Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Gm29242-201ENSMUST00000186570 457 ntTSL 5 BASIC1.53□□□□□ -2.16
H2afb2S4R1M3 Tmem167-ps2-201ENSMUST00000190251 214 ntBASIC1.53□□□□□ -2.16
H2afb2S4R1M3 Mir465d-201ENSMUST00000196314 58 ntBASIC1.53□□□□□ -2.16
H2afb2S4R1M3 Gm45907-201ENSMUST00000213023 193 ntBASIC1.53□□□□□ -2.16
H2afb2S4R1M3 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
H2afb2S4R1M3 Gm24204-201ENSMUST00000082950 107 ntBASIC1.53□□□□□ -2.16
H2afb2S4R1M3 Gm24412-201ENSMUST00000083426 109 ntBASIC1.53□□□□□ -2.16
H2afb2S4R1M3 Gm24283-201ENSMUST00000104233 107 ntBASIC1.52□□□□□ -2.17
H2afb2S4R1M3 Gm23982-201ENSMUST00000157141 106 ntBASIC1.52□□□□□ -2.17
H2afb2S4R1M3 Gm24440-201ENSMUST00000157236 63 ntBASIC1.52□□□□□ -2.17
H2afb2S4R1M3 Gm25371-201ENSMUST00000158162 101 ntBASIC1.52□□□□□ -2.17
H2afb2S4R1M3 Gm22664-201ENSMUST00000158719 105 ntBASIC1.52□□□□□ -2.17
H2afb2S4R1M3 Gm24512-201ENSMUST00000174963 65 ntBASIC1.52□□□□□ -2.17
H2afb2S4R1M3 Gm24333-201ENSMUST00000175101 84 ntBASIC1.52□□□□□ -2.17
H2afb2S4R1M3 Mir6336-201ENSMUST00000183581 130 ntBASIC1.52□□□□□ -2.17
H2afb2S4R1M3 Gm37579-201ENSMUST00000194291 142 ntBASIC1.52□□□□□ -2.17
H2afb2S4R1M3 Igkv15-102-201ENSMUST00000197885 287 ntBASIC1.52□□□□□ -2.17
H2afb2S4R1M3 AC125167.1-201ENSMUST00000198698 141 ntBASIC1.52□□□□□ -2.17
H2afb2S4R1M3 Olfr1070-ps1-201ENSMUST00000215939 388 ntBASIC1.52□□□□□ -2.17
H2afb2S4R1M3 AC122367.2-201ENSMUST00000220987 534 ntTSL 2 BASIC1.52□□□□□ -2.17
H2afb2S4R1M3 Gm5899-201ENSMUST00000071770 270 ntBASIC1.52□□□□□ -2.17
H2afb2S4R1M3 Gm24042-201ENSMUST00000083114 103 ntBASIC1.52□□□□□ -2.17
H2afb2S4R1M3 Gm26495-201ENSMUST00000083152 137 ntBASIC1.52□□□□□ -2.17
H2afb2S4R1M3 Gm10222-201ENSMUST00000088336 294 ntBASIC1.52□□□□□ -2.17
H2afb2S4R1M3 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
H2afb2S4R1M3 Gm21833-201ENSMUST00000177665 1500 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
H2afb2S4R1M3 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
H2afb2S4R1M3 Gm12143-201ENSMUST00000119666 332 ntBASIC1.51□□□□□ -2.17
H2afb2S4R1M3 Gm23718-201ENSMUST00000157350 307 ntBASIC1.51□□□□□ -2.17
H2afb2S4R1M3 Gm25643-201ENSMUST00000158874 103 ntBASIC1.51□□□□□ -2.17
H2afb2S4R1M3 Mir7241-201ENSMUST00000184532 64 ntBASIC1.51□□□□□ -2.17
H2afb2S4R1M3 Gm44962-201ENSMUST00000206460 279 ntBASIC1.51□□□□□ -2.17
H2afb2S4R1M3 Selenok-ps5-201ENSMUST00000221048 278 ntBASIC1.51□□□□□ -2.17
H2afb2S4R1M3 CT030687.1-201ENSMUST00000221854 162 ntBASIC1.51□□□□□ -2.17
