Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm24277-201ENSMUST00000158661 104 ntBASIC0.7□□□□□ -2.3
Lima1Q9ERG0 Mir3968-201ENSMUST00000175355 100 ntBASIC0.7□□□□□ -2.3
Lima1Q9ERG0 Gm26180-201ENSMUST00000179942 107 ntBASIC0.7□□□□□ -2.3
Lima1Q9ERG0 Mir6346-201ENSMUST00000183982 81 ntBASIC0.7□□□□□ -2.3
Lima1Q9ERG0 Gm27236-201ENSMUST00000184147 442 ntBASIC0.7□□□□□ -2.3
Lima1Q9ERG0 Gm25820-201ENSMUST00000198589 127 ntBASIC0.7□□□□□ -2.3
Lima1Q9ERG0 Gm44960-201ENSMUST00000207403 141 ntBASIC0.7□□□□□ -2.3
Lima1Q9ERG0 AC164612.2-202ENSMUST00000216314 253 ntBASIC0.7□□□□□ -2.3
Lima1Q9ERG0 AC116589.1-201ENSMUST00000220634 327 ntBASIC0.7□□□□□ -2.3
Lima1Q9ERG0 AC114916.1-201ENSMUST00000228465 494 ntBASIC0.7□□□□□ -2.3
Lima1Q9ERG0 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
Lima1Q9ERG0 Gm25851-201ENSMUST00000082794 107 ntBASIC0.7□□□□□ -2.3
Lima1Q9ERG0 Gm24356-201ENSMUST00000082859 106 ntBASIC0.7□□□□□ -2.3
Lima1Q9ERG0 Gm25513-201ENSMUST00000083861 162 ntBASIC0.7□□□□□ -2.3
Lima1Q9ERG0 Olfr831-ps1-201ENSMUST00000086496 890 ntBASIC0.7□□□□□ -2.3
Lima1Q9ERG0 Gm14782-201ENSMUST00000120151 195 ntBASIC0.69□□□□□ -2.3
Lima1Q9ERG0 Gm14922-201ENSMUST00000121131 163 ntBASIC0.69□□□□□ -2.3
Lima1Q9ERG0 Gm25544-201ENSMUST00000122676 120 ntBASIC0.69□□□□□ -2.3
Lima1Q9ERG0 Gm25805-201ENSMUST00000122788 108 ntBASIC0.69□□□□□ -2.3
Lima1Q9ERG0 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
Lima1Q9ERG0 Gm24487-201ENSMUST00000178017 63 ntBASIC0.69□□□□□ -2.3
Lima1Q9ERG0 Gm27545-201ENSMUST00000184755 202 ntBASIC0.69□□□□□ -2.3
Lima1Q9ERG0 Gm24966-201ENSMUST00000082443 79 ntBASIC0.69□□□□□ -2.3
Lima1Q9ERG0 Gm12432-201ENSMUST00000119540 186 ntBASIC0.68□□□□□ -2.3
Lima1Q9ERG0 n-R5s188-201ENSMUST00000122646 105 ntBASIC0.68□□□□□ -2.3
Lima1Q9ERG0 Gm22435-201ENSMUST00000158552 128 ntBASIC0.68□□□□□ -2.3
Lima1Q9ERG0 Mir1954-201ENSMUST00000175595 86 ntBASIC0.68□□□□□ -2.3
Lima1Q9ERG0 Gm26968-201ENSMUST00000182894 481 ntBASIC0.68□□□□□ -2.3
Lima1Q9ERG0 Gm45704-201ENSMUST00000212582 403 ntBASIC0.68□□□□□ -2.3
Lima1Q9ERG0 AC163033.1-201ENSMUST00000218608 157 ntBASIC0.68□□□□□ -2.3
Lima1Q9ERG0 AC098718.1-201ENSMUST00000226166 175 ntBASIC0.68□□□□□ -2.3
Lima1Q9ERG0 Gm22685-201ENSMUST00000082848 106 ntBASIC0.68□□□□□ -2.3
Lima1Q9ERG0 Gm24037-201ENSMUST00000082871 180 ntBASIC0.68□□□□□ -2.3
Lima1Q9ERG0 Olfr1100-202ENSMUST00000117211 2937 ntAPPRIS P1 TSL 5 BASIC0.68□□□□□ -2.3
