Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Mir6540-201ENSMUST00000184886 108 ntBASIC1.65□□□□□ -2.15
H2afb1S4R1E0 Gm37778-201ENSMUST00000191732 190 ntBASIC1.65□□□□□ -2.15
H2afb1S4R1E0 Gm37377-201ENSMUST00000191733 304 ntBASIC1.65□□□□□ -2.15
H2afb1S4R1E0 AC125167.1-201ENSMUST00000198698 141 ntBASIC1.65□□□□□ -2.15
H2afb1S4R1E0 Gm44977-201ENSMUST00000205283 420 ntBASIC1.65□□□□□ -2.15
H2afb1S4R1E0 1700015C15Rik-201ENSMUST00000221465 374 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
H2afb1S4R1E0 CT485608.2-201ENSMUST00000227210 291 ntBASIC1.65□□□□□ -2.15
H2afb1S4R1E0 Gm24625-201ENSMUST00000082622 130 ntBASIC1.65□□□□□ -2.15
H2afb1S4R1E0 Gm22358-201ENSMUST00000082877 122 ntBASIC1.65□□□□□ -2.15
H2afb1S4R1E0 Gm24615-201ENSMUST00000083268 113 ntBASIC1.65□□□□□ -2.15
H2afb1S4R1E0 Gm25188-201ENSMUST00000083913 122 ntBASIC1.65□□□□□ -2.15
H2afb1S4R1E0 Gm38255-201ENSMUST00000194910 2996 ntBASIC1.65□□□□□ -2.15
H2afb1S4R1E0 Gm26077-201ENSMUST00000104064 123 ntBASIC1.64□□□□□ -2.15
H2afb1S4R1E0 n-R5s200-201ENSMUST00000104194 113 ntBASIC1.64□□□□□ -2.15
H2afb1S4R1E0 Gm23492-201ENSMUST00000116837 115 ntBASIC1.64□□□□□ -2.15
H2afb1S4R1E0 Gm25024-201ENSMUST00000179667 104 ntBASIC1.64□□□□□ -2.15
H2afb1S4R1E0 Gm24068-201ENSMUST00000104513 132 ntBASIC1.63□□□□□ -2.15
H2afb1S4R1E0 Gm15536-201ENSMUST00000121411 114 ntBASIC1.63□□□□□ -2.15
H2afb1S4R1E0 Gm22217-201ENSMUST00000157556 313 ntBASIC1.63□□□□□ -2.15
H2afb1S4R1E0 Gm22097-201ENSMUST00000157929 278 ntBASIC1.63□□□□□ -2.15
H2afb1S4R1E0 Gm24392-201ENSMUST00000158136 103 ntBASIC1.63□□□□□ -2.15
H2afb1S4R1E0 Gm22386-201ENSMUST00000158192 129 ntBASIC1.63□□□□□ -2.15
H2afb1S4R1E0 Rnu7-201ENSMUST00000158458 62 ntBASIC1.63□□□□□ -2.15
H2afb1S4R1E0 Gm25362-201ENSMUST00000158854 105 ntBASIC1.63□□□□□ -2.15
H2afb1S4R1E0 Gm24667-201ENSMUST00000158938 103 ntBASIC1.63□□□□□ -2.15
H2afb1S4R1E0 Gm24333-201ENSMUST00000175101 84 ntBASIC1.63□□□□□ -2.15
H2afb1S4R1E0 Gm24572-201ENSMUST00000175505 88 ntBASIC1.63□□□□□ -2.15
H2afb1S4R1E0 Gm25615-201ENSMUST00000177836 94 ntBASIC1.63□□□□□ -2.15
H2afb1S4R1E0 Gm37081-201ENSMUST00000192034 196 ntBASIC1.63□□□□□ -2.15
H2afb1S4R1E0 AC122367.2-201ENSMUST00000220987 534 ntTSL 2 BASIC1.63□□□□□ -2.15
H2afb1S4R1E0 Gm22299-201ENSMUST00000082663 136 ntBASIC1.63□□□□□ -2.15
H2afb1S4R1E0 Gm24412-201ENSMUST00000083426 109 ntBASIC1.63□□□□□ -2.15
H2afb1S4R1E0 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