H2afb2S4R1M3 Gm24615-201ENSMUST00000083268 113 ntBASIC1.51□□□□□ -2.17
H2afb2S4R1M3 Mir320-201ENSMUST00000083594 82 ntBASIC1.51□□□□□ -2.17
H2afb2S4R1M3 Olfr143-202ENSMUST00000213129 3449 ntAPPRIS ALT2 TSL 5 BASIC1.5□□□□□ -2.17
H2afb2S4R1M3 Gm22321-201ENSMUST00000157152 104 ntBASIC1.5□□□□□ -2.17
H2afb2S4R1M3 Gm26405-201ENSMUST00000158495 100 ntBASIC1.5□□□□□ -2.17
H2afb2S4R1M3 Gm24277-201ENSMUST00000158661 104 ntBASIC1.5□□□□□ -2.17
H2afb2S4R1M3 Gm22450-201ENSMUST00000179641 107 ntBASIC1.5□□□□□ -2.17
H2afb2S4R1M3 Gm25473-201ENSMUST00000180191 107 ntBASIC1.5□□□□□ -2.17
H2afb2S4R1M3 Mir7017-201ENSMUST00000184894 62 ntBASIC1.5□□□□□ -2.17
H2afb2S4R1M3 Rpl23a-ps7-201ENSMUST00000185437 460 ntBASIC1.5□□□□□ -2.17
H2afb2S4R1M3 Gm37146-201ENSMUST00000192572 463 ntTSL 3 BASIC1.5□□□□□ -2.17
H2afb2S4R1M3 Gm33866-201ENSMUST00000196911 289 ntBASIC1.5□□□□□ -2.17
H2afb2S4R1M3 Gm44409-201ENSMUST00000198810 166 ntBASIC1.5□□□□□ -2.17
H2afb2S4R1M3 Gm24625-201ENSMUST00000082622 130 ntBASIC1.5□□□□□ -2.17
H2afb2S4R1M3 Gm22299-201ENSMUST00000082663 136 ntBASIC1.5□□□□□ -2.17
H2afb2S4R1M3 Gm24856-201ENSMUST00000082809 107 ntBASIC1.5□□□□□ -2.17
H2afb2S4R1M3 Gm26071-201ENSMUST00000083261 107 ntBASIC1.5□□□□□ -2.17
H2afb2S4R1M3 Gm24521-201ENSMUST00000083958 107 ntBASIC1.5□□□□□ -2.17
H2afb2S4R1M3 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
H2afb2S4R1M3 Gm42635-201ENSMUST00000200266 2571 ntBASIC1.49□□□□□ -2.17
H2afb2S4R1M3 AC124456.1-201ENSMUST00000217391 2597 ntBASIC1.49□□□□□ -2.17
H2afb2S4R1M3 Gm22784-201ENSMUST00000104088 132 ntBASIC1.49□□□□□ -2.17
H2afb2S4R1M3 Gm23010-201ENSMUST00000104151 126 ntBASIC1.49□□□□□ -2.17
H2afb2S4R1M3 Gm12797-201ENSMUST00000118645 273 ntBASIC1.49□□□□□ -2.17
H2afb2S4R1M3 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC1.49□□□□□ -2.17
H2afb2S4R1M3 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.49□□□□□ -2.17
H2afb2S4R1M3 Gm23536-201ENSMUST00000157541 134 ntBASIC1.49□□□□□ -2.17
H2afb2S4R1M3 Rnu7-201ENSMUST00000158458 62 ntBASIC1.49□□□□□ -2.17
H2afb2S4R1M3 Ear-ps4-201ENSMUST00000166834 450 ntBASIC1.49□□□□□ -2.17
H2afb2S4R1M3 Gm22951-201ENSMUST00000179471 107 ntBASIC1.49□□□□□ -2.17
H2afb2S4R1M3 Gm28849-201ENSMUST00000188127 174 ntBASIC1.49□□□□□ -2.17
H2afb2S4R1M3 Gm28921-201ENSMUST00000190219 378 ntBASIC1.49□□□□□ -2.17
H2afb2S4R1M3 Gm28330-201ENSMUST00000190353 171 ntBASIC1.49□□□□□ -2.17
H2afb2S4R1M3 Gm44352-201ENSMUST00000196358 110 ntBASIC1.49□□□□□ -2.17
H2afb2S4R1M3 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC1.49□□□□□ -2.17
