Protein–RNA interactions for Protein: Q9D5Y1

Ccdc39, Coiled-coil domain-containing protein 39, mousemouse

Predictions only

Length 937 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc39Q9D5Y1 Gm24799-201ENSMUST00000178431 79 ntBASIC1.82□□□□□ -2.12
Ccdc39Q9D5Y1 Gm26060-201ENSMUST00000180094 123 ntBASIC1.82□□□□□ -2.12
Ccdc39Q9D5Y1 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
Ccdc39Q9D5Y1 Gm29242-201ENSMUST00000186570 457 ntTSL 5 BASIC1.82□□□□□ -2.12
Ccdc39Q9D5Y1 Tmem167-ps2-201ENSMUST00000190251 214 ntBASIC1.82□□□□□ -2.12
Ccdc39Q9D5Y1 Gm44482-201ENSMUST00000199232 103 ntBASIC1.82□□□□□ -2.12
Ccdc39Q9D5Y1 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC1.82□□□□□ -2.12
Ccdc39Q9D5Y1 Gm29818-201ENSMUST00000218070 165 ntBASIC1.82□□□□□ -2.12
Ccdc39Q9D5Y1 AC100209.2-201ENSMUST00000224461 451 ntBASIC1.82□□□□□ -2.12
Ccdc39Q9D5Y1 CT485608.2-201ENSMUST00000227210 291 ntBASIC1.82□□□□□ -2.12
Ccdc39Q9D5Y1 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
Ccdc39Q9D5Y1 Gm26497-201ENSMUST00000083146 107 ntBASIC1.82□□□□□ -2.12
Ccdc39Q9D5Y1 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Ccdc39Q9D5Y1 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
Ccdc39Q9D5Y1 Olfr935-202ENSMUST00000214157 1693 ntAPPRIS P1 TSL 3 BASIC1.81□□□□□ -2.12
Ccdc39Q9D5Y1 n-R5s67-201ENSMUST00000104336 114 ntBASIC1.81□□□□□ -2.12
Ccdc39Q9D5Y1 Gm14773-201ENSMUST00000125932 451 ntTSL 2 BASIC1.81□□□□□ -2.12
Ccdc39Q9D5Y1 Gm23983-201ENSMUST00000157142 114 ntBASIC1.81□□□□□ -2.12
Ccdc39Q9D5Y1 Gm22315-201ENSMUST00000158010 143 ntBASIC1.81□□□□□ -2.12
Ccdc39Q9D5Y1 Gm23542-201ENSMUST00000158208 96 ntBASIC1.81□□□□□ -2.12
Ccdc39Q9D5Y1 Gm24174-201ENSMUST00000158933 111 ntBASIC1.81□□□□□ -2.12
Ccdc39Q9D5Y1 Mir3086-201ENSMUST00000175072 87 ntBASIC1.81□□□□□ -2.12
Ccdc39Q9D5Y1 Gm23047-201ENSMUST00000177661 94 ntBASIC1.81□□□□□ -2.12
Ccdc39Q9D5Y1 Gm33866-201ENSMUST00000196911 289 ntBASIC1.81□□□□□ -2.12
Ccdc39Q9D5Y1 Klk1b28-ps-201ENSMUST00000206374 217 ntBASIC1.81□□□□□ -2.12
Ccdc39Q9D5Y1 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC1.81□□□□□ -2.12
Ccdc39Q9D5Y1 AL929417.1-201ENSMUST00000214901 124 ntBASIC1.81□□□□□ -2.12
Ccdc39Q9D5Y1 AC126672.1-201ENSMUST00000217096 396 ntBASIC1.81□□□□□ -2.12
Ccdc39Q9D5Y1 AL606472.1-201ENSMUST00000224628 275 ntBASIC1.81□□□□□ -2.12
Ccdc39Q9D5Y1 AC122834.1-201ENSMUST00000227182 425 ntBASIC1.81□□□□□ -2.12
Ccdc39Q9D5Y1 Olfr1317-201ENSMUST00000060098 951 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
