Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gm25170-201ENSMUST00000104191 129 ntBASIC1.01□□□□□ -2.25
Cdc40Q9DC48 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC1.01□□□□□ -2.25
Cdc40Q9DC48 Gm13625-201ENSMUST00000149283 480 ntTSL 5 BASIC1.01□□□□□ -2.25
Cdc40Q9DC48 Gm24942-201ENSMUST00000158328 114 ntBASIC1.01□□□□□ -2.25
Cdc40Q9DC48 Gm23340-201ENSMUST00000158955 123 ntBASIC1.01□□□□□ -2.25
Cdc40Q9DC48 Gm20462-201ENSMUST00000172623 408 ntBASIC1.01□□□□□ -2.25
Cdc40Q9DC48 Gm27236-201ENSMUST00000184147 442 ntBASIC1.01□□□□□ -2.25
Cdc40Q9DC48 CT009696.1-201ENSMUST00000215745 256 ntBASIC1.01□□□□□ -2.25
Cdc40Q9DC48 AC164086.1-201ENSMUST00000221038 289 ntBASIC1.01□□□□□ -2.25
Cdc40Q9DC48 AC173345.2-201ENSMUST00000222795 153 ntBASIC1.01□□□□□ -2.25
Cdc40Q9DC48 CT485612.2-201ENSMUST00000223014 151 ntBASIC1.01□□□□□ -2.25
Cdc40Q9DC48 CT009713.9-201ENSMUST00000223604 389 ntBASIC1.01□□□□□ -2.25
Cdc40Q9DC48 AC183092.1-201ENSMUST00000224301 153 ntBASIC1.01□□□□□ -2.25
Cdc40Q9DC48 CT025630.1-201ENSMUST00000227901 172 ntBASIC1.01□□□□□ -2.25
Cdc40Q9DC48 Snora41-201ENSMUST00000082668 132 ntBASIC1.01□□□□□ -2.25
Cdc40Q9DC48 Gm26074-201ENSMUST00000104063 129 ntBASIC1□□□□□ -2.25
Cdc40Q9DC48 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC1□□□□□ -2.25
Cdc40Q9DC48 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC1□□□□□ -2.25
Cdc40Q9DC48 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC1□□□□□ -2.25
Cdc40Q9DC48 Gm22279-201ENSMUST00000157200 93 ntBASIC1□□□□□ -2.25
Cdc40Q9DC48 Gm24498-201ENSMUST00000158445 102 ntBASIC1□□□□□ -2.25
Cdc40Q9DC48 Gm26213-201ENSMUST00000158582 110 ntBASIC1□□□□□ -2.25
Cdc40Q9DC48 Mir1954-201ENSMUST00000175595 86 ntBASIC1□□□□□ -2.25
Cdc40Q9DC48 Mir7091-201ENSMUST00000184075 79 ntBASIC1□□□□□ -2.25
Cdc40Q9DC48 Gm10105-201ENSMUST00000184601 270 ntBASIC1□□□□□ -2.25
Cdc40Q9DC48 Gm43602-201ENSMUST00000196772 300 ntBASIC1□□□□□ -2.25
Cdc40Q9DC48 AC125020.2-201ENSMUST00000218894 348 ntBASIC1□□□□□ -2.25
Cdc40Q9DC48 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC1□□□□□ -2.25
Cdc40Q9DC48 Rny3-201ENSMUST00000083011 102 ntBASIC1□□□□□ -2.25
Cdc40Q9DC48 Gm25513-201ENSMUST00000083861 162 ntBASIC1□□□□□ -2.25
Cdc40Q9DC48 Olfr1109-202ENSMUST00000214636 2483 ntAPPRIS P1 TSL 5 BASIC1□□□□□ -2.25
Cdc40Q9DC48 Gm18795-202ENSMUST00000223373 2920 ntBASIC1□□□□□ -2.25
Cdc40Q9DC48 Gm15102-201ENSMUST00000118740 1502 ntBASIC0.99□□□□□ -2.25
Cdc40Q9DC48 Gm15101-201ENSMUST00000178818 1502 ntBASIC0.99□□□□□ -2.25