H2afb2S4R1M3 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC1.49□□□□□ -2.17
H2afb2S4R1M3 Olfr515-ps1-201ENSMUST00000208389 189 ntBASIC1.49□□□□□ -2.17
H2afb2S4R1M3 AC159896.1-201ENSMUST00000215264 215 ntBASIC1.49□□□□□ -2.17
H2afb2S4R1M3 Gm24966-201ENSMUST00000082443 79 ntBASIC1.49□□□□□ -2.17
H2afb2S4R1M3 Gm25141-201ENSMUST00000083177 107 ntBASIC1.49□□□□□ -2.17
H2afb2S4R1M3 AC164297.1-201ENSMUST00000224484 1561 ntBASIC1.49□□□□□ -2.17
H2afb2S4R1M3 Olfr136-205ENSMUST00000216963 1821 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
H2afb2S4R1M3 Defb43-201ENSMUST00000100491 408 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
H2afb2S4R1M3 Mir669g-201ENSMUST00000116809 123 ntBASIC1.48□□□□□ -2.17
H2afb2S4R1M3 Gm23492-201ENSMUST00000116837 115 ntBASIC1.48□□□□□ -2.17
H2afb2S4R1M3 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
H2afb2S4R1M3 Vmn2r-ps116-201ENSMUST00000175997 126 ntBASIC1.48□□□□□ -2.17
H2afb2S4R1M3 Gm27722-201ENSMUST00000183908 76 ntBASIC1.48□□□□□ -2.17
H2afb2S4R1M3 Sprr2h-202ENSMUST00000191886 297 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
H2afb2S4R1M3 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC1.48□□□□□ -2.17
H2afb2S4R1M3 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
H2afb2S4R1M3 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC1.48□□□□□ -2.17
H2afb2S4R1M3 AC120540.2-201ENSMUST00000221716 387 ntBASIC1.48□□□□□ -2.17
H2afb2S4R1M3 AC239878.2-201ENSMUST00000224048 464 ntBASIC1.48□□□□□ -2.17
H2afb2S4R1M3 Mir300-201ENSMUST00000083485 79 ntBASIC1.48□□□□□ -2.17
H2afb2S4R1M3 Lipi-201ENSMUST00000062721 2082 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
H2afb2S4R1M3 Olfr1450-202ENSMUST00000213587 2872 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
H2afb2S4R1M3 AL645643.1-201ENSMUST00000222438 3897 ntBASIC1.47□□□□□ -2.17
H2afb2S4R1M3 Gm22935-201ENSMUST00000103960 104 ntBASIC1.47□□□□□ -2.17
H2afb2S4R1M3 Sel1l2-201ENSMUST00000120133 579 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
H2afb2S4R1M3 Gm23048-201ENSMUST00000157237 129 ntBASIC1.47□□□□□ -2.17
H2afb2S4R1M3 Gm24909-201ENSMUST00000157290 280 ntBASIC1.47□□□□□ -2.17
H2afb2S4R1M3 Gm23558-201ENSMUST00000157823 80 ntBASIC1.47□□□□□ -2.17
H2afb2S4R1M3 Gm22963-201ENSMUST00000157960 91 ntBASIC1.47□□□□□ -2.17
H2afb2S4R1M3 Gm25333-201ENSMUST00000158035 246 ntBASIC1.47□□□□□ -2.17
H2afb2S4R1M3 Gm26287-201ENSMUST00000158887 81 ntBASIC1.47□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 214.8 ms