H2afb1S4R1E0 Lipi-201ENSMUST00000062721 2082 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
H2afb1S4R1E0 Olfr389-203ENSMUST00000215418 3417 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
H2afb1S4R1E0 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC1.62□□□□□ -2.15
H2afb1S4R1E0 Mir767-201ENSMUST00000103256 107 ntBASIC1.62□□□□□ -2.15
H2afb1S4R1E0 Gm22935-201ENSMUST00000103960 104 ntBASIC1.62□□□□□ -2.15
H2afb1S4R1E0 Gm24478-201ENSMUST00000157439 158 ntBASIC1.62□□□□□ -2.15
H2afb1S4R1E0 Gm26405-201ENSMUST00000158495 100 ntBASIC1.62□□□□□ -2.15
H2afb1S4R1E0 Gm16162-201ENSMUST00000162296 297 ntBASIC1.62□□□□□ -2.15
H2afb1S4R1E0 Mir6901-201ENSMUST00000185062 62 ntBASIC1.62□□□□□ -2.15
H2afb1S4R1E0 Mir7678-201ENSMUST00000185076 71 ntBASIC1.62□□□□□ -2.15
H2afb1S4R1E0 Gm19123-201ENSMUST00000190716 651 ntBASIC1.62□□□□□ -2.15
H2afb1S4R1E0 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC1.62□□□□□ -2.15
H2afb1S4R1E0 Olfr375-ps1-201ENSMUST00000198131 249 ntBASIC1.62□□□□□ -2.15
H2afb1S4R1E0 AC173482.5-201ENSMUST00000224181 327 ntBASIC1.62□□□□□ -2.15
H2afb1S4R1E0 Gm25204-201ENSMUST00000082843 106 ntBASIC1.62□□□□□ -2.15
H2afb1S4R1E0 Mir151-201ENSMUST00000083678 68 ntBASIC1.62□□□□□ -2.15
H2afb1S4R1E0 AC124456.1-201ENSMUST00000217391 2597 ntBASIC1.61□□□□□ -2.15
H2afb1S4R1E0 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
H2afb1S4R1E0 Olfr948-202ENSMUST00000216132 4164 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
H2afb1S4R1E0 Gm11471-201ENSMUST00000121824 198 ntBASIC1.61□□□□□ -2.15
H2afb1S4R1E0 Gm14846-201ENSMUST00000121868 216 ntBASIC1.61□□□□□ -2.15
H2afb1S4R1E0 Gm23182-201ENSMUST00000158688 135 ntBASIC1.61□□□□□ -2.15
H2afb1S4R1E0 Gm25994-201ENSMUST00000175392 101 ntBASIC1.61□□□□□ -2.15
H2afb1S4R1E0 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
H2afb1S4R1E0 Gm43563-201ENSMUST00000196761 198 ntBASIC1.61□□□□□ -2.15
H2afb1S4R1E0 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
H2afb1S4R1E0 Gm23705-201ENSMUST00000104370 130 ntBASIC1.6□□□□□ -2.15
H2afb1S4R1E0 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
H2afb1S4R1E0 Gm12865-201ENSMUST00000137353 326 ntTSL 2 BASIC1.6□□□□□ -2.15
H2afb1S4R1E0 Trav20-201ENSMUST00000142754 347 ntBASIC1.6□□□□□ -2.15
H2afb1S4R1E0 Mir1949-201ENSMUST00000157434 141 ntBASIC1.6□□□□□ -2.15
H2afb1S4R1E0 Gm27579-201ENSMUST00000158113 63 ntBASIC1.6□□□□□ -2.15
H2afb1S4R1E0 Gm26022-201ENSMUST00000158663 108 ntBASIC1.6□□□□□ -2.15
H2afb1S4R1E0 Gm25491-201ENSMUST00000158733 308 ntBASIC1.6□□□□□ -2.15