Cdc40Q9DC48 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC0.99□□□□□ -2.25
Cdc40Q9DC48 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
Cdc40Q9DC48 Gm23142-201ENSMUST00000101848 105 ntBASIC0.99□□□□□ -2.25
Cdc40Q9DC48 Gm26240-201ENSMUST00000101893 105 ntBASIC0.99□□□□□ -2.25
Cdc40Q9DC48 Gm25274-201ENSMUST00000104296 135 ntBASIC0.99□□□□□ -2.25
Cdc40Q9DC48 Gm11798-201ENSMUST00000119150 421 ntBASIC0.99□□□□□ -2.25
Cdc40Q9DC48 Gm26089-201ENSMUST00000157898 107 ntBASIC0.99□□□□□ -2.25
Cdc40Q9DC48 Gm22113-201ENSMUST00000158343 104 ntBASIC0.99□□□□□ -2.25
Cdc40Q9DC48 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC0.99□□□□□ -2.25
Cdc40Q9DC48 Gm24799-201ENSMUST00000178431 79 ntBASIC0.99□□□□□ -2.25
Cdc40Q9DC48 Gm26200-201ENSMUST00000180273 79 ntBASIC0.99□□□□□ -2.25
Cdc40Q9DC48 Mir6381-201ENSMUST00000183426 87 ntBASIC0.99□□□□□ -2.25
Cdc40Q9DC48 Gm28489-201ENSMUST00000186655 316 ntBASIC0.99□□□□□ -2.25
Cdc40Q9DC48 AC170600.1-201ENSMUST00000228763 277 ntBASIC0.99□□□□□ -2.25
Cdc40Q9DC48 Gm24152-201ENSMUST00000082764 163 ntBASIC0.99□□□□□ -2.25
Cdc40Q9DC48 Gm24356-201ENSMUST00000082859 106 ntBASIC0.99□□□□□ -2.25
Cdc40Q9DC48 Gm25789-201ENSMUST00000083294 76 ntBASIC0.99□□□□□ -2.25
Cdc40Q9DC48 Gm23705-201ENSMUST00000104370 130 ntBASIC0.98□□□□□ -2.25
Cdc40Q9DC48 Gm12143-201ENSMUST00000119666 332 ntBASIC0.98□□□□□ -2.25
Cdc40Q9DC48 4930511O05Rik-201ENSMUST00000155912 391 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
Cdc40Q9DC48 Gm24777-201ENSMUST00000157644 107 ntBASIC0.98□□□□□ -2.25
Cdc40Q9DC48 Mir7663-201ENSMUST00000183950 61 ntBASIC0.98□□□□□ -2.25
Cdc40Q9DC48 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC0.98□□□□□ -2.25
Cdc40Q9DC48 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC0.98□□□□□ -2.25
Cdc40Q9DC48 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC0.98□□□□□ -2.25
Cdc40Q9DC48 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC0.98□□□□□ -2.25
Cdc40Q9DC48 Gm26107-201ENSMUST00000083972 107 ntBASIC0.98□□□□□ -2.25
Cdc40Q9DC48 Gm24163-201ENSMUST00000093660 132 ntBASIC0.98□□□□□ -2.25
Cdc40Q9DC48 Rgs13-201ENSMUST00000052375 1510 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
Cdc40Q9DC48 Gm24588-201ENSMUST00000116696 83 ntBASIC0.97□□□□□ -2.25
Cdc40Q9DC48 Gm14923-201ENSMUST00000118270 155 ntBASIC0.97□□□□□ -2.25
Cdc40Q9DC48 Gm13518-201ENSMUST00000120018 233 ntBASIC0.97□□□□□ -2.25