Ccdc39Q9D5Y1 Gm24152-201ENSMUST00000082764 163 ntBASIC1.81□□□□□ -2.12
Ccdc39Q9D5Y1 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC1.81□□□□□ -2.12
Ccdc39Q9D5Y1 Gm15526-201ENSMUST00000112504 204 ntBASIC1.8□□□□□ -2.12
Ccdc39Q9D5Y1 Gm14674-201ENSMUST00000117816 342 ntBASIC1.8□□□□□ -2.12
Ccdc39Q9D5Y1 Gm22217-201ENSMUST00000157556 313 ntBASIC1.8□□□□□ -2.12
Ccdc39Q9D5Y1 Gm22338-201ENSMUST00000157715 129 ntBASIC1.8□□□□□ -2.12
Ccdc39Q9D5Y1 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC1.8□□□□□ -2.12
Ccdc39Q9D5Y1 Mir3961-201ENSMUST00000198795 59 ntBASIC1.8□□□□□ -2.12
Ccdc39Q9D5Y1 Gm42960-201ENSMUST00000202160 241 ntBASIC1.8□□□□□ -2.12
Ccdc39Q9D5Y1 AC123709.1-201ENSMUST00000224848 345 ntBASIC1.8□□□□□ -2.12
Ccdc39Q9D5Y1 Gm22299-201ENSMUST00000082663 136 ntBASIC1.8□□□□□ -2.12
Ccdc39Q9D5Y1 Gm10360-201ENSMUST00000097219 272 ntBASIC1.8□□□□□ -2.12
Ccdc39Q9D5Y1 Gm37061-201ENSMUST00000195066 3243 ntBASIC1.79□□□□□ -2.12
Ccdc39Q9D5Y1 Gm25362-201ENSMUST00000158854 105 ntBASIC1.79□□□□□ -2.12
Ccdc39Q9D5Y1 Gm25958-201ENSMUST00000175114 71 ntBASIC1.79□□□□□ -2.12
Ccdc39Q9D5Y1 Gm27402-201ENSMUST00000183890 120 ntBASIC1.79□□□□□ -2.12
Ccdc39Q9D5Y1 Mir3535-201ENSMUST00000197651 147 ntBASIC1.79□□□□□ -2.12
Ccdc39Q9D5Y1 AC164161.1-201ENSMUST00000214076 639 ntBASIC1.79□□□□□ -2.12
Ccdc39Q9D5Y1 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
Ccdc39Q9D5Y1 Gm25636-201ENSMUST00000082666 133 ntBASIC1.79□□□□□ -2.12
Ccdc39Q9D5Y1 AC102369.2-201ENSMUST00000219725 1679 ntBASIC1.78□□□□□ -2.12
Ccdc39Q9D5Y1 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
Ccdc39Q9D5Y1 Gm11936-201ENSMUST00000118323 160 ntBASIC1.78□□□□□ -2.12
Ccdc39Q9D5Y1 Gm24909-201ENSMUST00000157290 280 ntBASIC1.78□□□□□ -2.12
Ccdc39Q9D5Y1 Gm22215-201ENSMUST00000157558 96 ntBASIC1.78□□□□□ -2.12
Ccdc39Q9D5Y1 Gm22731-201ENSMUST00000158086 94 ntBASIC1.78□□□□□ -2.12
Ccdc39Q9D5Y1 Gm27265-201ENSMUST00000183559 77 ntBASIC1.78□□□□□ -2.12
Ccdc39Q9D5Y1 Igkv15-102-201ENSMUST00000197885 287 ntBASIC1.78□□□□□ -2.12
Ccdc39Q9D5Y1 Gm44384-201ENSMUST00000200208 114 ntBASIC1.78□□□□□ -2.12
Ccdc39Q9D5Y1 AC165157.3-201ENSMUST00000220815 103 ntBASIC1.78□□□□□ -2.12
Ccdc39Q9D5Y1 AC167669.4-201ENSMUST00000225967 140 ntBASIC1.78□□□□□ -2.12
Ccdc39Q9D5Y1 Gm25589-201ENSMUST00000082502 166 ntBASIC1.78□□□□□ -2.12
Ccdc39Q9D5Y1 Gm24805-201ENSMUST00000082931 104 ntBASIC1.78□□□□□ -2.12
Ccdc39Q9D5Y1 Gm23377-201ENSMUST00000082943 126 ntBASIC1.78□□□□□ -2.12
Ccdc39Q9D5Y1 Mir429-201ENSMUST00000083493 83 ntBASIC1.78□□□□□ -2.12
Ccdc39Q9D5Y1 Gm24522-201ENSMUST00000083964 108 ntBASIC1.78□□□□□ -2.12
