Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Gm24818-201ENSMUST00000175093 161 ntBASIC0.74□□□□□ -2.29
Trem1Q9JKE2 Gm23660-201ENSMUST00000178362 79 ntBASIC0.74□□□□□ -2.29
Trem1Q9JKE2 Gm24088-201ENSMUST00000179100 79 ntBASIC0.74□□□□□ -2.29
Trem1Q9JKE2 Gm25579-201ENSMUST00000083407 106 ntBASIC0.74□□□□□ -2.29
Trem1Q9JKE2 Gm24163-201ENSMUST00000093660 132 ntBASIC0.74□□□□□ -2.29
Trem1Q9JKE2 Gm12512-201ENSMUST00000119620 217 ntBASIC0.73□□□□□ -2.29
Trem1Q9JKE2 Gm14782-201ENSMUST00000120151 195 ntBASIC0.73□□□□□ -2.29
Trem1Q9JKE2 Gm23996-201ENSMUST00000158062 131 ntBASIC0.73□□□□□ -2.29
Trem1Q9JKE2 Gm23636-201ENSMUST00000175070 95 ntBASIC0.73□□□□□ -2.29
Trem1Q9JKE2 Gm22802-201ENSMUST00000175621 89 ntBASIC0.73□□□□□ -2.29
Trem1Q9JKE2 Gm27587-201ENSMUST00000185116 163 ntBASIC0.73□□□□□ -2.29
Trem1Q9JKE2 Trav15d-3-201ENSMUST00000198604 167 ntBASIC0.73□□□□□ -2.29
Trem1Q9JKE2 Trav15n-3-201ENSMUST00000200498 168 ntBASIC0.73□□□□□ -2.29
Trem1Q9JKE2 CT485607.2-201ENSMUST00000214650 91 ntBASIC0.73□□□□□ -2.29
Trem1Q9JKE2 AC160550.1-201ENSMUST00000228659 181 ntBASIC0.73□□□□□ -2.29
Trem1Q9JKE2 Gm22743-201ENSMUST00000083445 133 ntBASIC0.73□□□□□ -2.29
Trem1Q9JKE2 Gm3867-201ENSMUST00000086108 279 ntBASIC0.73□□□□□ -2.29
Trem1Q9JKE2 Olfr183-201ENSMUST00000073320 2040 ntAPPRIS P1 TSL 2 BASIC0.72□□□□□ -2.29
Trem1Q9JKE2 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC0.72□□□□□ -2.29
Trem1Q9JKE2 Gm23951-201ENSMUST00000104029 132 ntBASIC0.72□□□□□ -2.29
Trem1Q9JKE2 Gm11792-201ENSMUST00000120640 168 ntBASIC0.72□□□□□ -2.29
Trem1Q9JKE2 Gm25909-201ENSMUST00000157619 121 ntBASIC0.72□□□□□ -2.29
Trem1Q9JKE2 Gm24853-201ENSMUST00000158026 121 ntBASIC0.72□□□□□ -2.29
Trem1Q9JKE2 Gm26358-201ENSMUST00000158215 97 ntBASIC0.72□□□□□ -2.29
Trem1Q9JKE2 Gm29229-201ENSMUST00000188874 323 ntBASIC0.72□□□□□ -2.29
Trem1Q9JKE2 Gm37146-201ENSMUST00000192572 463 ntTSL 3 BASIC0.72□□□□□ -2.29
Trem1Q9JKE2 Gm44396-201ENSMUST00000199843 114 ntBASIC0.72□□□□□ -2.29
Trem1Q9JKE2 Gm18213-201ENSMUST00000207850 178 ntBASIC0.72□□□□□ -2.29
Trem1Q9JKE2 Gm5023-201ENSMUST00000217442 587 ntBASIC0.72□□□□□ -2.29
Trem1Q9JKE2 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC0.72□□□□□ -2.29
Trem1Q9JKE2 mt-Atp6-201ENSMUST00000082408 681 ntAPPRIS P1 BASIC0.72□□□□□ -2.29
Trem1Q9JKE2 Mir490-201ENSMUST00000093567 84 ntBASIC0.72□□□□□ -2.29
Trem1Q9JKE2 Mir465b-1-201ENSMUST00000103940 79 ntBASIC0.71□□□□□ -2.3
