Protein–RNA interactions for Protein: Q9QXK7

Cpsf3, Cleavage and polyadenylation specificity factor subunit 3, mousemouse

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf3Q9QXK7 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC1.75□□□□□ -2.13
Cpsf3Q9QXK7 Selenok-ps5-201ENSMUST00000221048 278 ntBASIC1.75□□□□□ -2.13
Cpsf3Q9QXK7 4921511C20Rik-201ENSMUST00000051530 1606 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
Cpsf3Q9QXK7 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
Cpsf3Q9QXK7 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
Cpsf3Q9QXK7 Gm22935-201ENSMUST00000103960 104 ntBASIC1.74□□□□□ -2.13
Cpsf3Q9QXK7 Gm25377-201ENSMUST00000104334 129 ntBASIC1.74□□□□□ -2.13
Cpsf3Q9QXK7 Gm15213-201ENSMUST00000122098 216 ntBASIC1.74□□□□□ -2.13
Cpsf3Q9QXK7 Gm23579-201ENSMUST00000158528 103 ntBASIC1.74□□□□□ -2.13
Cpsf3Q9QXK7 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
Cpsf3Q9QXK7 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
Cpsf3Q9QXK7 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
Cpsf3Q9QXK7 Gm15861-201ENSMUST00000120979 339 ntBASIC1.73□□□□□ -2.13
Cpsf3Q9QXK7 Gm22883-201ENSMUST00000157376 106 ntBASIC1.73□□□□□ -2.13
Cpsf3Q9QXK7 Gm25371-201ENSMUST00000158162 101 ntBASIC1.73□□□□□ -2.13
Cpsf3Q9QXK7 Gm22075-201ENSMUST00000158599 192 ntBASIC1.73□□□□□ -2.13
Cpsf3Q9QXK7 Gm25035-201ENSMUST00000175414 77 ntBASIC1.73□□□□□ -2.13
Cpsf3Q9QXK7 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC1.73□□□□□ -2.13
Cpsf3Q9QXK7 Gm45907-201ENSMUST00000213023 193 ntBASIC1.73□□□□□ -2.13
Cpsf3Q9QXK7 Olfr1070-ps1-201ENSMUST00000215939 388 ntBASIC1.73□□□□□ -2.13
Cpsf3Q9QXK7 AC129202.1-201ENSMUST00000224895 526 ntBASIC1.73□□□□□ -2.13
Cpsf3Q9QXK7 AC115735.2-201ENSMUST00000227135 351 ntBASIC1.73□□□□□ -2.13
Cpsf3Q9QXK7 Gm24406-201ENSMUST00000083026 128 ntBASIC1.73□□□□□ -2.13
Cpsf3Q9QXK7 AC133934.2-201ENSMUST00000221729 4129 ntBASIC1.73□□□□□ -2.13
Cpsf3Q9QXK7 Olfr1225-203ENSMUST00000217054 5517 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
Cpsf3Q9QXK7 Gm12837-201ENSMUST00000120131 373 ntBASIC1.72□□□□□ -2.13
Cpsf3Q9QXK7 Gm24851-201ENSMUST00000158028 103 ntBASIC1.72□□□□□ -2.13
Cpsf3Q9QXK7 Gm25333-201ENSMUST00000158035 246 ntBASIC1.72□□□□□ -2.13
Cpsf3Q9QXK7 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
Cpsf3Q9QXK7 AC239878.2-201ENSMUST00000224048 464 ntBASIC1.72□□□□□ -2.13
Cpsf3Q9QXK7 Gm26447-201ENSMUST00000082448 129 ntBASIC1.72□□□□□ -2.13
Cpsf3Q9QXK7 Gm25357-201ENSMUST00000082745 72 ntBASIC1.72□□□□□ -2.13
