Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Gm26135-201ENSMUST00000101993 72 ntBASIC2.17□□□□□ -2.06
Trim54Q9ERP3 Gm22784-201ENSMUST00000104088 132 ntBASIC2.17□□□□□ -2.06
Trim54Q9ERP3 Gm12721-201ENSMUST00000120621 268 ntBASIC2.17□□□□□ -2.06
Trim54Q9ERP3 Gm24440-201ENSMUST00000157236 63 ntBASIC2.17□□□□□ -2.06
Trim54Q9ERP3 Gm23043-201ENSMUST00000157890 109 ntBASIC2.17□□□□□ -2.06
Trim54Q9ERP3 Gm25460-201ENSMUST00000157954 127 ntBASIC2.17□□□□□ -2.06
Trim54Q9ERP3 Gm25371-201ENSMUST00000158162 101 ntBASIC2.17□□□□□ -2.06
Trim54Q9ERP3 Gm24512-201ENSMUST00000174963 65 ntBASIC2.17□□□□□ -2.06
Trim54Q9ERP3 Gm24510-201ENSMUST00000174965 94 ntBASIC2.17□□□□□ -2.06
Trim54Q9ERP3 Snord50b-201ENSMUST00000178497 72 ntBASIC2.17□□□□□ -2.06
Trim54Q9ERP3 Gm25235-201ENSMUST00000179933 107 ntBASIC2.17□□□□□ -2.06
Trim54Q9ERP3 Gm44352-201ENSMUST00000196358 110 ntBASIC2.17□□□□□ -2.06
Trim54Q9ERP3 AC239878.2-201ENSMUST00000224048 464 ntBASIC2.17□□□□□ -2.06
Trim54Q9ERP3 AC124456.1-201ENSMUST00000217391 2597 ntBASIC2.16□□□□□ -2.06
Trim54Q9ERP3 Gm14846-201ENSMUST00000121868 216 ntBASIC2.16□□□□□ -2.06
Trim54Q9ERP3 Gm26150-201ENSMUST00000157426 151 ntBASIC2.16□□□□□ -2.06
Trim54Q9ERP3 Gm23219-201ENSMUST00000158123 87 ntBASIC2.16□□□□□ -2.06
Trim54Q9ERP3 Rnu7-201ENSMUST00000158458 62 ntBASIC2.16□□□□□ -2.06
Trim54Q9ERP3 Gm24277-201ENSMUST00000158661 104 ntBASIC2.16□□□□□ -2.06
Trim54Q9ERP3 Mir6336-201ENSMUST00000183581 130 ntBASIC2.16□□□□□ -2.06
Trim54Q9ERP3 Gm37146-201ENSMUST00000192572 463 ntTSL 3 BASIC2.16□□□□□ -2.06
Trim54Q9ERP3 Gm37579-201ENSMUST00000194291 142 ntBASIC2.16□□□□□ -2.06
Trim54Q9ERP3 Gm45654-201ENSMUST00000210980 123 ntBASIC2.16□□□□□ -2.06
Trim54Q9ERP3 Gm22683-201ENSMUST00000082854 137 ntBASIC2.16□□□□□ -2.06
Trim54Q9ERP3 Rny1-201ENSMUST00000083767 112 ntBASIC2.16□□□□□ -2.06
Trim54Q9ERP3 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC2.16□□□□□ -2.06
Trim54Q9ERP3 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
Trim54Q9ERP3 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC2.15□□□□□ -2.07
Trim54Q9ERP3 Gm23536-201ENSMUST00000157541 134 ntBASIC2.15□□□□□ -2.07
Trim54Q9ERP3 Gm24392-201ENSMUST00000158136 103 ntBASIC2.15□□□□□ -2.07
Trim54Q9ERP3 Gm24667-201ENSMUST00000158938 103 ntBASIC2.15□□□□□ -2.07
Trim54Q9ERP3 Gm23342-201ENSMUST00000158958 115 ntBASIC2.15□□□□□ -2.07
Trim54Q9ERP3 Gm25615-201ENSMUST00000177836 94 ntBASIC2.15□□□□□ -2.07
Trim54Q9ERP3 4930598A11Rik-201ENSMUST00000180742 628 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
