Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Gm6325-201ENSMUST00000122015 3114 ntBASIC3.42□□□□□ -1.86
Nubp1Q9R060 Olfr1442-204ENSMUST00000208657 3148 ntAPPRIS P1 TSL 3 BASIC3.41□□□□□ -1.86
Nubp1Q9R060 Olfr124-203ENSMUST00000216478 4416 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Nubp1Q9R060 AC124456.1-201ENSMUST00000217391 2597 ntBASIC3.41□□□□□ -1.86
Nubp1Q9R060 Gm42446-201ENSMUST00000199783 3284 ntBASIC3.41□□□□□ -1.86
Nubp1Q9R060 Gm25376-201ENSMUST00000104340 133 ntBASIC3.41□□□□□ -1.86
Nubp1Q9R060 Gm16355-201ENSMUST00000128606 231 ntBASIC3.41□□□□□ -1.86
Nubp1Q9R060 Gm26415-201ENSMUST00000157673 292 ntBASIC3.41□□□□□ -1.86
Nubp1Q9R060 Mir1931-201ENSMUST00000158589 119 ntBASIC3.41□□□□□ -1.86
Nubp1Q9R060 Rpl31-ps15-201ENSMUST00000181857 375 ntBASIC3.41□□□□□ -1.86
Nubp1Q9R060 Mir6938-201ENSMUST00000184173 63 ntBASIC3.41□□□□□ -1.86
Nubp1Q9R060 Gm27392-201ENSMUST00000185041 101 ntBASIC3.41□□□□□ -1.86
Nubp1Q9R060 Gm44600-201ENSMUST00000208540 111 ntBASIC3.41□□□□□ -1.86
Nubp1Q9R060 Gm26326-201ENSMUST00000083070 129 ntBASIC3.41□□□□□ -1.86
Nubp1Q9R060 Nlrp9a-202ENSMUST00000108387 3336 ntAPPRIS P4 TSL 1 (best) BASIC3.41□□□□□ -1.86
Nubp1Q9R060 Olfr1484-205ENSMUST00000216369 3764 ntTSL 5 BASIC3.41□□□□□ -1.86
Nubp1Q9R060 Arrdc3-201ENSMUST00000099356 4101 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Nubp1Q9R060 Gm11598-201ENSMUST00000119257 357 ntBASIC3.4□□□□□ -1.87
Nubp1Q9R060 Gm11704-201ENSMUST00000120031 214 ntBASIC3.4□□□□□ -1.87
Nubp1Q9R060 Gm22279-201ENSMUST00000157200 93 ntBASIC3.4□□□□□ -1.87
Nubp1Q9R060 Gm25436-201ENSMUST00000158275 145 ntBASIC3.4□□□□□ -1.87
Nubp1Q9R060 Gm24739-201ENSMUST00000158855 292 ntBASIC3.4□□□□□ -1.87
Nubp1Q9R060 Gm6788-201ENSMUST00000166459 270 ntBASIC3.4□□□□□ -1.87
Nubp1Q9R060 Mir3094-201ENSMUST00000175121 64 ntBASIC3.4□□□□□ -1.87
Nubp1Q9R060 Gm24572-201ENSMUST00000175505 88 ntBASIC3.4□□□□□ -1.87
Nubp1Q9R060 Mir7014-201ENSMUST00000183853 63 ntBASIC3.4□□□□□ -1.87
Nubp1Q9R060 1700027F06Rik-201ENSMUST00000203901 243 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Nubp1Q9R060 AC138401.2-201ENSMUST00000220461 365 ntBASIC3.4□□□□□ -1.87
Nubp1Q9R060 Mir370-201ENSMUST00000083499 79 ntBASIC3.4□□□□□ -1.87
Nubp1Q9R060 n-R5s151-201ENSMUST00000083959 119 ntBASIC3.4□□□□□ -1.87
Nubp1Q9R060 Erbin-205ENSMUST00000188997 5084 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
Nubp1Q9R060 Zfp813-ps-201ENSMUST00000186652 2506 ntBASIC3.4□□□□□ -1.87
Nubp1Q9R060 Erbb4-201ENSMUST00000119142 11782 ntAPPRIS ALT1 TSL 5 BASIC3.39□□□□□ -1.87