Lima1Q9ERG0 Gm12770-201ENSMUST00000121734 462 ntBASIC0.67□□□□□ -2.3
Lima1Q9ERG0 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC0.67□□□□□ -2.3
Lima1Q9ERG0 Gm22447-201ENSMUST00000158155 92 ntBASIC0.67□□□□□ -2.3
Lima1Q9ERG0 Cfap61-214ENSMUST00000167179 183 ntBASIC0.67□□□□□ -2.3
Lima1Q9ERG0 Gm43220-201ENSMUST00000199299 282 ntBASIC0.67□□□□□ -2.3
Lima1Q9ERG0 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC0.67□□□□□ -2.3
Lima1Q9ERG0 Gm45119-201ENSMUST00000207612 199 ntBASIC0.67□□□□□ -2.3
Lima1Q9ERG0 Gm45556-201ENSMUST00000210689 345 ntTSL 5 BASIC0.67□□□□□ -2.3
Lima1Q9ERG0 Gm33654-201ENSMUST00000221704 215 ntBASIC0.67□□□□□ -2.3
Lima1Q9ERG0 1110057P08Rik-201ENSMUST00000089097 465 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
Lima1Q9ERG0 Gm15102-201ENSMUST00000118740 1502 ntBASIC0.67□□□□□ -2.3
Lima1Q9ERG0 Gm15101-201ENSMUST00000178818 1502 ntBASIC0.67□□□□□ -2.3
Lima1Q9ERG0 Olfr867-203ENSMUST00000216538 4617 ntAPPRIS P1 TSL 5 BASIC0.67□□□□□ -2.3
Lima1Q9ERG0 Gm10033-201ENSMUST00000072427 1813 ntBASIC0.66□□□□□ -2.3
Lima1Q9ERG0 Gm24271-201ENSMUST00000102327 111 ntBASIC0.66□□□□□ -2.3
Lima1Q9ERG0 Gm22545-201ENSMUST00000104350 132 ntBASIC0.66□□□□□ -2.3
Lima1Q9ERG0 Gm12225-201ENSMUST00000117995 298 ntBASIC0.66□□□□□ -2.3
Lima1Q9ERG0 Gm24401-201ENSMUST00000157868 91 ntBASIC0.66□□□□□ -2.3
Lima1Q9ERG0 Gm22515-201ENSMUST00000158273 305 ntBASIC0.66□□□□□ -2.3
Lima1Q9ERG0 Gm25166-201ENSMUST00000158909 111 ntBASIC0.66□□□□□ -2.3
Lima1Q9ERG0 Mir3471-1-201ENSMUST00000175139 131 ntBASIC0.66□□□□□ -2.3
Lima1Q9ERG0 Mir3109-201ENSMUST00000175301 88 ntBASIC0.66□□□□□ -2.3
Lima1Q9ERG0 Gm28661-201ENSMUST00000188231 681 ntBASIC0.66□□□□□ -2.3
Lima1Q9ERG0 Gm29022-201ENSMUST00000190702 225 ntBASIC0.66□□□□□ -2.3
Lima1Q9ERG0 Gm37713-201ENSMUST00000191746 198 ntBASIC0.66□□□□□ -2.3
Lima1Q9ERG0 AC122905.2-201ENSMUST00000220325 269 ntBASIC0.66□□□□□ -2.3
Lima1Q9ERG0 AC154636.2-201ENSMUST00000222538 161 ntBASIC0.66□□□□□ -2.3
Lima1Q9ERG0 CT954323.1-201ENSMUST00000222774 229 ntBASIC0.66□□□□□ -2.3
Lima1Q9ERG0 Gm23055-201ENSMUST00000082805 94 ntBASIC0.66□□□□□ -2.3
Lima1Q9ERG0 Gm25578-201ENSMUST00000083406 104 ntBASIC0.66□□□□□ -2.3
Lima1Q9ERG0 Gm24163-201ENSMUST00000093660 132 ntBASIC0.66□□□□□ -2.3
Lima1Q9ERG0 Gm43877-201ENSMUST00000205029 2238 ntBASIC0.65□□□□□ -2.3
Lima1Q9ERG0 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.3
Lima1Q9ERG0 Gm26301-201ENSMUST00000104813 95 ntBASIC0.65□□□□□ -2.31
