Protein–RNA interactions for Protein: A0A075B648

Trav12-3, T cell receptor alpha variable 12-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-3A0A075B648 AC155839.1-201ENSMUST00000200105 147 ntBASIC0.75□□□□□ -2.29
Trav12-3A0A075B648 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC0.75□□□□□ -2.29
Trav12-3A0A075B648 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC0.75□□□□□ -2.29
Trav12-3A0A075B648 Gm25851-201ENSMUST00000082794 107 ntBASIC0.75□□□□□ -2.29
Trav12-3A0A075B648 Gm22364-201ENSMUST00000083097 98 ntBASIC0.75□□□□□ -2.29
Trav12-3A0A075B648 Gm24042-201ENSMUST00000083114 103 ntBASIC0.75□□□□□ -2.29
Trav12-3A0A075B648 Gm22743-201ENSMUST00000083445 133 ntBASIC0.75□□□□□ -2.29
Trav12-3A0A075B648 Gm43877-201ENSMUST00000205029 2238 ntBASIC0.74□□□□□ -2.29
Trav12-3A0A075B648 Gm24627-201ENSMUST00000122764 138 ntBASIC0.74□□□□□ -2.29
Trav12-3A0A075B648 Gm23865-201ENSMUST00000157723 97 ntBASIC0.74□□□□□ -2.29
Trav12-3A0A075B648 Gm23996-201ENSMUST00000158062 131 ntBASIC0.74□□□□□ -2.29
Trav12-3A0A075B648 Mir8119-201ENSMUST00000183371 129 ntBASIC0.74□□□□□ -2.29
Trav12-3A0A075B648 Gm44358-201ENSMUST00000196301 98 ntBASIC0.74□□□□□ -2.29
Trav12-3A0A075B648 Mir3535-201ENSMUST00000197651 147 ntBASIC0.74□□□□□ -2.29
Trav12-3A0A075B648 Gm45738-201ENSMUST00000203645 233 ntTSL 5 BASIC0.74□□□□□ -2.29
Trav12-3A0A075B648 Gm45296-201ENSMUST00000209625 205 ntBASIC0.74□□□□□ -2.29
Trav12-3A0A075B648 Gm25650-201ENSMUST00000083784 162 ntBASIC0.74□□□□□ -2.29
Trav12-3A0A075B648 Gm24523-201ENSMUST00000083965 132 ntBASIC0.74□□□□□ -2.29
Trav12-3A0A075B648 Gm10217-201ENSMUST00000088080 135 ntAPPRIS P1 TSL 5 BASIC0.74□□□□□ -2.29
Trav12-3A0A075B648 Gm21876-201ENSMUST00000096511 282 ntAPPRIS P1 TSL 5 BASIC0.74□□□□□ -2.29
Trav12-3A0A075B648 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
Trav12-3A0A075B648 Gm23114-201ENSMUST00000158478 117 ntBASIC0.73□□□□□ -2.29
Trav12-3A0A075B648 Gm23182-201ENSMUST00000158688 135 ntBASIC0.73□□□□□ -2.29
Trav12-3A0A075B648 Gm26005-201ENSMUST00000158802 134 ntBASIC0.73□□□□□ -2.29
Trav12-3A0A075B648 Gm16584-201ENSMUST00000159267 189 ntBASIC0.73□□□□□ -2.29
Trav12-3A0A075B648 Gm28881-201ENSMUST00000187710 470 ntTSL 3 BASIC0.73□□□□□ -2.29
Trav12-3A0A075B648 Gm28862-201ENSMUST00000188246 163 ntBASIC0.73□□□□□ -2.29
Trav12-3A0A075B648 Gm28921-201ENSMUST00000190219 378 ntBASIC0.73□□□□□ -2.29
Trav12-3A0A075B648 Gm37763-201ENSMUST00000193445 120 ntBASIC0.73□□□□□ -2.29
Trav12-3A0A075B648 Gm44063-201ENSMUST00000203307 376 ntBASIC0.73□□□□□ -2.29
Trav12-3A0A075B648 Olfr277-ps1-201ENSMUST00000205749 285 ntBASIC0.73□□□□□ -2.29
Trav12-3A0A075B648 Olfr515-ps1-201ENSMUST00000208389 189 ntBASIC0.73□□□□□ -2.29
