Protein–RNA interactions for Protein: Q9D6Y1

Ccdc3, Coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3Q9D6Y1 Snord98-201ENSMUST00000116819 65 ntBASIC0.75□□□□□ -2.29
Ccdc3Q9D6Y1 Gm14293-201ENSMUST00000118528 577 ntBASIC0.75□□□□□ -2.29
Ccdc3Q9D6Y1 Gm24005-201ENSMUST00000158459 296 ntBASIC0.75□□□□□ -2.29
Ccdc3Q9D6Y1 Selenok-ps4-201ENSMUST00000178835 277 ntBASIC0.75□□□□□ -2.29
Ccdc3Q9D6Y1 Gm45402-201ENSMUST00000211796 223 ntBASIC0.75□□□□□ -2.29
Ccdc3Q9D6Y1 AC116589.9-201ENSMUST00000221462 908 ntBASIC0.75□□□□□ -2.29
Ccdc3Q9D6Y1 AC117202.2-201ENSMUST00000226491 1101 ntBASIC0.75□□□□□ -2.29
Ccdc3Q9D6Y1 Snord35a-201ENSMUST00000083884 90 ntBASIC0.75□□□□□ -2.29
Ccdc3Q9D6Y1 Mir872-201ENSMUST00000104728 81 ntBASIC0.74□□□□□ -2.29
Ccdc3Q9D6Y1 Gm11386-201ENSMUST00000117761 347 ntBASIC0.74□□□□□ -2.29
Ccdc3Q9D6Y1 Gm11991-201ENSMUST00000119652 1074 ntBASIC0.74□□□□□ -2.29
Ccdc3Q9D6Y1 Gm15899-201ENSMUST00000128586 238 ntBASIC0.74□□□□□ -2.29
Ccdc3Q9D6Y1 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
Ccdc3Q9D6Y1 Gm27926-201ENSMUST00000157180 66 ntBASIC0.74□□□□□ -2.29
Ccdc3Q9D6Y1 Gm20630-201ENSMUST00000177387 551 ntBASIC0.74□□□□□ -2.29
Ccdc3Q9D6Y1 Gm27420-201ENSMUST00000183823 79 ntBASIC0.74□□□□□ -2.29
Ccdc3Q9D6Y1 Gm43602-201ENSMUST00000196772 300 ntBASIC0.74□□□□□ -2.29
Ccdc3Q9D6Y1 Vmn1r230-201ENSMUST00000053974 951 ntAPPRIS P1 BASIC0.74□□□□□ -2.29
Ccdc3Q9D6Y1 Gm23097-201ENSMUST00000083448 105 ntBASIC0.74□□□□□ -2.29
Ccdc3Q9D6Y1 Gm26164-201ENSMUST00000083793 104 ntBASIC0.74□□□□□ -2.29
Ccdc3Q9D6Y1 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC0.73□□□□□ -2.29
Ccdc3Q9D6Y1 Gm22935-201ENSMUST00000103960 104 ntBASIC0.73□□□□□ -2.29
Ccdc3Q9D6Y1 Gm23126-201ENSMUST00000104260 134 ntBASIC0.73□□□□□ -2.29
Ccdc3Q9D6Y1 Gm23321-201ENSMUST00000104465 126 ntBASIC0.73□□□□□ -2.29
Ccdc3Q9D6Y1 Mir1b-201ENSMUST00000117012 122 ntBASIC0.73□□□□□ -2.29
Ccdc3Q9D6Y1 Gm23106-201ENSMUST00000157554 101 ntBASIC0.73□□□□□ -2.29
Ccdc3Q9D6Y1 Gm23783-201ENSMUST00000157941 102 ntBASIC0.73□□□□□ -2.29
Ccdc3Q9D6Y1 Gm25434-201ENSMUST00000158278 167 ntBASIC0.73□□□□□ -2.29
Ccdc3Q9D6Y1 Gm22403-201ENSMUST00000174919 84 ntBASIC0.73□□□□□ -2.29
Ccdc3Q9D6Y1 Gm24323-201ENSMUST00000175342 77 ntBASIC0.73□□□□□ -2.29
Ccdc3Q9D6Y1 Gm27313-201ENSMUST00000183500 142 ntBASIC0.73□□□□□ -2.29
Ccdc3Q9D6Y1 Mir7079-201ENSMUST00000184697 69 ntBASIC0.73□□□□□ -2.29
Ccdc3Q9D6Y1 Gm28257-201ENSMUST00000185244 463 ntBASIC0.73□□□□□ -2.29