Nubp1Q9R060 Olfr577-202ENSMUST00000214080 3282 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Nubp1Q9R060 Gm23652-201ENSMUST00000116752 107 ntBASIC3.39□□□□□ -1.87
Nubp1Q9R060 Gm11640-201ENSMUST00000155987 272 ntTSL 3 BASIC3.39□□□□□ -1.87
Nubp1Q9R060 Gm22731-201ENSMUST00000158086 94 ntBASIC3.39□□□□□ -1.87
Nubp1Q9R060 Mir6377-201ENSMUST00000183760 114 ntBASIC3.39□□□□□ -1.87
Nubp1Q9R060 AC124687.1-201ENSMUST00000221868 189 ntBASIC3.39□□□□□ -1.87
Nubp1Q9R060 AC168056.1-201ENSMUST00000225270 180 ntBASIC3.39□□□□□ -1.87
Nubp1Q9R060 mt-Ts2-201ENSMUST00000082416 59 ntBASIC3.39□□□□□ -1.87
Nubp1Q9R060 Gm24038-201ENSMUST00000082872 159 ntBASIC3.39□□□□□ -1.87
Nubp1Q9R060 AC126033.1-201ENSMUST00000227628 6773 ntBASIC3.39□□□□□ -1.87
Nubp1Q9R060 Mir291a-201ENSMUST00000104815 82 ntBASIC3.38□□□□□ -1.87
Nubp1Q9R060 Gm24627-201ENSMUST00000122764 138 ntBASIC3.38□□□□□ -1.87
Nubp1Q9R060 Gm25289-201ENSMUST00000122799 119 ntBASIC3.38□□□□□ -1.87
Nubp1Q9R060 Mir1934-201ENSMUST00000158127 83 ntBASIC3.38□□□□□ -1.87
Nubp1Q9R060 Gm22638-201ENSMUST00000179674 107 ntBASIC3.38□□□□□ -1.87
Nubp1Q9R060 Gm28282-201ENSMUST00000186072 186 ntBASIC3.38□□□□□ -1.87
Nubp1Q9R060 Gm32381-201ENSMUST00000203192 476 ntBASIC3.38□□□□□ -1.87
Nubp1Q9R060 Olfr1485-ps1-201ENSMUST00000208420 370 ntBASIC3.38□□□□□ -1.87
Nubp1Q9R060 AC132465.3-201ENSMUST00000219326 195 ntBASIC3.38□□□□□ -1.87
Nubp1Q9R060 Gm25200-201ENSMUST00000083094 130 ntBASIC3.38□□□□□ -1.87
Nubp1Q9R060 Gm23297-201ENSMUST00000083184 127 ntBASIC3.38□□□□□ -1.87
Nubp1Q9R060 Csmd3-204ENSMUST00000160658 12460 ntTSL 5 BASIC3.38□□□□□ -1.87
Nubp1Q9R060 Olfr1183-203ENSMUST00000219871 8353 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Nubp1Q9R060 Themis-201ENSMUST00000056097 5082 ntAPPRIS P2 TSL 1 (best) BASIC3.37□□□□□ -1.87
Nubp1Q9R060 Gm12128-201ENSMUST00000131013 2914 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Nubp1Q9R060 Gm1980-201ENSMUST00000123131 2306 ntBASIC3.37□□□□□ -1.87
Nubp1Q9R060 Gm23532-201ENSMUST00000104569 112 ntBASIC3.37□□□□□ -1.87
Nubp1Q9R060 Gm26105-201ENSMUST00000157253 190 ntBASIC3.37□□□□□ -1.87
Nubp1Q9R060 Gm23190-201ENSMUST00000180307 64 ntBASIC3.37□□□□□ -1.87
Nubp1Q9R060 Ptma-ps1-201ENSMUST00000181079 309 ntBASIC3.37□□□□□ -1.87
Nubp1Q9R060 Mir6353-201ENSMUST00000183596 113 ntBASIC3.37□□□□□ -1.87
Nubp1Q9R060 Mir3961-201ENSMUST00000198795 59 ntBASIC3.37□□□□□ -1.87
Nubp1Q9R060 Gm42684-201ENSMUST00000197663 3615 ntBASIC3.37□□□□□ -1.87
Nubp1Q9R060 AC152162.1-201ENSMUST00000225910 2917 ntBASIC3.37□□□□□ -1.87
Nubp1Q9R060 Ddx60-201ENSMUST00000070631 6535 ntAPPRIS P2 TSL 5 BASIC3.37□□□□□ -1.87