Trav12-3A0A075B648 CT033781.2-201ENSMUST00000221113 153 ntBASIC0.73□□□□□ -2.29
Trav12-3A0A075B648 Gm22248-201ENSMUST00000082482 150 ntBASIC0.73□□□□□ -2.29
Trav12-3A0A075B648 Gm25578-201ENSMUST00000083406 104 ntBASIC0.73□□□□□ -2.29
Trav12-3A0A075B648 Gm24817-201ENSMUST00000093672 105 ntBASIC0.73□□□□□ -2.29
Trav12-3A0A075B648 Gm8935-202ENSMUST00000105727 1959 ntBASIC0.72□□□□□ -2.29
Trav12-3A0A075B648 Gm24431-201ENSMUST00000104073 66 ntBASIC0.72□□□□□ -2.29
Trav12-3A0A075B648 Gm13560-201ENSMUST00000121865 329 ntBASIC0.72□□□□□ -2.29
Trav12-3A0A075B648 Gm26049-201ENSMUST00000157313 108 ntBASIC0.72□□□□□ -2.29
Trav12-3A0A075B648 Gm22802-201ENSMUST00000175621 89 ntBASIC0.72□□□□□ -2.29
Trav12-3A0A075B648 Gm27545-201ENSMUST00000184755 202 ntBASIC0.72□□□□□ -2.29
Trav12-3A0A075B648 Sprr2c-ps-201ENSMUST00000195581 301 ntBASIC0.72□□□□□ -2.29
Trav12-3A0A075B648 Gm38274-201ENSMUST00000195689 148 ntBASIC0.72□□□□□ -2.29
Trav12-3A0A075B648 Gm44352-201ENSMUST00000196358 110 ntBASIC0.72□□□□□ -2.29
Trav12-3A0A075B648 Gm6105-201ENSMUST00000200580 624 ntBASIC0.72□□□□□ -2.29
Trav12-3A0A075B648 Gm44419-201ENSMUST00000203338 229 ntBASIC0.72□□□□□ -2.29
Trav12-3A0A075B648 AC164117.2-201ENSMUST00000222090 327 ntBASIC0.72□□□□□ -2.29
Trav12-3A0A075B648 Gm22704-201ENSMUST00000083027 137 ntBASIC0.72□□□□□ -2.29
Trav12-3A0A075B648 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC0.72□□□□□ -2.29
Trav12-3A0A075B648 Gm23551-201ENSMUST00000116852 121 ntBASIC0.71□□□□□ -2.3
Trav12-3A0A075B648 Gm26255-201ENSMUST00000122492 103 ntBASIC0.71□□□□□ -2.3
Trav12-3A0A075B648 n-R5s63-201ENSMUST00000122756 103 ntBASIC0.71□□□□□ -2.3
Trav12-3A0A075B648 Gm24629-201ENSMUST00000122762 89 ntBASIC0.71□□□□□ -2.3
Trav12-3A0A075B648 Gm22228-201ENSMUST00000157364 101 ntBASIC0.71□□□□□ -2.3
Trav12-3A0A075B648 Gm23186-201ENSMUST00000180078 107 ntBASIC0.71□□□□□ -2.3
Trav12-3A0A075B648 Mir7063-201ENSMUST00000184158 91 ntBASIC0.71□□□□□ -2.3
Trav12-3A0A075B648 Ranbp2-ps5-201ENSMUST00000185141 379 ntBASIC0.71□□□□□ -2.3
Trav12-3A0A075B648 Gm38109-201ENSMUST00000195386 181 ntBASIC0.71□□□□□ -2.3
Trav12-3A0A075B648 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC0.71□□□□□ -2.3
Trav12-3A0A075B648 Gm29818-201ENSMUST00000218070 165 ntBASIC0.71□□□□□ -2.3
Trav12-3A0A075B648 RMST_1.1-206ENSMUST00000218255 309 ntTSL 3 BASIC0.71□□□□□ -2.3
Trav12-3A0A075B648 Gm30155-201ENSMUST00000223458 339 ntBASIC0.71□□□□□ -2.3
Trav12-3A0A075B648 Mir34a-201ENSMUST00000083559 102 ntBASIC0.71□□□□□ -2.3
Trav12-3A0A075B648 Gm14536-201ENSMUST00000118324 138 ntBASIC0.7□□□□□ -2.3
Trav12-3A0A075B648 Gm15002-201ENSMUST00000118406 452 ntBASIC0.7□□□□□ -2.3