Ccdc3Q9D6Y1 Mir219b-201ENSMUST00000198317 65 ntBASIC0.73□□□□□ -2.29
Ccdc3Q9D6Y1 Gm44052-201ENSMUST00000203382 396 ntBASIC0.73□□□□□ -2.29
Ccdc3Q9D6Y1 AC164612.2-202ENSMUST00000216314 253 ntBASIC0.73□□□□□ -2.29
Ccdc3Q9D6Y1 AC125020.2-201ENSMUST00000218894 348 ntBASIC0.73□□□□□ -2.29
Ccdc3Q9D6Y1 AC164086.1-201ENSMUST00000221038 289 ntBASIC0.73□□□□□ -2.29
Ccdc3Q9D6Y1 AC116589.3-202ENSMUST00000221770 649 ntBASIC0.73□□□□□ -2.29
Ccdc3Q9D6Y1 AC116589.6-201ENSMUST00000222252 649 ntBASIC0.73□□□□□ -2.29
Ccdc3Q9D6Y1 AC114916.1-201ENSMUST00000228465 494 ntBASIC0.73□□□□□ -2.29
Ccdc3Q9D6Y1 n-R5s96-201ENSMUST00000082574 124 ntBASIC0.73□□□□□ -2.29
Ccdc3Q9D6Y1 Gm22685-201ENSMUST00000082848 106 ntBASIC0.73□□□□□ -2.29
Ccdc3Q9D6Y1 Gm24355-201ENSMUST00000082858 122 ntBASIC0.73□□□□□ -2.29
Ccdc3Q9D6Y1 Gm24038-201ENSMUST00000082872 159 ntBASIC0.73□□□□□ -2.29
Ccdc3Q9D6Y1 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC0.72□□□□□ -2.29
Ccdc3Q9D6Y1 Gm22656-201ENSMUST00000104199 171 ntBASIC0.72□□□□□ -2.29
Ccdc3Q9D6Y1 Gm11042-201ENSMUST00000110441 120 ntAPPRIS P1 TSL 5 BASIC0.72□□□□□ -2.29
Ccdc3Q9D6Y1 Gm14782-201ENSMUST00000120151 195 ntBASIC0.72□□□□□ -2.29
Ccdc3Q9D6Y1 Gm13729-201ENSMUST00000120328 406 ntBASIC0.72□□□□□ -2.29
Ccdc3Q9D6Y1 Gm13967-201ENSMUST00000120404 380 ntBASIC0.72□□□□□ -2.29
Ccdc3Q9D6Y1 Gm11792-201ENSMUST00000120640 168 ntBASIC0.72□□□□□ -2.29
Ccdc3Q9D6Y1 Defb44-ps-201ENSMUST00000126871 219 ntBASIC0.72□□□□□ -2.29
Ccdc3Q9D6Y1 Gm23169-201ENSMUST00000157157 112 ntBASIC0.72□□□□□ -2.29
Ccdc3Q9D6Y1 Gm22281-201ENSMUST00000157198 103 ntBASIC0.72□□□□□ -2.29
Ccdc3Q9D6Y1 Gm24393-201ENSMUST00000158135 97 ntBASIC0.72□□□□□ -2.29
Ccdc3Q9D6Y1 Mir344d-3-201ENSMUST00000175458 80 ntBASIC0.72□□□□□ -2.29
Ccdc3Q9D6Y1 AC173345.2-201ENSMUST00000222795 153 ntBASIC0.72□□□□□ -2.29
Ccdc3Q9D6Y1 AC173482.5-201ENSMUST00000224181 327 ntBASIC0.72□□□□□ -2.29
Ccdc3Q9D6Y1 AC183092.1-201ENSMUST00000224301 153 ntBASIC0.72□□□□□ -2.29
Ccdc3Q9D6Y1 AC167192.2-201ENSMUST00000224794 198 ntBASIC0.72□□□□□ -2.29
Ccdc3Q9D6Y1 Gm23735-201ENSMUST00000082551 134 ntBASIC0.72□□□□□ -2.29
Ccdc3Q9D6Y1 AC121844.2-201ENSMUST00000219067 2066 ntBASIC0.72□□□□□ -2.29
Ccdc3Q9D6Y1 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC0.71□□□□□ -2.3
Ccdc3Q9D6Y1 Gm11254-201ENSMUST00000122368 653 ntBASIC0.71□□□□□ -2.3
Ccdc3Q9D6Y1 Gm22985-201ENSMUST00000122754 116 ntBASIC0.71□□□□□ -2.3
Ccdc3Q9D6Y1 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC0.71□□□□□ -2.3
