Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Ighv1-1-201ENSMUST00000194912 291 ntBASIC3.15□□□□□ -1.91
Upf1Q9EPU0 Gm45652-201ENSMUST00000210926 3831 ntBASIC3.15□□□□□ -1.91
Upf1Q9EPU0 Gm26175-201ENSMUST00000083794 131 ntBASIC3.15□□□□□ -1.91
Upf1Q9EPU0 Ifi203-202ENSMUST00000081216 3610 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
Upf1Q9EPU0 Dst-211ENSMUST00000183034 23201 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
Upf1Q9EPU0 Olfr800-202ENSMUST00000217094 3831 ntAPPRIS P1 TSL 3 BASIC3.14□□□□□ -1.91
Upf1Q9EPU0 Gm45393-201ENSMUST00000211634 2631 ntBASIC3.14□□□□□ -1.91
Upf1Q9EPU0 Gm25068-201ENSMUST00000103895 110 ntBASIC3.14□□□□□ -1.91
Upf1Q9EPU0 Gm25985-201ENSMUST00000122677 107 ntBASIC3.14□□□□□ -1.91
Upf1Q9EPU0 Gm24213-201ENSMUST00000158255 258 ntBASIC3.14□□□□□ -1.91
Upf1Q9EPU0 Gm25711-201ENSMUST00000158633 128 ntBASIC3.14□□□□□ -1.91
Upf1Q9EPU0 Gm26004-201ENSMUST00000158804 116 ntBASIC3.14□□□□□ -1.91
Upf1Q9EPU0 Mir5127-201ENSMUST00000175295 71 ntBASIC3.14□□□□□ -1.91
Upf1Q9EPU0 Gm26435-201ENSMUST00000179026 107 ntBASIC3.14□□□□□ -1.91
Upf1Q9EPU0 Gm6003-201ENSMUST00000187903 463 ntBASIC3.14□□□□□ -1.91
Upf1Q9EPU0 AC192091.2-201ENSMUST00000217869 117 ntBASIC3.14□□□□□ -1.91
Upf1Q9EPU0 Gm46993-201ENSMUST00000220708 259 ntBASIC3.14□□□□□ -1.91
Upf1Q9EPU0 Gm25813-201ENSMUST00000082748 191 ntBASIC3.14□□□□□ -1.91
Upf1Q9EPU0 Olfr1029-202ENSMUST00000217244 3743 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Upf1Q9EPU0 Olfr1033-205ENSMUST00000218397 3973 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Upf1Q9EPU0 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Upf1Q9EPU0 Gm14602-201ENSMUST00000118625 340 ntBASIC3.13□□□□□ -1.91
Upf1Q9EPU0 Mir466b-1-201ENSMUST00000177988 82 ntBASIC3.13□□□□□ -1.91
Upf1Q9EPU0 Gm44182-201ENSMUST00000204052 115 ntBASIC3.13□□□□□ -1.91
Upf1Q9EPU0 Gm25081-201ENSMUST00000082534 108 ntBASIC3.13□□□□□ -1.91
Upf1Q9EPU0 Tug1-201ENSMUST00000132077 6719 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Upf1Q9EPU0 Acer3-202ENSMUST00000120520 3964 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Upf1Q9EPU0 Tex16-201ENSMUST00000038546 3972 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
Upf1Q9EPU0 Gm24276-201ENSMUST00000102181 110 ntBASIC3.12□□□□□ -1.91
Upf1Q9EPU0 Gm14748-201ENSMUST00000119819 411 ntBASIC3.12□□□□□ -1.91
Upf1Q9EPU0 Gm23324-201ENSMUST00000157421 131 ntBASIC3.12□□□□□ -1.91
Upf1Q9EPU0 Gm24277-201ENSMUST00000158661 104 ntBASIC3.12□□□□□ -1.91
Upf1Q9EPU0 Gm6801-201ENSMUST00000190697 339 ntBASIC3.12□□□□□ -1.91
Upf1Q9EPU0 Gm43722-201ENSMUST00000196054 124 ntBASIC3.12□□□□□ -1.91
Upf1Q9EPU0 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Upf1Q9EPU0 Gm10217-201ENSMUST00000088080 135 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Upf1Q9EPU0 Pak3-205ENSMUST00000112868 8163 ntAPPRIS P3 TSL 5 BASIC3.12□□□□□ -1.91
Upf1Q9EPU0 Zfp280c-204ENSMUST00000114940 3863 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
Upf1Q9EPU0 Olfr509-203ENSMUST00000214861 3535 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Upf1Q9EPU0 Gm7145-201ENSMUST00000185381 1794 ntAPPRIS P1 TSL 3 BASIC3.12□□□□□ -1.91
Upf1Q9EPU0 AC161250.2-201ENSMUST00000215114 3107 ntBASIC3.11□□□□□ -1.91
Upf1Q9EPU0 Gm25526-201ENSMUST00000104332 132 ntBASIC3.11□□□□□ -1.91
Upf1Q9EPU0 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC3.11□□□□□ -1.91
Upf1Q9EPU0 Gm21876-201ENSMUST00000096511 282 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Upf1Q9EPU0 Pak3-203ENSMUST00000112864 8612 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
Upf1Q9EPU0 Mir499-201ENSMUST00000102357 79 ntBASIC3.1□□□□□ -1.91
Upf1Q9EPU0 Gm22935-201ENSMUST00000103960 104 ntBASIC3.1□□□□□ -1.91
Upf1Q9EPU0 Gm24131-201ENSMUST00000158539 107 ntBASIC3.1□□□□□ -1.91
Upf1Q9EPU0 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC3.1□□□□□ -1.91
Upf1Q9EPU0 Gm27991-201ENSMUST00000184804 137 ntBASIC3.1□□□□□ -1.91
