Protein–RNA interactions for Protein: Q9JKE1

Trem3, TREM-3, mousemouse

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem3Q9JKE1 Gm37910-201ENSMUST00000194770 217 ntTSL 5 BASIC0.12□□□□□ -2.39
Trem3Q9JKE1 Ranbp2-ps11-201ENSMUST00000197185 387 ntBASIC0.12□□□□□ -2.39
Trem3Q9JKE1 Gm43406-201ENSMUST00000200356 334 ntBASIC0.12□□□□□ -2.39
Trem3Q9JKE1 Gm30155-201ENSMUST00000223458 339 ntBASIC0.12□□□□□ -2.39
Trem3Q9JKE1 Olfr1078-ps1-201ENSMUST00000117978 632 ntBASIC0.11□□□□□ -2.39
Trem3Q9JKE1 Gm11410-201ENSMUST00000120053 1143 ntBASIC0.11□□□□□ -2.39
Trem3Q9JKE1 Gm6272-201ENSMUST00000121256 171 ntBASIC0.11□□□□□ -2.39
Trem3Q9JKE1 Gm11254-201ENSMUST00000122368 653 ntBASIC0.11□□□□□ -2.39
Trem3Q9JKE1 Gm23996-201ENSMUST00000158062 131 ntBASIC0.11□□□□□ -2.39
Trem3Q9JKE1 Gm36953-201ENSMUST00000195295 268 ntBASIC0.11□□□□□ -2.39
Trem3Q9JKE1 Gm44488-201ENSMUST00000199467 119 ntBASIC0.11□□□□□ -2.39
Trem3Q9JKE1 AC157476.1-201ENSMUST00000215555 169 ntBASIC0.11□□□□□ -2.39
Trem3Q9JKE1 AC192616.3-201ENSMUST00000220797 1124 ntBASIC0.11□□□□□ -2.39
Trem3Q9JKE1 Gm22809-201ENSMUST00000082743 156 ntBASIC0.11□□□□□ -2.39
Trem3Q9JKE1 Gm25404-201ENSMUST00000082970 107 ntBASIC0.11□□□□□ -2.39
Trem3Q9JKE1 Gm24163-201ENSMUST00000093660 132 ntBASIC0.11□□□□□ -2.39
Trem3Q9JKE1 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC0.1□□□□□ -2.39
Trem3Q9JKE1 Gm15632-201ENSMUST00000135936 246 ntTSL 1 (best) BASIC0.1□□□□□ -2.39
Trem3Q9JKE1 Gm22733-201ENSMUST00000158094 91 ntBASIC0.1□□□□□ -2.39
Trem3Q9JKE1 Gm22914-201ENSMUST00000175195 77 ntBASIC0.1□□□□□ -2.39
Trem3Q9JKE1 Gm28992-201ENSMUST00000190534 139 ntBASIC0.1□□□□□ -2.39
Trem3Q9JKE1 Gm37128-201ENSMUST00000192599 232 ntBASIC0.1□□□□□ -2.39
Trem3Q9JKE1 4930511M18Rik-201ENSMUST00000197811 679 ntTSL 1 (best) BASIC0.1□□□□□ -2.39
Trem3Q9JKE1 Gm44923-201ENSMUST00000206673 85 ntBASIC0.1□□□□□ -2.39
Trem3Q9JKE1 Gm45541-201ENSMUST00000210443 54 ntBASIC0.1□□□□□ -2.39
Trem3Q9JKE1 AC164629.1-201ENSMUST00000220250 1113 ntBASIC0.1□□□□□ -2.39
Trem3Q9JKE1 AC164297.3-201ENSMUST00000224238 94 ntBASIC0.1□□□□□ -2.39
Trem3Q9JKE1 AC100209.2-201ENSMUST00000224461 451 ntBASIC0.1□□□□□ -2.39
Trem3Q9JKE1 Gm22578-201ENSMUST00000083730 107 ntBASIC0.1□□□□□ -2.39
Trem3Q9JKE1 Gm10033-201ENSMUST00000072427 1813 ntBASIC0.1□□□□□ -2.39
Trem3Q9JKE1 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC0.09□□□□□ -2.4
Trem3Q9JKE1 Mir190b-201ENSMUST00000104803 80 ntBASIC0.09□□□□□ -2.4