Nubp1Q9R060 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Nubp1Q9R060 Vmn1r80-202ENSMUST00000227205 10892 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Nubp1Q9R060 Zfp979-201ENSMUST00000037565 2558 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
Nubp1Q9R060 n-R5s68-201ENSMUST00000122639 82 ntBASIC3.36□□□□□ -1.87
Nubp1Q9R060 Gm22535-201ENSMUST00000158174 119 ntBASIC3.36□□□□□ -1.87
Nubp1Q9R060 Gm25835-201ENSMUST00000158917 144 ntBASIC3.36□□□□□ -1.87
Nubp1Q9R060 Snord50a-201ENSMUST00000178154 72 ntBASIC3.36□□□□□ -1.87
Nubp1Q9R060 Gm24463-201ENSMUST00000178417 72 ntBASIC3.36□□□□□ -1.87
Nubp1Q9R060 Gm27379-201ENSMUST00000183730 123 ntBASIC3.36□□□□□ -1.87
Nubp1Q9R060 Gm36929-201ENSMUST00000195152 166 ntTSL 5 BASIC3.36□□□□□ -1.87
Nubp1Q9R060 Igkv4-60-201ENSMUST00000200639 358 ntBASIC3.36□□□□□ -1.87
Nubp1Q9R060 Gm18346-201ENSMUST00000216782 325 ntBASIC3.36□□□□□ -1.87
Nubp1Q9R060 Gm23738-201ENSMUST00000082828 171 ntBASIC3.36□□□□□ -1.87
Nubp1Q9R060 Dst-203ENSMUST00000115104 23279 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
Nubp1Q9R060 Vmn1r51-207ENSMUST00000227766 4218 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Nubp1Q9R060 Vmn1r46-204ENSMUST00000228231 13338 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Nubp1Q9R060 Trav12d-2-201ENSMUST00000103593 341 ntAPPRIS ALT2 BASIC3.35□□□□□ -1.87
Nubp1Q9R060 Trav12n-2-201ENSMUST00000103619 341 ntAPPRIS ALT2 BASIC3.35□□□□□ -1.87
Nubp1Q9R060 Gm25765-201ENSMUST00000104100 132 ntBASIC3.35□□□□□ -1.87
Nubp1Q9R060 Gm23609-201ENSMUST00000104542 127 ntBASIC3.35□□□□□ -1.87
Nubp1Q9R060 Gm13268-201ENSMUST00000117485 433 ntBASIC3.35□□□□□ -1.87
Nubp1Q9R060 Rpl36a-ps3-201ENSMUST00000120093 321 ntBASIC3.35□□□□□ -1.87
Nubp1Q9R060 Gm25884-201ENSMUST00000157782 62 ntBASIC3.35□□□□□ -1.87
Nubp1Q9R060 Gm22069-201ENSMUST00000179911 107 ntBASIC3.35□□□□□ -1.87
Nubp1Q9R060 Olfr865-ps1-201ENSMUST00000212071 85 ntBASIC3.35□□□□□ -1.87
Nubp1Q9R060 Gm23507-201ENSMUST00000083078 107 ntBASIC3.35□□□□□ -1.87
Nubp1Q9R060 Gm25481-201ENSMUST00000083221 158 ntBASIC3.35□□□□□ -1.87
Nubp1Q9R060 Snora33-201ENSMUST00000093556 129 ntBASIC3.35□□□□□ -1.87
Nubp1Q9R060 Gm42801-201ENSMUST00000202562 2865 ntBASIC3.35□□□□□ -1.87
Nubp1Q9R060 Olfr681-204ENSMUST00000215564 4487 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Nubp1Q9R060 Olfr1206-202ENSMUST00000216950 3303 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Nubp1Q9R060 Olfr1369-ps1-202ENSMUST00000213326 3707 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 83.1 ms