Trem1Q9JKE2 Gm23203-201ENSMUST00000104374 107 ntBASIC0.71□□□□□ -2.3
Trem1Q9JKE2 Mir465b-2-201ENSMUST00000104662 79 ntBASIC0.71□□□□□ -2.3
Trem1Q9JKE2 Gm17132-201ENSMUST00000109542 1158 ntBASIC0.71□□□□□ -2.3
Trem1Q9JKE2 Gm14568-201ENSMUST00000119321 294 ntBASIC0.71□□□□□ -2.3
Trem1Q9JKE2 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC0.71□□□□□ -2.3
Trem1Q9JKE2 Gm14491-201ENSMUST00000121919 199 ntBASIC0.71□□□□□ -2.3
Trem1Q9JKE2 Gm27974-201ENSMUST00000183415 105 ntBASIC0.71□□□□□ -2.3
Trem1Q9JKE2 Gm28921-201ENSMUST00000190219 378 ntBASIC0.71□□□□□ -2.3
Trem1Q9JKE2 Sprr2c-ps-201ENSMUST00000195581 301 ntBASIC0.71□□□□□ -2.3
Trem1Q9JKE2 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC0.71□□□□□ -2.3
Trem1Q9JKE2 CT033781.2-201ENSMUST00000221113 153 ntBASIC0.71□□□□□ -2.3
Trem1Q9JKE2 AC133083.2-201ENSMUST00000222826 272 ntTSL 5 BASIC0.71□□□□□ -2.3
Trem1Q9JKE2 DQ267101-201ENSMUST00000082562 73 ntBASIC0.71□□□□□ -2.3
Trem1Q9JKE2 Gm24037-201ENSMUST00000082871 180 ntBASIC0.71□□□□□ -2.3
Trem1Q9JKE2 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC0.71□□□□□ -2.3
Trem1Q9JKE2 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC0.7□□□□□ -2.3
Trem1Q9JKE2 Gm22656-201ENSMUST00000104199 171 ntBASIC0.7□□□□□ -2.3
Trem1Q9JKE2 Gm14773-201ENSMUST00000125932 451 ntTSL 2 BASIC0.7□□□□□ -2.3
Trem1Q9JKE2 Gm22228-201ENSMUST00000157364 101 ntBASIC0.7□□□□□ -2.3
Trem1Q9JKE2 Gm22664-201ENSMUST00000158719 105 ntBASIC0.7□□□□□ -2.3
Trem1Q9JKE2 Gm21518-201ENSMUST00000178115 567 ntTSL 5 BASIC0.7□□□□□ -2.3
Trem1Q9JKE2 Gm20736-201ENSMUST00000178198 567 ntTSL 5 BASIC0.7□□□□□ -2.3
Trem1Q9JKE2 Gm20843-201ENSMUST00000178505 567 ntTSL 5 BASIC0.7□□□□□ -2.3
Trem1Q9JKE2 Gm21209-201ENSMUST00000178556 567 ntTSL 5 BASIC0.7□□□□□ -2.3
Trem1Q9JKE2 Gm21258-201ENSMUST00000178673 567 ntTSL 5 BASIC0.7□□□□□ -2.3
Trem1Q9JKE2 Gm20888-201ENSMUST00000178934 567 ntTSL 5 BASIC0.7□□□□□ -2.3
Trem1Q9JKE2 Gm21650-201ENSMUST00000179073 567 ntTSL 5 BASIC0.7□□□□□ -2.3
Trem1Q9JKE2 Gm20937-201ENSMUST00000180329 567 ntTSL 5 BASIC0.7□□□□□ -2.3
Trem1Q9JKE2 Gm27410-201ENSMUST00000183851 115 ntBASIC0.7□□□□□ -2.3
Trem1Q9JKE2 Gm28794-201ENSMUST00000185276 136 ntBASIC0.7□□□□□ -2.3
Trem1Q9JKE2 Gm20923-201ENSMUST00000190009 319 ntBASIC0.7□□□□□ -2.3
Trem1Q9JKE2 Gm21088-201ENSMUST00000190875 316 ntBASIC0.7□□□□□ -2.3
Trem1Q9JKE2 Gm9227-201ENSMUST00000194733 566 ntBASIC0.7□□□□□ -2.3
Trem1Q9JKE2 AC102369.1-201ENSMUST00000218415 373 ntBASIC0.7□□□□□ -2.3
