Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm29037-201ENSMUST00000189092 313 ntBASIC1.34□□□□□ -2.19
Trim3Q9R1R2 Gm37313-201ENSMUST00000191673 290 ntBASIC1.34□□□□□ -2.19
Trim3Q9R1R2 Gm37404-201ENSMUST00000195726 359 ntBASIC1.34□□□□□ -2.19
Trim3Q9R1R2 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
Trim3Q9R1R2 AC125167.1-201ENSMUST00000198698 141 ntBASIC1.34□□□□□ -2.19
Trim3Q9R1R2 Gm43884-201ENSMUST00000204251 559 ntBASIC1.34□□□□□ -2.19
Trim3Q9R1R2 Gm45543-201ENSMUST00000209327 88 ntBASIC1.34□□□□□ -2.19
Trim3Q9R1R2 AC152414.2-201ENSMUST00000219620 537 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
Trim3Q9R1R2 AC109214.2-201ENSMUST00000220089 358 ntBASIC1.34□□□□□ -2.19
Trim3Q9R1R2 AC154747.1-201ENSMUST00000225265 239 ntBASIC1.34□□□□□ -2.19
Trim3Q9R1R2 Gm22294-201ENSMUST00000083308 104 ntBASIC1.34□□□□□ -2.19
Trim3Q9R1R2 Mir92-2-201ENSMUST00000083679 91 ntBASIC1.34□□□□□ -2.19
Trim3Q9R1R2 AC153964.2-201ENSMUST00000217704 2474 ntBASIC1.33□□□□□ -2.2
Trim3Q9R1R2 Olfr821-203ENSMUST00000214177 1929 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
Trim3Q9R1R2 Gm15002-201ENSMUST00000118406 452 ntBASIC1.33□□□□□ -2.2
Trim3Q9R1R2 n-R5s150-201ENSMUST00000122705 108 ntBASIC1.33□□□□□ -2.2
Trim3Q9R1R2 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC1.33□□□□□ -2.2
Trim3Q9R1R2 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC1.33□□□□□ -2.2
Trim3Q9R1R2 Gm7958-201ENSMUST00000178255 468 ntBASIC1.33□□□□□ -2.2
Trim3Q9R1R2 Gm7950-201ENSMUST00000179633 468 ntBASIC1.33□□□□□ -2.2
Trim3Q9R1R2 Mir376a-201ENSMUST00000197584 68 ntBASIC1.33□□□□□ -2.2
Trim3Q9R1R2 Klk1b28-ps-201ENSMUST00000206374 217 ntBASIC1.33□□□□□ -2.2
Trim3Q9R1R2 Gm24765-201ENSMUST00000083691 103 ntBASIC1.33□□□□□ -2.2
Trim3Q9R1R2 Gm24116-201ENSMUST00000103975 107 ntBASIC1.32□□□□□ -2.2
Trim3Q9R1R2 Gm25781-201ENSMUST00000122527 84 ntBASIC1.32□□□□□ -2.2
Trim3Q9R1R2 Gm24629-201ENSMUST00000122762 89 ntBASIC1.32□□□□□ -2.2
Trim3Q9R1R2 Gm22814-201ENSMUST00000157452 104 ntBASIC1.32□□□□□ -2.2
Trim3Q9R1R2 Gm23208-201ENSMUST00000158666 127 ntBASIC1.32□□□□□ -2.2
Trim3Q9R1R2 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC1.32□□□□□ -2.2
Trim3Q9R1R2 Gm27421-201ENSMUST00000184729 167 ntBASIC1.32□□□□□ -2.2
Trim3Q9R1R2 Gm28794-201ENSMUST00000185276 136 ntBASIC1.32□□□□□ -2.2
Trim3Q9R1R2 Gm29235-201ENSMUST00000185786 442 ntTSL 5 BASIC1.32□□□□□ -2.2
Trim3Q9R1R2 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC1.32□□□□□ -2.2