Trim54Q9ERP3 Mir7016-201ENSMUST00000184308 72 ntBASIC2.15□□□□□ -2.07
Trim54Q9ERP3 Gm9156-201ENSMUST00000189660 463 ntBASIC2.15□□□□□ -2.07
Trim54Q9ERP3 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
Trim54Q9ERP3 Mir181b-2-201ENSMUST00000083644 89 ntBASIC2.15□□□□□ -2.07
Trim54Q9ERP3 Olfr1442-202ENSMUST00000207341 3126 ntAPPRIS P1 TSL 3 BASIC2.15□□□□□ -2.07
Trim54Q9ERP3 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
Trim54Q9ERP3 n-R5s15-201ENSMUST00000122635 111 ntBASIC2.14□□□□□ -2.07
Trim54Q9ERP3 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
Trim54Q9ERP3 Gm24394-201ENSMUST00000158141 123 ntBASIC2.14□□□□□ -2.07
Trim54Q9ERP3 Gm26405-201ENSMUST00000158495 100 ntBASIC2.14□□□□□ -2.07
Trim54Q9ERP3 Gm16162-201ENSMUST00000162296 297 ntBASIC2.14□□□□□ -2.07
Trim54Q9ERP3 Gm24333-201ENSMUST00000175101 84 ntBASIC2.14□□□□□ -2.07
Trim54Q9ERP3 Ranbp2-ps7-201ENSMUST00000183924 384 ntBASIC2.14□□□□□ -2.07
Trim54Q9ERP3 Mir7225-201ENSMUST00000184178 54 ntBASIC2.14□□□□□ -2.07
Trim54Q9ERP3 Gm45907-201ENSMUST00000213023 193 ntBASIC2.14□□□□□ -2.07
Trim54Q9ERP3 Snord118-201ENSMUST00000082965 135 ntBASIC2.14□□□□□ -2.07
Trim54Q9ERP3 Gm24536-201ENSMUST00000083144 107 ntBASIC2.14□□□□□ -2.07
Trim54Q9ERP3 Mir429-201ENSMUST00000083493 83 ntBASIC2.14□□□□□ -2.07
Trim54Q9ERP3 Olfr1442-203ENSMUST00000208494 3593 ntAPPRIS P1 TSL 3 BASIC2.14□□□□□ -2.07
Trim54Q9ERP3 Olfr659-202ENSMUST00000214986 4842 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Trim54Q9ERP3 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
Trim54Q9ERP3 Gm24632-201ENSMUST00000122770 323 ntBASIC2.13□□□□□ -2.07
Trim54Q9ERP3 Snora15-201ENSMUST00000177461 131 ntBASIC2.13□□□□□ -2.07
Trim54Q9ERP3 Gm19123-201ENSMUST00000190716 651 ntBASIC2.13□□□□□ -2.07
Trim54Q9ERP3 Gm44491-201ENSMUST00000196794 96 ntBASIC2.13□□□□□ -2.07
Trim54Q9ERP3 Mir7217-201ENSMUST00000200304 62 ntBASIC2.13□□□□□ -2.07
Trim54Q9ERP3 AC159896.1-201ENSMUST00000215264 215 ntBASIC2.13□□□□□ -2.07
Trim54Q9ERP3 AC134601.3-201ENSMUST00000221682 154 ntBASIC2.13□□□□□ -2.07
Trim54Q9ERP3 AC173482.5-201ENSMUST00000224181 327 ntBASIC2.13□□□□□ -2.07
Trim54Q9ERP3 Gm22248-201ENSMUST00000082482 150 ntBASIC2.13□□□□□ -2.07
Trim54Q9ERP3 Gm25813-201ENSMUST00000082748 191 ntBASIC2.13□□□□□ -2.07
Trim54Q9ERP3 Snora69-201ENSMUST00000083708 131 ntBASIC2.13□□□□□ -2.07
Trim54Q9ERP3 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC2.12□□□□□ -2.07