Trav12-3A0A075B648 Gm11856-201ENSMUST00000118712 276 ntBASIC0.7□□□□□ -2.3
Trav12-3A0A075B648 Gm15162-201ENSMUST00000119325 283 ntBASIC0.7□□□□□ -2.3
Trav12-3A0A075B648 Gm15120-201ENSMUST00000120602 301 ntBASIC0.7□□□□□ -2.3
Trav12-3A0A075B648 Gm15027-201ENSMUST00000120922 138 ntBASIC0.7□□□□□ -2.3
Trav12-3A0A075B648 Gm13433-201ENSMUST00000121701 240 ntBASIC0.7□□□□□ -2.3
Trav12-3A0A075B648 Gm24595-201ENSMUST00000122501 110 ntBASIC0.7□□□□□ -2.3
Trav12-3A0A075B648 Gm10722-201ENSMUST00000151376 651 ntAPPRIS P1 TSL 5 BASIC0.7□□□□□ -2.3
Trav12-3A0A075B648 Gm25011-201ENSMUST00000158398 126 ntBASIC0.7□□□□□ -2.3
Trav12-3A0A075B648 Gm22367-201ENSMUST00000178930 132 ntBASIC0.7□□□□□ -2.3
Trav12-3A0A075B648 Mir6907-201ENSMUST00000183764 71 ntBASIC0.7□□□□□ -2.3
Trav12-3A0A075B648 Bsph2-ps-201ENSMUST00000183795 241 ntBASIC0.7□□□□□ -2.3
Trav12-3A0A075B648 Mir7k-201ENSMUST00000184115 110 ntBASIC0.7□□□□□ -2.3
Trav12-3A0A075B648 Gm28211-201ENSMUST00000190920 315 ntBASIC0.7□□□□□ -2.3
Trav12-3A0A075B648 AC132437.1-201ENSMUST00000218308 320 ntBASIC0.7□□□□□ -2.3
Trav12-3A0A075B648 Gm10264-201ENSMUST00000220589 429 ntBASIC0.7□□□□□ -2.3
Trav12-3A0A075B648 AC124182.1-201ENSMUST00000227091 321 ntBASIC0.7□□□□□ -2.3
Trav12-3A0A075B648 Mir22-201ENSMUST00000083595 95 ntBASIC0.7□□□□□ -2.3
Trav12-3A0A075B648 Snord35a-201ENSMUST00000083884 90 ntBASIC0.7□□□□□ -2.3
Trav12-3A0A075B648 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
Trav12-3A0A075B648 Gm15536-201ENSMUST00000121411 114 ntBASIC0.69□□□□□ -2.3
Trav12-3A0A075B648 Gm22814-201ENSMUST00000157452 104 ntBASIC0.69□□□□□ -2.3
Trav12-3A0A075B648 Gm22515-201ENSMUST00000158273 305 ntBASIC0.69□□□□□ -2.3
Trav12-3A0A075B648 Mir6986-201ENSMUST00000184483 58 ntBASIC0.69□□□□□ -2.3
Trav12-3A0A075B648 Gm28849-201ENSMUST00000188127 174 ntBASIC0.69□□□□□ -2.3
Trav12-3A0A075B648 Gm40331-201ENSMUST00000198430 217 ntTSL 3 BASIC0.69□□□□□ -2.3
Trav12-3A0A075B648 Gm44396-201ENSMUST00000199843 114 ntBASIC0.69□□□□□ -2.3
Trav12-3A0A075B648 Olfr454-ps1-201ENSMUST00000205206 348 ntBASIC0.69□□□□□ -2.3
Trav12-3A0A075B648 Gm44921-201ENSMUST00000205290 301 ntBASIC0.69□□□□□ -2.3
Trav12-3A0A075B648 AL590614.1-201ENSMUST00000226037 268 ntBASIC0.69□□□□□ -2.3
Trav12-3A0A075B648 AC115735.2-201ENSMUST00000227135 351 ntBASIC0.69□□□□□ -2.3
Trav12-3A0A075B648 Gm10234-201ENSMUST00000089304 60 ntAPPRIS P1 TSL 5 BASIC0.69□□□□□ -2.3
Trav12-3A0A075B648 Gm22750-201ENSMUST00000102076 103 ntBASIC0.68□□□□□ -2.3
Trav12-3A0A075B648 Gm22689-201ENSMUST00000102452 110 ntBASIC0.68□□□□□ -2.3
Trav12-3A0A075B648 Gm23665-201ENSMUST00000158054 62 ntBASIC0.68□□□□□ -2.3
Retrieved 100 of 76,532 protein–RNA pairs in 81.4 ms