Trim3Q9R1R2 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
Trim3Q9R1R2 Gm25135-201ENSMUST00000082648 143 ntBASIC1.32□□□□□ -2.2
Trim3Q9R1R2 Gm25759-201ENSMUST00000103988 129 ntBASIC1.31□□□□□ -2.2
Trim3Q9R1R2 Gm23759-201ENSMUST00000158351 268 ntBASIC1.31□□□□□ -2.2
Trim3Q9R1R2 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC1.31□□□□□ -2.2
Trim3Q9R1R2 Gm24366-201ENSMUST00000175383 86 ntBASIC1.31□□□□□ -2.2
Trim3Q9R1R2 Gm25636-201ENSMUST00000082666 133 ntBASIC1.31□□□□□ -2.2
Trim3Q9R1R2 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
Trim3Q9R1R2 Gm14761-201ENSMUST00000121363 262 ntBASIC1.3□□□□□ -2.2
Trim3Q9R1R2 Gm28418-201ENSMUST00000186179 423 ntBASIC1.3□□□□□ -2.2
Trim3Q9R1R2 Gm21064-202ENSMUST00000190583 278 ntBASIC1.3□□□□□ -2.2
Trim3Q9R1R2 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC1.3□□□□□ -2.2
Trim3Q9R1R2 AC132437.1-201ENSMUST00000218308 320 ntBASIC1.3□□□□□ -2.2
Trim3Q9R1R2 AC163033.1-201ENSMUST00000218608 157 ntBASIC1.3□□□□□ -2.2
Trim3Q9R1R2 AC116589.4-201ENSMUST00000222390 216 ntBASIC1.3□□□□□ -2.2
Trim3Q9R1R2 Snord14a-201ENSMUST00000082807 87 ntBASIC1.3□□□□□ -2.2
Trim3Q9R1R2 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC1.3□□□□□ -2.2
Trim3Q9R1R2 Gm23122-201ENSMUST00000157645 103 ntBASIC1.29□□□□□ -2.2
Trim3Q9R1R2 Traj60-201ENSMUST00000167781 54 ntBASIC1.29□□□□□ -2.2
Trim3Q9R1R2 Gm26914-201ENSMUST00000182262 223 ntBASIC1.29□□□□□ -2.2
Trim3Q9R1R2 Gm27711-201ENSMUST00000183802 118 ntBASIC1.29□□□□□ -2.2
Trim3Q9R1R2 Gm29147-201ENSMUST00000186846 315 ntBASIC1.29□□□□□ -2.2
Trim3Q9R1R2 Gm29227-201ENSMUST00000187139 315 ntBASIC1.29□□□□□ -2.2
Trim3Q9R1R2 Gm29034-201ENSMUST00000188099 315 ntBASIC1.29□□□□□ -2.2
Trim3Q9R1R2 Gm28160-201ENSMUST00000191229 315 ntBASIC1.29□□□□□ -2.2
Trim3Q9R1R2 Gm37146-201ENSMUST00000192572 463 ntTSL 3 BASIC1.29□□□□□ -2.2
Trim3Q9R1R2 Gm37129-201ENSMUST00000195791 315 ntBASIC1.29□□□□□ -2.2
Trim3Q9R1R2 AC145736.2-201ENSMUST00000216305 365 ntBASIC1.29□□□□□ -2.2
Trim3Q9R1R2 Gm26111-201ENSMUST00000083969 106 ntBASIC1.29□□□□□ -2.2
Trim3Q9R1R2 Gm24164-201ENSMUST00000093663 104 ntBASIC1.29□□□□□ -2.2
Trim3Q9R1R2 Gm22663-201ENSMUST00000158721 102 ntBASIC1.28□□□□□ -2.2
Trim3Q9R1R2 4930598A11Rik-201ENSMUST00000180742 628 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
Trim3Q9R1R2 Gm19123-201ENSMUST00000190716 651 ntBASIC1.28□□□□□ -2.2
Trim3Q9R1R2 Gm25513-201ENSMUST00000083861 162 ntBASIC1.28□□□□□ -2.2
