -2.29
Trbv1A0A0B4J1G7 Gm23307-201ENSMUST00000179167 105 ntBASIC0.76□□□□□ -2.29
Trbv1A0A0B4J1G7 Gm25286-201ENSMUST00000179790 105 ntBASIC0.76□□□□□ -2.29
Trbv1A0A0B4J1G7 Mir376a-201ENSMUST00000197584 68 ntBASIC0.76□□□□□ -2.29
Trbv1A0A0B4J1G7 AC157476.1-201ENSMUST00000215555 169 ntBASIC0.76□□□□□ -2.29
Trbv1A0A0B4J1G7 Gm46993-201ENSMUST00000220708 259 ntBASIC0.76□□□□□ -2.29
Trbv1A0A0B4J1G7 AC133083.2-201ENSMUST00000222826 272 ntTSL 5 BASIC0.76□□□□□ -2.29
Trbv1A0A0B4J1G7 AC173482.5-201ENSMUST00000224181 327 ntBASIC0.76□□□□□ -2.29
Trbv1A0A0B4J1G7 Gm24431-201ENSMUST00000104073 66 ntBASIC0.75□□□□□ -2.29
Trbv1A0A0B4J1G7 Gm23106-201ENSMUST00000157554 101 ntBASIC0.75□□□□□ -2.29
Trbv1A0A0B4J1G7 Gm22551-201ENSMUST00000157795 103 ntBASIC0.75□□□□□ -2.29
Trbv1A0A0B4J1G7 Gm23779-201ENSMUST00000157938 64 ntBASIC0.75□□□□□ -2.29
Trbv1A0A0B4J1G7 Gm22945-201ENSMUST00000158557 157 ntBASIC0.75□□□□□ -2.29
Trbv1A0A0B4J1G7 Gm25768-201ENSMUST00000158570 98 ntBASIC0.75□□□□□ -2.29
Trbv1A0A0B4J1G7 Mir344d-3-201ENSMUST00000175458 80 ntBASIC0.75□□□□□ -2.29
Trbv1A0A0B4J1G7 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC0.75□□□□□ -2.29
Trbv1A0A0B4J1G7 Scgb1b6-ps-201ENSMUST00000185337 199 ntBASIC0.75□□□□□ -2.29
Trbv1A0A0B4J1G7 Gm20118-201ENSMUST00000187207 162 ntBASIC0.75□□□□□ -2.29
Trbv1A0A0B4J1G7 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC0.75□□□□□ -2.29
Trbv1A0A0B4J1G7 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC0.75□□□□□ -2.29
Trbv1A0A0B4J1G7 Olfr1070-ps1-201ENSMUST00000215939 388 ntBASIC0.75□□□□□ -2.29
Trbv1A0A0B4J1G7 Olfr136-205ENSMUST00000216963 1821 ntAPPRIS P1 TSL 5 BASIC0.74□□□□□ -2.29
Trbv1A0A0B4J1G7 Gm22021-201ENSMUST00000104353 107 ntBASIC0.74□□□□□ -2.29
Trbv1A0A0B4J1G7 A130030D18Rik-201ENSMUST00000128608 654 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
Trbv1A0A0B4J1G7 Gm25663-201ENSMUST00000157698 135 ntBASIC0.74□□□□□ -2.29
Trbv1A0A0B4J1G7 Gm23759-201ENSMUST00000158351 268 ntBASIC0.74□□□□□ -2.29
Trbv1A0A0B4J1G7 Gm22425-201ENSMUST00000158532 138 ntBASIC0.74□□□□□ -2.29
Trbv1A0A0B4J1G7 Ranbp2-ps2-201ENSMUST00000184379 370 ntBASIC0.74□□□□□ -2.29
Trbv1A0A0B4J1G7 Gm28344-201ENSMUST00000185704 279 ntBASIC0.74□□□□□ -2.29
Trbv1A0A0B4J1G7 Gm29229-201ENSMUST00000188874 323 ntBASIC0.74□□□□□ -2.29
Trbv1A0A0B4J1G7 Gm43911-201ENSMUST00000203097 76 ntBASIC0.74□□□□□ -2.29
Trbv1A0A0B4J1G7 Klk1b28-ps-201ENSMUST00000206374 217 ntBASIC0.74□□□□□ -2.29
Trbv1A0A0B4J1G7 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC0.74□□□□□ -2.29
Trbv1A0A0B4J1G7 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC0.74□□□□□ -2.29
Trbv1A0A0B4J1G7 AC145736.2-201ENSMUST00000216305 365 ntBASIC0.74□□□□□ -2.29
Trbv1A0A0B4J1G7 AC098718.2-201ENSMUST00000226822 285 ntBASIC0.74□□□□□ -2.29
Trbv1A0A0B4J1G7 AC160550.1-201ENSMUST00000228659 181 ntBASIC0.74□□□□□ -2.29
Trbv1A0A0B4J1G7 Gm26224-201ENSMUST00000082506 80 ntBASIC0.74□□□□□ -2.29
Trbv1A0A0B4J1G7 Gm23299-201ENSMUST00000082708 79 ntBASIC0.74□□□□□ -2.29
Trbv1A0A0B4J1G7 Mir22-201ENSMUST00000083595 95 ntBASIC0.74□□□□□ -2.29
Trbv1A0A0B4J1G7 Olfr1154-202ENSMUST00000215017 2917 ntAPPRIS P1 TSL 5 BASIC0.73□□□□□ -2.29
Trbv1A0A0B4J1G7 Gm24116-201ENSMUST00000103975 107 ntBASIC0.73□□□□□ -2.29
Trbv1A0A0B4J1G7 Gm23329-201ENSMUST00000157415 108 ntBASIC0.73□□□□□ -2.29
Trbv1A0A0B4J1G7 Gm25982-201ENSMUST00000157920 101 ntBASIC0.73□□□□□ -2.29
Trbv1A0A0B4J1G7 Gm22085-201ENSMUST00000158344 110 ntBASIC0.73□□□□□ -2.29
Trbv1A0A0B4J1G7 Mir3471-1-201ENSMUST00000175139 131 ntBASIC0.73□□□□□ -2.29
Trbv1A0A0B4J1G7 Gm24154-201ENSMUST00000175261 130 ntBASIC0.73□□□□□ -2.29
Trbv1A0A0B4J1G7 Gm25750-201ENSMUST00000175483 112 ntBASIC0.73□□□□□ -2.29
Trbv1A0A0B4J1G7 Gm25450-201ENSMUST00000179144 107 ntBASIC0.73□□□□□ -2.29
Trbv1A0A0B4J1G7 Gm19777-201ENSMUST00000191940 358 ntBASIC0.73□□□□□ -2.29
Trbv1A0A0B4J1G7 AL928567.1-201ENSMUST00000197891 138 ntBASIC0.73□□□□□ -2.29
Trbv1A0A0B4J1G7 Snord42a-201ENSMUST00000082606 65 ntBASIC0.73□□□□□ -2.29
Trbv1A0A0B4J1G7 Gm23412-201ENSMUST00000083017 107 ntBASIC0.73□□□□□ -2.29
Trbv1A0A0B4J1G7 Gm22884-201ENSMUST00000083127 140 ntBASIC0.73□□□□□ -2.29
Retrieved 100 of 76,532 protein–RNA pairs in 96.9 ms