Trem1Q9JKE2 Mir216a-201ENSMUST00000083605 72 ntBASIC0.7□□□□□ -2.3
Trem1Q9JKE2 Gm26164-201ENSMUST00000083793 104 ntBASIC0.7□□□□□ -2.3
Trem1Q9JKE2 Olfr790-203ENSMUST00000215067 2659 ntAPPRIS P1 TSL 5 BASIC0.69□□□□□ -2.3
Trem1Q9JKE2 Gm26180-201ENSMUST00000179942 107 ntBASIC0.69□□□□□ -2.3
Trem1Q9JKE2 Gm29490-201ENSMUST00000190923 342 ntBASIC0.69□□□□□ -2.3
Trem1Q9JKE2 AC158598.2-201ENSMUST00000213397 3832 ntBASIC0.69□□□□□ -2.3
Trem1Q9JKE2 AC130829.3-201ENSMUST00000222735 154 ntBASIC0.69□□□□□ -2.3
Trem1Q9JKE2 Gm24150-201ENSMUST00000082759 104 ntBASIC0.69□□□□□ -2.3
Trem1Q9JKE2 Gm24252-201ENSMUST00000083700 132 ntBASIC0.69□□□□□ -2.3
Trem1Q9JKE2 n-R5s70-201ENSMUST00000122650 116 ntBASIC0.68□□□□□ -2.3
Trem1Q9JKE2 1700120G11Rik-201ENSMUST00000150273 491 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
Trem1Q9JKE2 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC0.68□□□□□ -2.3
Trem1Q9JKE2 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC0.68□□□□□ -2.3
Trem1Q9JKE2 Gm29013-201ENSMUST00000187431 237 ntBASIC0.68□□□□□ -2.3
Trem1Q9JKE2 Gm29014-201ENSMUST00000191422 326 ntBASIC0.68□□□□□ -2.3
Trem1Q9JKE2 Gm44408-201ENSMUST00000200205 66 ntBASIC0.68□□□□□ -2.3
Trem1Q9JKE2 Gm44754-201ENSMUST00000208155 400 ntBASIC0.68□□□□□ -2.3
Trem1Q9JKE2 AC166358.7-201ENSMUST00000221132 108 ntBASIC0.68□□□□□ -2.3
Trem1Q9JKE2 AC125543.5-201ENSMUST00000222799 108 ntBASIC0.68□□□□□ -2.3
Trem1Q9JKE2 Gm23627-201ENSMUST00000082459 107 ntBASIC0.68□□□□□ -2.3
Trem1Q9JKE2 Gm22502-201ENSMUST00000082488 107 ntBASIC0.68□□□□□ -2.3
Trem1Q9JKE2 Gm22977-201ENSMUST00000082615 107 ntBASIC0.68□□□□□ -2.3
Trem1Q9JKE2 Gm24149-201ENSMUST00000082757 107 ntBASIC0.68□□□□□ -2.3
Trem1Q9JKE2 Mir101a-201ENSMUST00000083517 83 ntBASIC0.68□□□□□ -2.3
Trem1Q9JKE2 Mir324-201ENSMUST00000083600 89 ntBASIC0.68□□□□□ -2.3
Trem1Q9JKE2 AC127302.3-201ENSMUST00000215480 2791 ntBASIC0.68□□□□□ -2.3
Trem1Q9JKE2 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC0.67□□□□□ -2.3
Trem1Q9JKE2 Mir343-201ENSMUST00000102360 75 ntBASIC0.67□□□□□ -2.3
Trem1Q9JKE2 n-R5s150-201ENSMUST00000122705 108 ntBASIC0.67□□□□□ -2.3
Trem1Q9JKE2 Gm24747-201ENSMUST00000157835 87 ntBASIC0.67□□□□□ -2.3
Trem1Q9JKE2 Mir15a-201ENSMUST00000175266 84 ntBASIC0.67□□□□□ -2.3
Trem1Q9JKE2 AC104832.1-201ENSMUST00000222938 550 ntBASIC0.67□□□□□ -2.3
Trem1Q9JKE2 Gm25079-201ENSMUST00000082529 203 ntBASIC0.67□□□□□ -2.3
Retrieved 100 of 76,532 protein–RNA pairs in 93.8 ms