Protein–RNA interactions for Protein: Q9QXD8

Limd1, LIM domain-containing protein 1, mousemouse

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limd1Q9QXD8 Lztfl1-201ENSMUST00000026274 4070 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Limd1Q9QXD8 Fsip2-203ENSMUST00000143764 21116 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Limd1Q9QXD8 Traj24-201ENSMUST00000103717 63 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Limd1Q9QXD8 Gm13588-201ENSMUST00000120026 135 ntBASIC3.67□□□□□ -1.82
Limd1Q9QXD8 Mir7k-201ENSMUST00000184115 110 ntBASIC3.67□□□□□ -1.82
Limd1Q9QXD8 Olfr439-ps1-201ENSMUST00000204679 307 ntBASIC3.67□□□□□ -1.82
Limd1Q9QXD8 Gm45791-201ENSMUST00000212908 352 ntBASIC3.67□□□□□ -1.82
Limd1Q9QXD8 AC153564.2-201ENSMUST00000219464 273 ntBASIC3.67□□□□□ -1.82
Limd1Q9QXD8 Gm23244-201ENSMUST00000083375 92 ntBASIC3.67□□□□□ -1.82
Limd1Q9QXD8 Gm14440-202ENSMUST00000109051 3382 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Limd1Q9QXD8 Csmd3-209ENSMUST00000162830 13012 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Limd1Q9QXD8 Gm33962-201ENSMUST00000182643 2592 ntBASIC3.66□□□□□ -1.82
Limd1Q9QXD8 Gm12013-201ENSMUST00000121971 155 ntBASIC3.66□□□□□ -1.82
Limd1Q9QXD8 Gm23588-201ENSMUST00000157659 99 ntBASIC3.66□□□□□ -1.82
Limd1Q9QXD8 Gm23152-201ENSMUST00000175322 116 ntBASIC3.66□□□□□ -1.82
Limd1Q9QXD8 Gm22510-201ENSMUST00000179304 79 ntBASIC3.66□□□□□ -1.82
Limd1Q9QXD8 Gm26336-201ENSMUST00000179449 79 ntBASIC3.66□□□□□ -1.82
Limd1Q9QXD8 Gm26390-201ENSMUST00000179628 79 ntBASIC3.66□□□□□ -1.82
Limd1Q9QXD8 Gm27783-201ENSMUST00000183534 105 ntBASIC3.66□□□□□ -1.82
Limd1Q9QXD8 Mir6715-201ENSMUST00000184990 57 ntBASIC3.66□□□□□ -1.82
Limd1Q9QXD8 Gm45430-201ENSMUST00000211276 260 ntTSL 5 BASIC3.66□□□□□ -1.82
Limd1Q9QXD8 AC144783.2-201ENSMUST00000219089 195 ntBASIC3.66□□□□□ -1.82
Limd1Q9QXD8 AC133083.2-201ENSMUST00000222826 272 ntTSL 5 BASIC3.66□□□□□ -1.82
Limd1Q9QXD8 AC167669.1-201ENSMUST00000224932 384 ntBASIC3.66□□□□□ -1.82
Limd1Q9QXD8 Mroh9-201ENSMUST00000096608 2956 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Limd1Q9QXD8 Vmn2r27-201ENSMUST00000100968 2574 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Limd1Q9QXD8 Vmn2r65-201ENSMUST00000044583 2538 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Limd1Q9QXD8 Gm15190-201ENSMUST00000120855 276 ntBASIC3.65□□□□□ -1.83
Limd1Q9QXD8 Gm25544-201ENSMUST00000122676 120 ntBASIC3.65□□□□□ -1.83
Limd1Q9QXD8 Gm14389-201ENSMUST00000140453 241 ntBASIC3.65□□□□□ -1.83
Limd1Q9QXD8 Gm28159-201ENSMUST00000190296 696 ntBASIC3.65□□□□□ -1.83
Limd1Q9QXD8 Gm37330-201ENSMUST00000192606 153 ntBASIC3.65□□□□□ -1.83