Trem3Q9JKE1 Gm24833-201ENSMUST00000116775 120 ntBASIC0.09□□□□□ -2.4
Trem3Q9JKE1 Gm11856-201ENSMUST00000118712 276 ntBASIC0.09□□□□□ -2.4
Trem3Q9JKE1 Gm16546-201ENSMUST00000159442 355 ntBASIC0.09□□□□□ -2.4
Trem3Q9JKE1 Gm20391-201ENSMUST00000174722 106 ntBASIC0.09□□□□□ -2.4
Trem3Q9JKE1 Gm18417-201ENSMUST00000176564 648 ntBASIC0.09□□□□□ -2.4
Trem3Q9JKE1 Gm17067-202ENSMUST00000180131 123 ntBASIC0.09□□□□□ -2.4
Trem3Q9JKE1 Gm43513-201ENSMUST00000199779 1076 ntBASIC0.09□□□□□ -2.4
Trem3Q9JKE1 Gm20144-201ENSMUST00000203031 165 ntBASIC0.09□□□□□ -2.4
Trem3Q9JKE1 C030006N10Rik-201ENSMUST00000219077 517 ntBASIC0.09□□□□□ -2.4
Trem3Q9JKE1 AC165092.3-201ENSMUST00000223602 282 ntBASIC0.09□□□□□ -2.4
Trem3Q9JKE1 Snord38a-201ENSMUST00000083746 71 ntBASIC0.09□□□□□ -2.4
Trem3Q9JKE1 AC133079.1-201ENSMUST00000220943 1881 ntBASIC0.08□□□□□ -2.4
Trem3Q9JKE1 Gm22786-201ENSMUST00000104086 122 ntBASIC0.08□□□□□ -2.4
Trem3Q9JKE1 Gm22591-201ENSMUST00000104243 106 ntBASIC0.08□□□□□ -2.4
Trem3Q9JKE1 Xlr4d-ps-201ENSMUST00000118894 646 ntBASIC0.08□□□□□ -2.4
Trem3Q9JKE1 Gm11248-201ENSMUST00000119568 201 ntBASIC0.08□□□□□ -2.4
Trem3Q9JKE1 Gm22565-201ENSMUST00000175540 69 ntBASIC0.08□□□□□ -2.4
Trem3Q9JKE1 Olfr185-ps1-201ENSMUST00000205894 881 ntBASIC0.08□□□□□ -2.4
Trem3Q9JKE1 Gm44960-201ENSMUST00000207403 141 ntBASIC0.08□□□□□ -2.4
Trem3Q9JKE1 Gm44948-201ENSMUST00000209050 149 ntBASIC0.08□□□□□ -2.4
Trem3Q9JKE1 AC159297.2-201ENSMUST00000219567 1075 ntBASIC0.08□□□□□ -2.4
Trem3Q9JKE1 Gm25789-201ENSMUST00000083294 76 ntBASIC0.08□□□□□ -2.4
Trem3Q9JKE1 Gm22743-201ENSMUST00000083445 133 ntBASIC0.08□□□□□ -2.4
Trem3Q9JKE1 Gm22469-201ENSMUST00000104118 133 ntBASIC0.07□□□□□ -2.4
Trem3Q9JKE1 Gm23169-201ENSMUST00000157157 112 ntBASIC0.07□□□□□ -2.4
Trem3Q9JKE1 Gm22011-201ENSMUST00000158790 123 ntBASIC0.07□□□□□ -2.4
Trem3Q9JKE1 Gm23008-201ENSMUST00000158946 80 ntBASIC0.07□□□□□ -2.4
Trem3Q9JKE1 Vmn1r-ps149-201ENSMUST00000176997 183 ntBASIC0.07□□□□□ -2.4
Trem3Q9JKE1 Gm23523-201ENSMUST00000180190 107 ntBASIC0.07□□□□□ -2.4
Trem3Q9JKE1 Gm44142-201ENSMUST00000203358 311 ntBASIC0.07□□□□□ -2.4
Trem3Q9JKE1 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC0.07□□□□□ -2.4
Trem3Q9JKE1 AC122905.2-201ENSMUST00000220325 269 ntBASIC0.07□□□□□ -2.4
Trem3Q9JKE1 CT009718.4-201ENSMUST00000221881 109 ntBASIC0.07□□□□□ -2.4
Trem3Q9JKE1 Stfa2l1-201ENSMUST00000079184 414 ntAPPRIS P1 TSL 1 (best) BASIC0.07□□□□□ -2.4