Cpsf3Q9QXK7 Gm24805-201ENSMUST00000082931 104 ntBASIC1.72□□□□□ -2.13
Cpsf3Q9QXK7 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC1.71□□□□□ -2.14
Cpsf3Q9QXK7 Gm24283-201ENSMUST00000104233 107 ntBASIC1.71□□□□□ -2.14
Cpsf3Q9QXK7 n-R5s150-201ENSMUST00000122705 108 ntBASIC1.71□□□□□ -2.14
Cpsf3Q9QXK7 Gm24174-201ENSMUST00000158933 111 ntBASIC1.71□□□□□ -2.14
Cpsf3Q9QXK7 Gm20923-201ENSMUST00000190009 319 ntBASIC1.71□□□□□ -2.14
Cpsf3Q9QXK7 Gm21088-201ENSMUST00000190875 316 ntBASIC1.71□□□□□ -2.14
Cpsf3Q9QXK7 Mir465d-201ENSMUST00000196314 58 ntBASIC1.71□□□□□ -2.14
Cpsf3Q9QXK7 AC168056.1-201ENSMUST00000225270 180 ntBASIC1.71□□□□□ -2.14
Cpsf3Q9QXK7 Mir320-201ENSMUST00000083594 82 ntBASIC1.71□□□□□ -2.14
Cpsf3Q9QXK7 AC154515.1-201ENSMUST00000226085 2841 ntBASIC1.71□□□□□ -2.14
Cpsf3Q9QXK7 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
Cpsf3Q9QXK7 Gm22603-201ENSMUST00000157603 96 ntBASIC1.7□□□□□ -2.14
Cpsf3Q9QXK7 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
Cpsf3Q9QXK7 Gm24638-201ENSMUST00000179807 132 ntBASIC1.7□□□□□ -2.14
Cpsf3Q9QXK7 AC125167.1-201ENSMUST00000198698 141 ntBASIC1.7□□□□□ -2.14
Cpsf3Q9QXK7 Gm44384-201ENSMUST00000200208 114 ntBASIC1.7□□□□□ -2.14
Cpsf3Q9QXK7 Olfr454-ps1-201ENSMUST00000205206 348 ntBASIC1.7□□□□□ -2.14
Cpsf3Q9QXK7 Gm5010-201ENSMUST00000213131 260 ntBASIC1.7□□□□□ -2.14
Cpsf3Q9QXK7 AC127371.3-201ENSMUST00000228129 415 ntBASIC1.7□□□□□ -2.14
Cpsf3Q9QXK7 Gm10092-201ENSMUST00000077110 180 ntBASIC1.7□□□□□ -2.14
Cpsf3Q9QXK7 Gm24164-201ENSMUST00000093663 104 ntBASIC1.7□□□□□ -2.14
Cpsf3Q9QXK7 Gm10509-201ENSMUST00000097384 259 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
Cpsf3Q9QXK7 Olfr1450-202ENSMUST00000213587 2872 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
Cpsf3Q9QXK7 Gm12512-201ENSMUST00000119620 217 ntBASIC1.69□□□□□ -2.14
Cpsf3Q9QXK7 Gm22027-201ENSMUST00000122737 127 ntBASIC1.69□□□□□ -2.14
Cpsf3Q9QXK7 Gm23640-201ENSMUST00000157860 104 ntBASIC1.69□□□□□ -2.14
Cpsf3Q9QXK7 Gm28330-201ENSMUST00000190353 171 ntBASIC1.69□□□□□ -2.14
Cpsf3Q9QXK7 Gm38060-201ENSMUST00000194822 464 ntBASIC1.69□□□□□ -2.14
Cpsf3Q9QXK7 Gm24460-201ENSMUST00000082731 106 ntBASIC1.69□□□□□ -2.14
Cpsf3Q9QXK7 Gm22287-201ENSMUST00000083197 107 ntBASIC1.69□□□□□ -2.14
Cpsf3Q9QXK7 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC1.69□□□□□ -2.14
Cpsf3Q9QXK7 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
Cpsf3Q9QXK7 Gm23492-201ENSMUST00000116837 115 ntBASIC1.68□□□□□ -2.14