Limd1Q9QXD8 CT030161.1-201ENSMUST00000218411 124 ntBASIC3.65□□□□□ -1.83
Limd1Q9QXD8 Vmn1r185-213ENSMUST00000228676 5199 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Limd1Q9QXD8 Cp-204ENSMUST00000108328 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
Limd1Q9QXD8 AC164164.1-201ENSMUST00000223245 2340 ntBASIC3.64□□□□□ -1.83
Limd1Q9QXD8 Olfr652-202ENSMUST00000215410 4672 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Limd1Q9QXD8 Gm14946-201ENSMUST00000119859 296 ntBASIC3.64□□□□□ -1.83
Limd1Q9QXD8 Gm44343-201ENSMUST00000196702 90 ntBASIC3.64□□□□□ -1.83
Limd1Q9QXD8 AC129085.1-201ENSMUST00000225263 165 ntBASIC3.64□□□□□ -1.83
Limd1Q9QXD8 Cntn6-202ENSMUST00000161070 3515 ntTSL 5 BASIC3.64□□□□□ -1.83
Limd1Q9QXD8 Gm3259-201ENSMUST00000101015 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.64□□□□□ -1.83
Limd1Q9QXD8 F8-201ENSMUST00000033539 9784 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
Limd1Q9QXD8 Acer3-202ENSMUST00000120520 3964 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Limd1Q9QXD8 Gm23747-201ENSMUST00000104228 131 ntBASIC3.63□□□□□ -1.83
Limd1Q9QXD8 Gm24559-201ENSMUST00000157519 121 ntBASIC3.63□□□□□ -1.83
Limd1Q9QXD8 Gm25910-201ENSMUST00000157620 140 ntBASIC3.63□□□□□ -1.83
Limd1Q9QXD8 Gm22532-201ENSMUST00000158822 140 ntBASIC3.63□□□□□ -1.83
Limd1Q9QXD8 Gm5224-201ENSMUST00000183060 350 ntBASIC3.63□□□□□ -1.83
Limd1Q9QXD8 Gm44491-201ENSMUST00000196794 96 ntBASIC3.63□□□□□ -1.83
Limd1Q9QXD8 AC159188.1-201ENSMUST00000225198 526 ntBASIC3.63□□□□□ -1.83
Limd1Q9QXD8 Gm22306-201ENSMUST00000082692 107 ntBASIC3.63□□□□□ -1.83
Limd1Q9QXD8 Snora31-201ENSMUST00000083213 130 ntBASIC3.63□□□□□ -1.83
Limd1Q9QXD8 Gm26168-201ENSMUST00000083787 112 ntBASIC3.63□□□□□ -1.83
Limd1Q9QXD8 AC161250.2-201ENSMUST00000215114 3107 ntBASIC3.63□□□□□ -1.83
Limd1Q9QXD8 Tlr3-205ENSMUST00000209772 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Limd1Q9QXD8 Gm42585-201ENSMUST00000198731 4020 ntBASIC3.62□□□□□ -1.83
Limd1Q9QXD8 Gm11192-201ENSMUST00000127017 151 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Limd1Q9QXD8 Gm23253-201ENSMUST00000157441 104 ntBASIC3.62□□□□□ -1.83
Limd1Q9QXD8 Gm28358-202ENSMUST00000189292 223 ntBASIC3.62□□□□□ -1.83
Limd1Q9QXD8 AC098718.1-201ENSMUST00000226166 175 ntBASIC3.62□□□□□ -1.83
Limd1Q9QXD8 Gm23038-201ENSMUST00000083873 104 ntBASIC3.62□□□□□ -1.83
Limd1Q9QXD8 Vmn2r37-201ENSMUST00000072787 3081 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Limd1Q9QXD8 Nlrp9a-202ENSMUST00000108387 3336 ntAPPRIS P4 TSL 1 (best) BASIC3.61□□□□□ -1.83
Limd1Q9QXD8 Zfp40-206ENSMUST00000172177 2736 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Limd1Q9QXD8 Gm22658-201ENSMUST00000104196 155 ntBASIC3.61□□□□□ -1.83