Ccdc39Q9D5Y1 Gm10222-201ENSMUST00000088336 294 ntBASIC1.78□□□□□ -2.12
Ccdc39Q9D5Y1 Gm24896-201ENSMUST00000122741 135 ntBASIC1.77□□□□□ -2.13
Ccdc39Q9D5Y1 n-R5s187-201ENSMUST00000122769 111 ntBASIC1.77□□□□□ -2.13
Ccdc39Q9D5Y1 Gm25333-201ENSMUST00000158035 246 ntBASIC1.77□□□□□ -2.13
Ccdc39Q9D5Y1 Gm22537-201ENSMUST00000158172 199 ntBASIC1.77□□□□□ -2.13
Ccdc39Q9D5Y1 Gm22768-201ENSMUST00000158366 153 ntBASIC1.77□□□□□ -2.13
Ccdc39Q9D5Y1 Snord87-201ENSMUST00000175437 87 ntBASIC1.77□□□□□ -2.13
Ccdc39Q9D5Y1 Gm44429-201ENSMUST00000203542 186 ntBASIC1.77□□□□□ -2.13
Ccdc39Q9D5Y1 CT010454.1-201ENSMUST00000225975 265 ntBASIC1.77□□□□□ -2.13
Ccdc39Q9D5Y1 AC115735.2-201ENSMUST00000227135 351 ntBASIC1.77□□□□□ -2.13
Ccdc39Q9D5Y1 Olfr1208-202ENSMUST00000214121 2823 ntAPPRIS P1 TSL 3 BASIC1.77□□□□□ -2.13
Ccdc39Q9D5Y1 Gm4746-201ENSMUST00000120395 2406 ntBASIC1.76□□□□□ -2.13
Ccdc39Q9D5Y1 Mir466b-8-201ENSMUST00000103883 86 ntBASIC1.76□□□□□ -2.13
Ccdc39Q9D5Y1 Gm25875-201ENSMUST00000104323 107 ntBASIC1.76□□□□□ -2.13
Ccdc39Q9D5Y1 Gm22984-201ENSMUST00000122751 122 ntBASIC1.76□□□□□ -2.13
Ccdc39Q9D5Y1 Gm13569-201ENSMUST00000137221 574 ntTSL 3 BASIC1.76□□□□□ -2.13
Ccdc39Q9D5Y1 Gm23640-201ENSMUST00000157860 104 ntBASIC1.76□□□□□ -2.13
Ccdc39Q9D5Y1 Gm23181-201ENSMUST00000158685 110 ntBASIC1.76□□□□□ -2.13
Ccdc39Q9D5Y1 Gm16162-201ENSMUST00000162296 297 ntBASIC1.76□□□□□ -2.13
Ccdc39Q9D5Y1 Gm20613-201ENSMUST00000175828 345 ntBASIC1.76□□□□□ -2.13
Ccdc39Q9D5Y1 Snora15-201ENSMUST00000177461 131 ntBASIC1.76□□□□□ -2.13
Ccdc39Q9D5Y1 Gm27271-201ENSMUST00000183509 170 ntBASIC1.76□□□□□ -2.13
Ccdc39Q9D5Y1 Mir6336-201ENSMUST00000183581 130 ntBASIC1.76□□□□□ -2.13
Ccdc39Q9D5Y1 Gm27493-201ENSMUST00000184128 78 ntBASIC1.76□□□□□ -2.13
Ccdc39Q9D5Y1 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC1.76□□□□□ -2.13
Ccdc39Q9D5Y1 Gm19123-201ENSMUST00000190716 651 ntBASIC1.76□□□□□ -2.13
Ccdc39Q9D5Y1 Mir466e-201ENSMUST00000198862 84 ntBASIC1.76□□□□□ -2.13
Ccdc39Q9D5Y1 Mir466c-1-201ENSMUST00000200654 84 ntBASIC1.76□□□□□ -2.13
Ccdc39Q9D5Y1 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC1.76□□□□□ -2.13
Ccdc39Q9D5Y1 mt-Ti-201ENSMUST00000082393 69 ntBASIC1.76□□□□□ -2.13
Ccdc39Q9D5Y1 Gm24356-201ENSMUST00000082859 106 ntBASIC1.76□□□□□ -2.13
Ccdc39Q9D5Y1 Gm22294-201ENSMUST00000083308 104 ntBASIC1.76□□□□□ -2.13
Ccdc39Q9D5Y1 Olfr1044-202ENSMUST00000215171 3266 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
Retrieved 100 of 76,532 protein–RNA pairs in 84.2 ms