Cdc40Q9DC48 n-R5s188-201ENSMUST00000122646 105 ntBASIC0.97□□□□□ -2.25
Cdc40Q9DC48 Gm22233-201ENSMUST00000157464 114 ntBASIC0.97□□□□□ -2.25
Cdc40Q9DC48 Gm25884-201ENSMUST00000157782 62 ntBASIC0.97□□□□□ -2.25
Cdc40Q9DC48 Gm22447-201ENSMUST00000158155 92 ntBASIC0.97□□□□□ -2.25
Cdc40Q9DC48 Gm25868-201ENSMUST00000158253 114 ntBASIC0.97□□□□□ -2.25
Cdc40Q9DC48 Gm25715-201ENSMUST00000158627 125 ntBASIC0.97□□□□□ -2.25
Cdc40Q9DC48 Gm24277-201ENSMUST00000158661 104 ntBASIC0.97□□□□□ -2.25
Cdc40Q9DC48 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC0.97□□□□□ -2.25
Cdc40Q9DC48 Gm28927-201ENSMUST00000191528 272 ntBASIC0.97□□□□□ -2.25
Cdc40Q9DC48 Gm28408-201ENSMUST00000191557 463 ntBASIC0.97□□□□□ -2.25
Cdc40Q9DC48 Gm44465-201ENSMUST00000199536 114 ntBASIC0.97□□□□□ -2.25
Cdc40Q9DC48 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC0.97□□□□□ -2.25
Cdc40Q9DC48 Gm45268-201ENSMUST00000210046 370 ntBASIC0.97□□□□□ -2.25
Cdc40Q9DC48 AC153526.1-201ENSMUST00000219750 190 ntBASIC0.97□□□□□ -2.25
Cdc40Q9DC48 Gm24625-201ENSMUST00000082622 130 ntBASIC0.97□□□□□ -2.25
Cdc40Q9DC48 Mir155-201ENSMUST00000083463 65 ntBASIC0.97□□□□□ -2.25
Cdc40Q9DC48 Mir496a-201ENSMUST00000093627 79 ntBASIC0.97□□□□□ -2.25
Cdc40Q9DC48 Gm44177-201ENSMUST00000204338 2667 ntBASIC0.96□□□□□ -2.26
Cdc40Q9DC48 Sval2-202ENSMUST00000119995 463 ntTSL 3 BASIC0.96□□□□□ -2.26
Cdc40Q9DC48 Gm14773-201ENSMUST00000125932 451 ntTSL 2 BASIC0.96□□□□□ -2.26
Cdc40Q9DC48 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC0.96□□□□□ -2.26
Cdc40Q9DC48 Gm7958-201ENSMUST00000178255 468 ntBASIC0.96□□□□□ -2.26
Cdc40Q9DC48 Gm7950-201ENSMUST00000179633 468 ntBASIC0.96□□□□□ -2.26
Cdc40Q9DC48 Gm24020-201ENSMUST00000180156 108 ntBASIC0.96□□□□□ -2.26
Cdc40Q9DC48 Il6st-202ENSMUST00000183513 201 ntTSL 5 BASIC0.96□□□□□ -2.26
Cdc40Q9DC48 Gm27317-201ENSMUST00000183533 95 ntBASIC0.96□□□□□ -2.26
Cdc40Q9DC48 Mir7039-201ENSMUST00000183852 85 ntBASIC0.96□□□□□ -2.26
Cdc40Q9DC48 Gm27419-201ENSMUST00000184576 109 ntBASIC0.96□□□□□ -2.26
Cdc40Q9DC48 Gm29242-201ENSMUST00000186570 457 ntTSL 5 BASIC0.96□□□□□ -2.26
Cdc40Q9DC48 Gm36953-201ENSMUST00000195295 268 ntBASIC0.96□□□□□ -2.26
Cdc40Q9DC48 Mir7661-201ENSMUST00000197023 61 ntBASIC0.96□□□□□ -2.26
Cdc40Q9DC48 AC125311.1-201ENSMUST00000226950 220 ntBASIC0.96□□□□□ -2.26
Cdc40Q9DC48 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
Cdc40Q9DC48 Mir32-201ENSMUST00000083610 70 ntBASIC0.96□□□□□ -2.26
Retrieved 100 of 76,532 protein–RNA pairs in 82 ms