Trim3Q9R1R2 CT030170.3-201ENSMUST00000221205 1815 ntBASIC1.28□□□□□ -2.2
Trim3Q9R1R2 Olfr921-202ENSMUST00000213958 4012 ntAPPRIS P1 TSL 2 BASIC1.28□□□□□ -2.21
Trim3Q9R1R2 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC1.28□□□□□ -2.21
Trim3Q9R1R2 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
Trim3Q9R1R2 Vmn1r-ps125-201ENSMUST00000117767 290 ntBASIC1.27□□□□□ -2.21
Trim3Q9R1R2 Gm13967-201ENSMUST00000120404 380 ntBASIC1.27□□□□□ -2.21
Trim3Q9R1R2 Gm25423-201ENSMUST00000157609 107 ntBASIC1.27□□□□□ -2.21
Trim3Q9R1R2 Gm29661-201ENSMUST00000186781 315 ntBASIC1.27□□□□□ -2.21
Trim3Q9R1R2 Gm29308-201ENSMUST00000188863 315 ntBASIC1.27□□□□□ -2.21
Trim3Q9R1R2 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC1.27□□□□□ -2.21
Trim3Q9R1R2 Gm19855-201ENSMUST00000210145 249 ntBASIC1.27□□□□□ -2.21
Trim3Q9R1R2 Olfr1070-ps1-201ENSMUST00000215939 388 ntBASIC1.27□□□□□ -2.21
Trim3Q9R1R2 Gm10092-201ENSMUST00000077110 180 ntBASIC1.27□□□□□ -2.21
Trim3Q9R1R2 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
Trim3Q9R1R2 Gm26339-201ENSMUST00000102368 99 ntBASIC1.26□□□□□ -2.21
Trim3Q9R1R2 Gm24283-201ENSMUST00000104233 107 ntBASIC1.26□□□□□ -2.21
Trim3Q9R1R2 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC1.26□□□□□ -2.21
Trim3Q9R1R2 Gm26049-201ENSMUST00000157313 108 ntBASIC1.26□□□□□ -2.21
Trim3Q9R1R2 Mir5624-201ENSMUST00000176635 61 ntBASIC1.26□□□□□ -2.21
Trim3Q9R1R2 Gm28110-201ENSMUST00000185782 315 ntBASIC1.26□□□□□ -2.21
Trim3Q9R1R2 Gm29057-201ENSMUST00000186468 315 ntBASIC1.26□□□□□ -2.21
Trim3Q9R1R2 Gm28737-201ENSMUST00000186808 315 ntBASIC1.26□□□□□ -2.21
Trim3Q9R1R2 Gm29118-201ENSMUST00000186908 315 ntBASIC1.26□□□□□ -2.21
Trim3Q9R1R2 Gm28433-201ENSMUST00000187085 315 ntBASIC1.26□□□□□ -2.21
Trim3Q9R1R2 Gm28759-201ENSMUST00000187621 315 ntBASIC1.26□□□□□ -2.21
Trim3Q9R1R2 Gm28831-201ENSMUST00000187739 315 ntBASIC1.26□□□□□ -2.21
Trim3Q9R1R2 Gm28200-201ENSMUST00000187778 315 ntBASIC1.26□□□□□ -2.21
Trim3Q9R1R2 Gm28752-201ENSMUST00000188340 315 ntBASIC1.26□□□□□ -2.21
Trim3Q9R1R2 Gm29378-201ENSMUST00000188723 315 ntBASIC1.26□□□□□ -2.21
Trim3Q9R1R2 Gm28569-201ENSMUST00000188748 315 ntBASIC1.26□□□□□ -2.21
Trim3Q9R1R2 Gm28120-201ENSMUST00000188812 315 ntBASIC1.26□□□□□ -2.21
Trim3Q9R1R2 Gm28369-201ENSMUST00000188993 315 ntBASIC1.26□□□□□ -2.21
Trim3Q9R1R2 Gm28537-201ENSMUST00000189026 315 ntBASIC1.26□□□□□ -2.21
Retrieved 100 of 76,532 protein–RNA pairs in 182.1 ms