Ccdc3Q9D6Y1 Gm45488-201ENSMUST00000210747 371 ntTSL 3 BASIC0.71□□□□□ -2.3
Ccdc3Q9D6Y1 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC0.71□□□□□ -2.3
Ccdc3Q9D6Y1 AC100209.2-201ENSMUST00000224461 451 ntBASIC0.71□□□□□ -2.3
Ccdc3Q9D6Y1 Olfr831-ps1-201ENSMUST00000086496 890 ntBASIC0.71□□□□□ -2.3
Ccdc3Q9D6Y1 Gm14287-201ENSMUST00000121060 117 ntBASIC0.7□□□□□ -2.3
Ccdc3Q9D6Y1 Gm25011-201ENSMUST00000158398 126 ntBASIC0.7□□□□□ -2.3
Ccdc3Q9D6Y1 Gm24487-201ENSMUST00000178017 63 ntBASIC0.7□□□□□ -2.3
Ccdc3Q9D6Y1 Gm27793-201ENSMUST00000183405 76 ntBASIC0.7□□□□□ -2.3
Ccdc3Q9D6Y1 Gm28217-201ENSMUST00000188613 648 ntTSL 5 BASIC0.7□□□□□ -2.3
Ccdc3Q9D6Y1 Gm28992-201ENSMUST00000190534 139 ntBASIC0.7□□□□□ -2.3
Ccdc3Q9D6Y1 Gm42719-201ENSMUST00000197393 355 ntBASIC0.7□□□□□ -2.3
Ccdc3Q9D6Y1 AC125167.1-201ENSMUST00000198698 141 ntBASIC0.7□□□□□ -2.3
Ccdc3Q9D6Y1 Gm20144-201ENSMUST00000203031 165 ntBASIC0.7□□□□□ -2.3
Ccdc3Q9D6Y1 Gm45556-201ENSMUST00000210689 345 ntTSL 5 BASIC0.7□□□□□ -2.3
Ccdc3Q9D6Y1 Olfr1317-201ENSMUST00000060098 951 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
Ccdc3Q9D6Y1 Gm9795-201ENSMUST00000062156 693 ntBASIC0.7□□□□□ -2.3
Ccdc3Q9D6Y1 Gm4746-201ENSMUST00000120395 2406 ntBASIC0.7□□□□□ -2.3
Ccdc3Q9D6Y1 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC0.69□□□□□ -2.3
Ccdc3Q9D6Y1 Gm14922-201ENSMUST00000121131 163 ntBASIC0.69□□□□□ -2.3
Ccdc3Q9D6Y1 Gm23059-201ENSMUST00000158978 107 ntBASIC0.69□□□□□ -2.3
Ccdc3Q9D6Y1 Gm20386-201ENSMUST00000174010 132 ntBASIC0.69□□□□□ -2.3
Ccdc3Q9D6Y1 Gm24618-201ENSMUST00000177718 94 ntBASIC0.69□□□□□ -2.3
Ccdc3Q9D6Y1 Gm23953-201ENSMUST00000178214 94 ntBASIC0.69□□□□□ -2.3
Ccdc3Q9D6Y1 Gm26332-201ENSMUST00000179813 94 ntBASIC0.69□□□□□ -2.3
Ccdc3Q9D6Y1 Gm22863-201ENSMUST00000180265 94 ntBASIC0.69□□□□□ -2.3
Ccdc3Q9D6Y1 Gm25284-201ENSMUST00000180345 141 ntBASIC0.69□□□□□ -2.3
Ccdc3Q9D6Y1 Gm27545-201ENSMUST00000184755 202 ntBASIC0.69□□□□□ -2.3
Ccdc3Q9D6Y1 Gm37918-201ENSMUST00000192071 120 ntBASIC0.69□□□□□ -2.3
Ccdc3Q9D6Y1 Gm38113-201ENSMUST00000193704 201 ntBASIC0.69□□□□□ -2.3
Ccdc3Q9D6Y1 Gm44462-201ENSMUST00000199696 129 ntBASIC0.69□□□□□ -2.3
Ccdc3Q9D6Y1 Gm44960-201ENSMUST00000207403 141 ntBASIC0.69□□□□□ -2.3
Ccdc3Q9D6Y1 Gm44811-201ENSMUST00000209120 228 ntBASIC0.69□□□□□ -2.3
Ccdc3Q9D6Y1 Gm23627-201ENSMUST00000082459 107 ntBASIC0.69□□□□□ -2.3
Retrieved 100 of 76,532 protein–RNA pairs in 89.9 ms