Limd1Q9QXD8 Gm26150-201ENSMUST00000157426 151 ntBASIC3.61□□□□□ -1.83
Limd1Q9QXD8 Gm23113-201ENSMUST00000158477 99 ntBASIC3.61□□□□□ -1.83
Limd1Q9QXD8 Gm20672-201ENSMUST00000176605 261 ntBASIC3.61□□□□□ -1.83
Limd1Q9QXD8 AC118006.1-201ENSMUST00000224211 501 ntBASIC3.61□□□□□ -1.83
Limd1Q9QXD8 Gm26175-201ENSMUST00000083794 131 ntBASIC3.61□□□□□ -1.83
Limd1Q9QXD8 Gm26074-201ENSMUST00000104063 129 ntBASIC3.6□□□□□ -1.83
Limd1Q9QXD8 Gm25539-201ENSMUST00000116886 122 ntBASIC3.6□□□□□ -1.83
Limd1Q9QXD8 Gm27893-201ENSMUST00000184408 194 ntBASIC3.6□□□□□ -1.83
Limd1Q9QXD8 Gm44393-201ENSMUST00000197418 138 ntBASIC3.6□□□□□ -1.83
Limd1Q9QXD8 Gm44464-201ENSMUST00000198010 138 ntBASIC3.6□□□□□ -1.83
Limd1Q9QXD8 Igkv13-57-1-201ENSMUST00000198063 305 ntBASIC3.6□□□□□ -1.83
Limd1Q9QXD8 Etd-201ENSMUST00000074232 478 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
Limd1Q9QXD8 Gm22979-201ENSMUST00000082609 159 ntBASIC3.6□□□□□ -1.83
Limd1Q9QXD8 Gm22950-201ENSMUST00000082776 107 ntBASIC3.6□□□□□ -1.83
Limd1Q9QXD8 Gm10212-201ENSMUST00000087884 324 ntBASIC3.6□□□□□ -1.83
Limd1Q9QXD8 Olfr1229-203ENSMUST00000214593 3404 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Limd1Q9QXD8 Olfr790-203ENSMUST00000215067 2659 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Limd1Q9QXD8 Gm9696-201ENSMUST00000094227 3050 ntTSL 2 BASIC3.59□□□□□ -1.83
Limd1Q9QXD8 Gm25091-201ENSMUST00000103997 71 ntBASIC3.59□□□□□ -1.83
Limd1Q9QXD8 Olfr726-204ENSMUST00000215105 1752 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Limd1Q9QXD8 Gm45558-201ENSMUST00000209384 1895 ntBASIC3.58□□□□□ -1.84
Limd1Q9QXD8 AC153966.1-201ENSMUST00000220106 3764 ntBASIC3.58□□□□□ -1.84
Limd1Q9QXD8 Gm43373-201ENSMUST00000202552 2870 ntBASIC3.58□□□□□ -1.84
Limd1Q9QXD8 Olfr1253-202ENSMUST00000213484 4812 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Limd1Q9QXD8 Mir1198-201ENSMUST00000116995 121 ntBASIC3.58□□□□□ -1.84
Limd1Q9QXD8 Rpl36a-ps3-201ENSMUST00000120093 321 ntBASIC3.58□□□□□ -1.84
Limd1Q9QXD8 Gm24930-201ENSMUST00000158315 83 ntBASIC3.58□□□□□ -1.84
Limd1Q9QXD8 Gm37081-201ENSMUST00000192034 196 ntBASIC3.58□□□□□ -1.84
Limd1Q9QXD8 Gm38997-201ENSMUST00000205669 304 ntTSL 5 BASIC3.58□□□□□ -1.84
Limd1Q9QXD8 Olfr1046-202ENSMUST00000213987 2770 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Limd1Q9QXD8 Themis-201ENSMUST00000056097 5082 ntAPPRIS P2 TSL 1 (best) BASIC3.57□□□□□ -1.84
Limd1Q9QXD8 Gm26423-201ENSMUST00000104277 128 ntBASIC3.57□□□□□ -1.84
Limd1Q9QXD8 Gm14709-201ENSMUST00000121225 304 ntBASIC3.57□□□□□ -1.84
Limd1Q9QXD8 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 82.5 ms