Cpsf3Q9QXK7 Gm14674-201ENSMUST00000117816 342 ntBASIC1.68□□□□□ -2.14
Cpsf3Q9QXK7 Gm22556-201ENSMUST00000157803 100 ntBASIC1.68□□□□□ -2.14
Cpsf3Q9QXK7 Gm24277-201ENSMUST00000158661 104 ntBASIC1.68□□□□□ -2.14
Cpsf3Q9QXK7 Gm27248-201ENSMUST00000184004 166 ntBASIC1.68□□□□□ -2.14
Cpsf3Q9QXK7 Gm27521-201ENSMUST00000184022 64 ntBASIC1.68□□□□□ -2.14
Cpsf3Q9QXK7 Mir7241-201ENSMUST00000184532 64 ntBASIC1.68□□□□□ -2.14
Cpsf3Q9QXK7 Gm28849-201ENSMUST00000188127 174 ntBASIC1.68□□□□□ -2.14
Cpsf3Q9QXK7 Gm37146-201ENSMUST00000192572 463 ntTSL 3 BASIC1.68□□□□□ -2.14
Cpsf3Q9QXK7 Gm37693-201ENSMUST00000194562 234 ntBASIC1.68□□□□□ -2.14
Cpsf3Q9QXK7 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
Cpsf3Q9QXK7 Gm45313-201ENSMUST00000210584 178 ntBASIC1.68□□□□□ -2.14
Cpsf3Q9QXK7 CT485608.2-201ENSMUST00000227210 291 ntBASIC1.68□□□□□ -2.14
Cpsf3Q9QXK7 Gm24966-201ENSMUST00000082443 79 ntBASIC1.68□□□□□ -2.14
Cpsf3Q9QXK7 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
Cpsf3Q9QXK7 Gm2869-201ENSMUST00000124359 2621 ntBASIC1.67□□□□□ -2.14
Cpsf3Q9QXK7 Gm26135-201ENSMUST00000101993 72 ntBASIC1.67□□□□□ -2.14
Cpsf3Q9QXK7 Mir767-201ENSMUST00000103256 107 ntBASIC1.67□□□□□ -2.14
Cpsf3Q9QXK7 Gm25832-201ENSMUST00000104140 130 ntBASIC1.67□□□□□ -2.14
Cpsf3Q9QXK7 Gm14937-201ENSMUST00000119709 208 ntBASIC1.67□□□□□ -2.14
Cpsf3Q9QXK7 Gm14919-201ENSMUST00000120839 390 ntBASIC1.67□□□□□ -2.14
Cpsf3Q9QXK7 Gm15115-201ENSMUST00000121145 264 ntBASIC1.67□□□□□ -2.14
Cpsf3Q9QXK7 Gm25914-201ENSMUST00000157618 153 ntBASIC1.67□□□□□ -2.14
Cpsf3Q9QXK7 Gm22386-201ENSMUST00000158192 129 ntBASIC1.67□□□□□ -2.14
Cpsf3Q9QXK7 Snord50b-201ENSMUST00000178497 72 ntBASIC1.67□□□□□ -2.14
Cpsf3Q9QXK7 Gm44055-201ENSMUST00000204376 247 ntBASIC1.67□□□□□ -2.14
Cpsf3Q9QXK7 AC160863.1-201ENSMUST00000218412 317 ntBASIC1.67□□□□□ -2.14
Cpsf3Q9QXK7 Vmn2r-ps102-203ENSMUST00000222739 604 ntTSL 5 BASIC1.67□□□□□ -2.14
Cpsf3Q9QXK7 AC163295.1-201ENSMUST00000227840 314 ntBASIC1.67□□□□□ -2.14
Cpsf3Q9QXK7 Gm22571-201ENSMUST00000082984 70 ntBASIC1.67□□□□□ -2.14
Cpsf3Q9QXK7 Snora3-201ENSMUST00000083082 132 ntBASIC1.67□□□□□ -2.14
Cpsf3Q9QXK7 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
Cpsf3Q9QXK7 Olfr821-203ENSMUST00000214177 1929 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
Cpsf3Q9QXK7 Gm15162-201ENSMUST00000119325 283 ntBASIC1.66□□□□□ -2.14
Cpsf3Q9QXK7 Gm11904-201ENSMUST00000120562 248 ntBASIC1.66□□□□□ -2.14
Retrieved 100 of 76,532 protein–RNA pairs in 254.6 ms