H2afb1S4R1E0 Gm26426-201ENSMUST00000177866 123 ntBASIC1.6□□□□□ -2.15
H2afb1S4R1E0 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
H2afb1S4R1E0 Gm26060-201ENSMUST00000180094 123 ntBASIC1.6□□□□□ -2.15
H2afb1S4R1E0 Gm29657-201ENSMUST00000189807 342 ntBASIC1.6□□□□□ -2.15
H2afb1S4R1E0 Gm37586-201ENSMUST00000193654 204 ntBASIC1.6□□□□□ -2.15
H2afb1S4R1E0 Gm33866-201ENSMUST00000196911 289 ntBASIC1.6□□□□□ -2.15
H2afb1S4R1E0 Gm42774-201ENSMUST00000198854 283 ntBASIC1.6□□□□□ -2.15
H2afb1S4R1E0 Gm25376-201ENSMUST00000104340 133 ntBASIC1.59□□□□□ -2.15
H2afb1S4R1E0 Gm12512-201ENSMUST00000119620 217 ntBASIC1.59□□□□□ -2.15
H2afb1S4R1E0 Gm12801-201ENSMUST00000153228 263 ntTSL 3 BASIC1.59□□□□□ -2.15
H2afb1S4R1E0 Gm23718-201ENSMUST00000157350 307 ntBASIC1.59□□□□□ -2.15
H2afb1S4R1E0 Gm25720-201ENSMUST00000157503 105 ntBASIC1.59□□□□□ -2.15
H2afb1S4R1E0 Gm23181-201ENSMUST00000158685 110 ntBASIC1.59□□□□□ -2.15
H2afb1S4R1E0 Gm22666-201ENSMUST00000158717 164 ntBASIC1.59□□□□□ -2.15
H2afb1S4R1E0 Gm23047-201ENSMUST00000177661 94 ntBASIC1.59□□□□□ -2.15
H2afb1S4R1E0 Gm23963-201ENSMUST00000179603 77 ntBASIC1.59□□□□□ -2.15
H2afb1S4R1E0 Gm29022-201ENSMUST00000190702 225 ntBASIC1.59□□□□□ -2.15
H2afb1S4R1E0 Ighv12-2-201ENSMUST00000191949 362 ntBASIC1.59□□□□□ -2.15
H2afb1S4R1E0 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC1.59□□□□□ -2.15
H2afb1S4R1E0 Gm44384-201ENSMUST00000200208 114 ntBASIC1.59□□□□□ -2.15
H2afb1S4R1E0 Eif4e-206ENSMUST00000200239 526 ntTSL 5 BASIC1.59□□□□□ -2.15
H2afb1S4R1E0 Gm45456-201ENSMUST00000210841 243 ntBASIC1.59□□□□□ -2.15
H2afb1S4R1E0 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC1.59□□□□□ -2.15
H2afb1S4R1E0 Mir374b-201ENSMUST00000102314 95 ntBASIC1.58□□□□□ -2.16
H2afb1S4R1E0 Gm22195-201ENSMUST00000116861 108 ntBASIC1.58□□□□□ -2.16
H2afb1S4R1E0 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC1.58□□□□□ -2.16
H2afb1S4R1E0 Gm24006-201ENSMUST00000158462 132 ntBASIC1.58□□□□□ -2.16
H2afb1S4R1E0 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC1.58□□□□□ -2.16
H2afb1S4R1E0 Gm9156-201ENSMUST00000189660 463 ntBASIC1.58□□□□□ -2.16
H2afb1S4R1E0 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
H2afb1S4R1E0 AC132615.1-201ENSMUST00000213873 255 ntBASIC1.58□□□□□ -2.16
H2afb1S4R1E0 Gm22248-201ENSMUST00000082482 150 ntBASIC1.58□□□□□ -2.16
H2afb1S4R1E0 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
Retrieved 100 of 76,532 protein–RNA pairs in 168.6 ms