Trem3Q9JKE1 Mir10b-201ENSMUST00000083566 68 ntBASIC0.07□□□□□ -2.4
Trem3Q9JKE1 Mir710-201ENSMUST00000102088 110 ntBASIC0.06□□□□□ -2.4
Trem3Q9JKE1 Gm23321-201ENSMUST00000104465 126 ntBASIC0.06□□□□□ -2.4
Trem3Q9JKE1 Mir1b-201ENSMUST00000117012 122 ntBASIC0.06□□□□□ -2.4
Trem3Q9JKE1 Gm23991-201ENSMUST00000117033 93 ntBASIC0.06□□□□□ -2.4
Trem3Q9JKE1 Gm14007-201ENSMUST00000118288 210 ntBASIC0.06□□□□□ -2.4
Trem3Q9JKE1 Gm6985-201ENSMUST00000121255 271 ntBASIC0.06□□□□□ -2.4
Trem3Q9JKE1 Gm12068-201ENSMUST00000153153 376 ntTSL 3 BASIC0.06□□□□□ -2.4
Trem3Q9JKE1 Gm25976-201ENSMUST00000158695 130 ntBASIC0.06□□□□□ -2.4
Trem3Q9JKE1 4930579O11Rik-202ENSMUST00000168243 672 ntTSL 3 BASIC0.06□□□□□ -2.4
Trem3Q9JKE1 Gm7258-201ENSMUST00000179317 300 ntBASIC0.06□□□□□ -2.4
Trem3Q9JKE1 Gm26200-201ENSMUST00000180273 79 ntBASIC0.06□□□□□ -2.4
Trem3Q9JKE1 Mir7014-201ENSMUST00000183853 63 ntBASIC0.06□□□□□ -2.4
Trem3Q9JKE1 Gm25627-201ENSMUST00000084003 153 ntBASIC0.06□□□□□ -2.4
Trem3Q9JKE1 n-R5s18-201ENSMUST00000122740 121 ntBASIC0.05□□□□□ -2.4
Trem3Q9JKE1 Gm24005-201ENSMUST00000158459 296 ntBASIC0.05□□□□□ -2.4
Trem3Q9JKE1 Gm24308-201ENSMUST00000177773 114 ntBASIC0.05□□□□□ -2.4
Trem3Q9JKE1 Gm22631-201ENSMUST00000179656 94 ntBASIC0.05□□□□□ -2.4
Trem3Q9JKE1 Gm27659-201ENSMUST00000183472 98 ntBASIC0.05□□□□□ -2.4
Trem3Q9JKE1 Gm38261-201ENSMUST00000192608 316 ntBASIC0.05□□□□□ -2.4
Trem3Q9JKE1 Mir654-201ENSMUST00000104787 84 ntBASIC0.04□□□□□ -2.4
Trem3Q9JKE1 Gm16358-201ENSMUST00000146046 210 ntBASIC0.04□□□□□ -2.4
Trem3Q9JKE1 Gm10715-201ENSMUST00000155807 675 ntAPPRIS ALT2 TSL 5 BASIC0.04□□□□□ -2.4
Trem3Q9JKE1 Gm16539-201ENSMUST00000160086 327 ntBASIC0.04□□□□□ -2.4
Trem3Q9JKE1 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC0.04□□□□□ -2.4
Trem3Q9JKE1 Gm25952-201ENSMUST00000175329 74 ntBASIC0.04□□□□□ -2.4
Trem3Q9JKE1 Gm27385-201ENSMUST00000184747 104 ntBASIC0.04□□□□□ -2.4
Trem3Q9JKE1 AC124542.1-201ENSMUST00000205588 908 ntBASIC0.04□□□□□ -2.4
Trem3Q9JKE1 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC0.04□□□□□ -2.4
Trem3Q9JKE1 AC154248.2-201ENSMUST00000221964 659 ntTSL 5 BASIC0.04□□□□□ -2.4
Trem3Q9JKE1 Gm24355-201ENSMUST00000082858 122 ntBASIC0.04□□□□□ -2.4
Trem3Q9JKE1 Mir500-201ENSMUST00000093600 92 ntBASIC0.04□□□□□ -2.4
Trem3Q9JKE1 AC159625.1-201ENSMUST00000220994 2625 ntBASIC0.03□□□□□ -2.4
Trem3Q9JKE1 Mir701-201ENSMUST00000102208 109 ntBASIC0.03□□□□□ -2.4
Retrieved 100 of 76,532 protein–RNA pairs in 132.1 ms