Lima1Q9ERG0 Gm11859-201ENSMUST00000118099 455 ntBASIC0.65□□□□□ -2.31
Lima1Q9ERG0 Gm22199-201ENSMUST00000122660 126 ntBASIC0.65□□□□□ -2.31
Lima1Q9ERG0 Gm16358-201ENSMUST00000146046 210 ntBASIC0.65□□□□□ -2.31
Lima1Q9ERG0 Gm23114-201ENSMUST00000158478 117 ntBASIC0.65□□□□□ -2.31
Lima1Q9ERG0 Gm20462-201ENSMUST00000172623 408 ntBASIC0.65□□□□□ -2.31
Lima1Q9ERG0 Gm21518-201ENSMUST00000178115 567 ntTSL 5 BASIC0.65□□□□□ -2.31
Lima1Q9ERG0 Gm20736-201ENSMUST00000178198 567 ntTSL 5 BASIC0.65□□□□□ -2.31
Lima1Q9ERG0 Gm20843-201ENSMUST00000178505 567 ntTSL 5 BASIC0.65□□□□□ -2.31
Lima1Q9ERG0 Gm21209-201ENSMUST00000178556 567 ntTSL 5 BASIC0.65□□□□□ -2.31
Lima1Q9ERG0 Gm21258-201ENSMUST00000178673 567 ntTSL 5 BASIC0.65□□□□□ -2.31
Lima1Q9ERG0 Gm20888-201ENSMUST00000178934 567 ntTSL 5 BASIC0.65□□□□□ -2.31
Lima1Q9ERG0 Gm21650-201ENSMUST00000179073 567 ntTSL 5 BASIC0.65□□□□□ -2.31
Lima1Q9ERG0 Gm20937-201ENSMUST00000180329 567 ntTSL 5 BASIC0.65□□□□□ -2.31
Lima1Q9ERG0 Gm42533-201ENSMUST00000196247 157 ntBASIC0.65□□□□□ -2.31
Lima1Q9ERG0 Gm44358-201ENSMUST00000196301 98 ntBASIC0.65□□□□□ -2.31
Lima1Q9ERG0 Gm43406-201ENSMUST00000200356 334 ntBASIC0.65□□□□□ -2.31
Lima1Q9ERG0 Gm23377-201ENSMUST00000082943 126 ntBASIC0.65□□□□□ -2.31
Lima1Q9ERG0 Mir33-201ENSMUST00000083531 69 ntBASIC0.65□□□□□ -2.31
Lima1Q9ERG0 Gm11572-201ENSMUST00000119164 120 ntBASIC0.64□□□□□ -2.31
Lima1Q9ERG0 Gm11334-201ENSMUST00000121969 156 ntBASIC0.64□□□□□ -2.31
Lima1Q9ERG0 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC0.64□□□□□ -2.31
Lima1Q9ERG0 4930511O05Rik-201ENSMUST00000155912 391 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
Lima1Q9ERG0 Gm24747-201ENSMUST00000157835 87 ntBASIC0.64□□□□□ -2.31
Lima1Q9ERG0 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC0.64□□□□□ -2.31
Lima1Q9ERG0 Gm23660-201ENSMUST00000178362 79 ntBASIC0.64□□□□□ -2.31
Lima1Q9ERG0 Gm24088-201ENSMUST00000179100 79 ntBASIC0.64□□□□□ -2.31
Lima1Q9ERG0 Gm23191-201ENSMUST00000179147 107 ntBASIC0.64□□□□□ -2.31
Lima1Q9ERG0 Gm18291-201ENSMUST00000190791 301 ntBASIC0.64□□□□□ -2.31
Lima1Q9ERG0 Gm44325-201ENSMUST00000196757 77 ntBASIC0.64□□□□□ -2.31
Lima1Q9ERG0 Olfr1435-ps1-201ENSMUST00000207773 249 ntBASIC0.64□□□□□ -2.31
Lima1Q9ERG0 Olfr1064-ps1-201ENSMUST00000213670 600 ntBASIC0.64□□□□□ -2.31
Lima1Q9ERG0 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC0.64□□□□□ -2.31
Retrieved 100 of 76,532 protein–RNA pairs in 96.6 ms