Trim54Q9ERP3 Gm12797-201ENSMUST00000118645 273 ntBASIC2.12□□□□□ -2.07
Trim54Q9ERP3 Gm22097-201ENSMUST00000157929 278 ntBASIC2.12□□□□□ -2.07
Trim54Q9ERP3 Gm22727-201ENSMUST00000158090 116 ntBASIC2.12□□□□□ -2.07
Trim54Q9ERP3 Gm22768-201ENSMUST00000158366 153 ntBASIC2.12□□□□□ -2.07
Trim54Q9ERP3 Gm24006-201ENSMUST00000158462 132 ntBASIC2.12□□□□□ -2.07
Trim54Q9ERP3 Gm25368-201ENSMUST00000158847 131 ntBASIC2.12□□□□□ -2.07
Trim54Q9ERP3 Mir3086-201ENSMUST00000175072 87 ntBASIC2.12□□□□□ -2.07
Trim54Q9ERP3 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC2.12□□□□□ -2.07
Trim54Q9ERP3 Snord43-201ENSMUST00000199549 108 ntBASIC2.12□□□□□ -2.07
Trim54Q9ERP3 AC132615.1-201ENSMUST00000213873 255 ntBASIC2.12□□□□□ -2.07
Trim54Q9ERP3 Gm25204-201ENSMUST00000082843 106 ntBASIC2.12□□□□□ -2.07
Trim54Q9ERP3 Snord70-201ENSMUST00000104157 87 ntBASIC2.11□□□□□ -2.07
Trim54Q9ERP3 Gm29657-201ENSMUST00000189807 342 ntBASIC2.11□□□□□ -2.07
Trim54Q9ERP3 Ighv1-1-201ENSMUST00000194912 291 ntBASIC2.11□□□□□ -2.07
Trim54Q9ERP3 Gm43427-201ENSMUST00000198188 331 ntBASIC2.11□□□□□ -2.07
Trim54Q9ERP3 Gm22723-201ENSMUST00000083820 129 ntBASIC2.11□□□□□ -2.07
Trim54Q9ERP3 Olfr851-202ENSMUST00000214130 7123 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
Trim54Q9ERP3 Olfr1253-203ENSMUST00000215185 4984 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
Trim54Q9ERP3 Gm37602-201ENSMUST00000195187 3310 ntBASIC2.1□□□□□ -2.07
Trim54Q9ERP3 Mir466b-8-201ENSMUST00000103883 86 ntBASIC2.1□□□□□ -2.07
Trim54Q9ERP3 Gm24079-201ENSMUST00000104352 132 ntBASIC2.1□□□□□ -2.07
Trim54Q9ERP3 Mir881-201ENSMUST00000104844 78 ntBASIC2.1□□□□□ -2.07
Trim54Q9ERP3 Gm25113-201ENSMUST00000157185 143 ntBASIC2.1□□□□□ -2.07
Trim54Q9ERP3 Gm25184-201ENSMUST00000157753 163 ntBASIC2.1□□□□□ -2.07
Trim54Q9ERP3 Gm27579-201ENSMUST00000158113 63 ntBASIC2.1□□□□□ -2.07
Trim54Q9ERP3 Gm23047-201ENSMUST00000177661 94 ntBASIC2.1□□□□□ -2.07
Trim54Q9ERP3 Gm27402-201ENSMUST00000183890 120 ntBASIC2.1□□□□□ -2.07
Trim54Q9ERP3 AC125167.1-201ENSMUST00000198698 141 ntBASIC2.1□□□□□ -2.07
Trim54Q9ERP3 Mir466e-201ENSMUST00000198862 84 ntBASIC2.1□□□□□ -2.07
Trim54Q9ERP3 Mir466c-1-201ENSMUST00000200654 84 ntBASIC2.1□□□□□ -2.07
Trim54Q9ERP3 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC2.1□□□□□ -2.07
Trim54Q9ERP3 AC167140.1-201ENSMUST00000224710 403 ntBASIC2.1□□□□□ -2.07
Trim54Q9ERP3 Olfr1044-202ENSMUST00000215171 3266 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 88.3 ms