Upf1Q9EPU0 Gm44938-201ENSMUST00000208614 427 ntBASIC3.1□□□□□ -1.91
Upf1Q9EPU0 AC154994.1-201ENSMUST00000217395 302 ntBASIC3.1□□□□□ -1.91
Upf1Q9EPU0 Zfp711-201ENSMUST00000071814 3817 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
Upf1Q9EPU0 Olfr1369-ps1-205ENSMUST00000215941 3597 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Upf1Q9EPU0 Gm27047-201ENSMUST00000183072 1819 ntBASIC3.09□□□□□ -1.91
Upf1Q9EPU0 Vmn1r219-204ENSMUST00000228113 5639 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
Upf1Q9EPU0 Acsm3-201ENSMUST00000063770 2651 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
Upf1Q9EPU0 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
Upf1Q9EPU0 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
Upf1Q9EPU0 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
Upf1Q9EPU0 Gm26077-201ENSMUST00000104064 123 ntBASIC3.09□□□□□ -1.91
Upf1Q9EPU0 Gm12941-201ENSMUST00000117934 220 ntBASIC3.09□□□□□ -1.91
Upf1Q9EPU0 Gm25961-201ENSMUST00000157174 135 ntBASIC3.09□□□□□ -1.91
Upf1Q9EPU0 Gm22476-201ENSMUST00000158902 100 ntBASIC3.09□□□□□ -1.91
Upf1Q9EPU0 Gm24813-201ENSMUST00000175310 84 ntBASIC3.09□□□□□ -1.91
Upf1Q9EPU0 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC3.09□□□□□ -1.91
Upf1Q9EPU0 Gm28647-201ENSMUST00000188416 197 ntBASIC3.09□□□□□ -1.91
Upf1Q9EPU0 AC126672.1-201ENSMUST00000217096 396 ntBASIC3.09□□□□□ -1.91
Upf1Q9EPU0 Slain1os-201ENSMUST00000160117 3101 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
Upf1Q9EPU0 Olfr218-203ENSMUST00000216603 3623 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
Upf1Q9EPU0 Vmn1r75-206ENSMUST00000228463 6508 ntAPPRIS P2 BASIC3.09□□□□□ -1.92
Upf1Q9EPU0 Vmn1r80-205ENSMUST00000227755 10455 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
Upf1Q9EPU0 Olfr1044-202ENSMUST00000215171 3266 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Upf1Q9EPU0 Gpr22-201ENSMUST00000057783 4587 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
Upf1Q9EPU0 Gm19965-201ENSMUST00000179777 3030 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Upf1Q9EPU0 Mir542-201ENSMUST00000102186 85 ntBASIC3.08□□□□□ -1.92
Upf1Q9EPU0 Mir878-201ENSMUST00000104680 78 ntBASIC3.08□□□□□ -1.92
Upf1Q9EPU0 Gm13913-201ENSMUST00000121126 260 ntBASIC3.08□□□□□ -1.92
Upf1Q9EPU0 Gm13560-201ENSMUST00000121865 329 ntBASIC3.08□□□□□ -1.92
Upf1Q9EPU0 Gm22586-201ENSMUST00000157507 122 ntBASIC3.08□□□□□ -1.92
Upf1Q9EPU0 Gm24390-201ENSMUST00000179578 62 ntBASIC3.08□□□□□ -1.92
Upf1Q9EPU0 Mir8119-201ENSMUST00000183371 129 ntBASIC3.08□□□□□ -1.92
Upf1Q9EPU0 Gm27700-201ENSMUST00000185003 81 ntBASIC3.08□□□□□ -1.92
Upf1Q9EPU0 AC127371.1-202ENSMUST00000228923 306 ntBASIC3.08□□□□□ -1.92
Upf1Q9EPU0 Mir29c-201ENSMUST00000083614 88 ntBASIC3.08□□□□□ -1.92
Upf1Q9EPU0 Gm37602-201ENSMUST00000195187 3310 ntBASIC3.08□□□□□ -1.92
Upf1Q9EPU0 Olfr1208-202ENSMUST00000214121 2823 ntAPPRIS P1 TSL 3 BASIC3.07□□□□□ -1.92
Upf1Q9EPU0 Snord93-201ENSMUST00000175580 71 ntBASIC3.07□□□□□ -1.92
Upf1Q9EPU0 Gm43749-201ENSMUST00000199345 352 ntBASIC3.07□□□□□ -1.92
Upf1Q9EPU0 Gm45654-201ENSMUST00000210980 123 ntBASIC3.07□□□□□ -1.92
Upf1Q9EPU0 Pcdh11x-206ENSMUST00000192677 9097 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
Upf1Q9EPU0 Naaladl2-202ENSMUST00000203414 9330 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Upf1Q9EPU0 Gm42635-201ENSMUST00000200266 2571 ntBASIC3.06□□□□□ -1.92
Upf1Q9EPU0 n-R5s158-201ENSMUST00000104095 118 ntBASIC3.06□□□□□ -1.92
Upf1Q9EPU0 Gm6444-201ENSMUST00000119611 458 ntBASIC3.06□□□□□ -1.92
Upf1Q9EPU0 Gm22961-201ENSMUST00000157964 106 ntBASIC3.06□□□□□ -1.92
Upf1Q9EPU0 Gm23665-201ENSMUST00000158054 62 ntBASIC3.06□□□□□ -1.92
Upf1Q9EPU0 Gm16162-201ENSMUST00000162296 297 ntBASIC3.06□□□□□ -1.92
Upf1Q9EPU0 Gm37807-201ENSMUST00000194310 190 ntBASIC3.06□□□□□ -1.92
Upf1Q9EPU0 Gm44478-201ENSMUST00000204875 114 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 84.3 ms