Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC3.25□□□□□ -1.89
Trim42Q9D2H5 Mir489-201ENSMUST00000093599 107 ntBASIC3.25□□□□□ -1.89
Trim42Q9D2H5 Gm38211-201ENSMUST00000192814 7217 ntBASIC3.25□□□□□ -1.89
Trim42Q9D2H5 Olfr364-ps1-203ENSMUST00000217298 2894 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Trim42Q9D2H5 BC022960-201ENSMUST00000119987 1815 ntBASIC3.24□□□□□ -1.89
Trim42Q9D2H5 Gm14811-201ENSMUST00000117070 117 ntBASIC3.24□□□□□ -1.89
Trim42Q9D2H5 Gm13274-202ENSMUST00000137624 271 ntTSL 3 BASIC3.24□□□□□ -1.89
Trim42Q9D2H5 Gm25825-201ENSMUST00000157091 124 ntBASIC3.24□□□□□ -1.89
Trim42Q9D2H5 Gm22800-201ENSMUST00000175627 94 ntBASIC3.24□□□□□ -1.89
Trim42Q9D2H5 Mir6975-201ENSMUST00000184879 61 ntBASIC3.24□□□□□ -1.89
Trim42Q9D2H5 Gm6801-201ENSMUST00000190697 339 ntBASIC3.24□□□□□ -1.89
Trim42Q9D2H5 Gm44921-201ENSMUST00000205290 301 ntBASIC3.24□□□□□ -1.89
Trim42Q9D2H5 Gm38083-201ENSMUST00000194758 3498 ntBASIC3.24□□□□□ -1.89
Trim42Q9D2H5 Gm45558-201ENSMUST00000209384 1895 ntBASIC3.24□□□□□ -1.89
Trim42Q9D2H5 Olfr789-201ENSMUST00000213236 4235 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Trim42Q9D2H5 Muc16-204ENSMUST00000208663 25437 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Trim42Q9D2H5 Traj24-201ENSMUST00000103717 63 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Trim42Q9D2H5 Gm14946-201ENSMUST00000119859 296 ntBASIC3.23□□□□□ -1.89
Trim42Q9D2H5 Vmn2r42-205ENSMUST00000146278 3086 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
Trim42Q9D2H5 Ranbp2-ps1-201ENSMUST00000184001 403 ntBASIC3.23□□□□□ -1.89
Trim42Q9D2H5 Gm27582-201ENSMUST00000184084 126 ntBASIC3.23□□□□□ -1.89
Trim42Q9D2H5 Gm38311-201ENSMUST00000192945 165 ntBASIC3.23□□□□□ -1.89
Trim42Q9D2H5 Mir1291-201ENSMUST00000199842 117 ntBASIC3.23□□□□□ -1.89
Trim42Q9D2H5 Gm44459-201ENSMUST00000203926 160 ntBASIC3.23□□□□□ -1.89
Trim42Q9D2H5 Olfr1309-202ENSMUST00000214537 4274 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Trim42Q9D2H5 Gm23738-201ENSMUST00000082828 171 ntBASIC3.23□□□□□ -1.89
Trim42Q9D2H5 Snora34-201ENSMUST00000083402 138 ntBASIC3.23□□□□□ -1.89
Trim42Q9D2H5 Tlr3-202ENSMUST00000167106 4093 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Trim42Q9D2H5 Gm45038-201ENSMUST00000207537 3838 ntBASIC3.22□□□□□ -1.89
Trim42Q9D2H5 Gm26423-201ENSMUST00000104277 128 ntBASIC3.22□□□□□ -1.89
Trim42Q9D2H5 Gm22488-201ENSMUST00000116811 127 ntBASIC3.22□□□□□ -1.89
Trim42Q9D2H5 Gm22451-201ENSMUST00000122803 151 ntBASIC3.22□□□□□ -1.89
Trim42Q9D2H5 Gm24480-201ENSMUST00000157442 103 ntBASIC3.22□□□□□ -1.89
Trim42Q9D2H5 Gm23540-201ENSMUST00000157543 164 ntBASIC3.22□□□□□ -1.89
Trim42Q9D2H5 Snord11-201ENSMUST00000158468 84 ntBASIC3.22□□□□□ -1.89
Trim42Q9D2H5 Gm24572-201ENSMUST00000175505 88 ntBASIC3.22□□□□□ -1.89
Trim42Q9D2H5 Mir6350-201ENSMUST00000183639 105 ntBASIC3.22□□□□□ -1.89
Trim42Q9D2H5 Snord35b-201ENSMUST00000082833 87 ntBASIC3.22□□□□□ -1.89
Trim42Q9D2H5 Gm13479-201ENSMUST00000130773 4722 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Trim42Q9D2H5 Gm26573-201ENSMUST00000181199 3020 ntTSL 5 BASIC3.22□□□□□ -1.89
Trim42Q9D2H5 Gm15302-201ENSMUST00000117779 2630 ntBASIC3.22□□□□□ -1.89
Trim42Q9D2H5 Vmn1r46-206ENSMUST00000228401 10955 ntAPPRIS P1 BASIC3.21□□□□□ -1.89
Trim42Q9D2H5 Olfr166-202ENSMUST00000213531 4205 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.89
Trim42Q9D2H5 AC164164.1-201ENSMUST00000223245 2340 ntBASIC3.21□□□□□ -1.89
Trim42Q9D2H5 Slc16a7-206ENSMUST00000211781 10981 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Trim42Q9D2H5 Zfp985-201ENSMUST00000081742 2762 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Trim42Q9D2H5 Gm23084-201ENSMUST00000157850 114 ntBASIC3.21□□□□□ -1.9
Trim42Q9D2H5 AC125167.1-201ENSMUST00000198698 141 ntBASIC3.21□□□□□ -1.9
Trim42Q9D2H5 Gm44964-201ENSMUST00000207011 273 ntBASIC3.21□□□□□ -1.9
Trim42Q9D2H5 Gm23790-201ENSMUST00000083013 107 ntBASIC3.21□□□□□ -1.9
Trim42Q9D2H5 Gm23507-201ENSMUST00000083078 107 ntBASIC3.21□□□□□ -1.9
Trim42Q9D2H5 Mir9-2-201ENSMUST00000083490 72 ntBASIC3.21□□□□□ -1.9
Trim42Q9D2H5 Gm37515-201ENSMUST00000193321 3817 ntBASIC3.21□□□□□ -1.9
Trim42Q9D2H5 Adgrg4-204ENSMUST00000153784 9329 ntAPPRIS P5 TSL 5 BASIC3.2□□□□□ -1.9
Trim42Q9D2H5 Olfr25-203ENSMUST00000214155 6479 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
Trim42Q9D2H5 Gm9696-201ENSMUST00000094227 3050 ntTSL 2 BASIC3.2□□□□□ -1.9
Trim42Q9D2H5 Gm22658-201ENSMUST00000104196 155 ntBASIC3.2□□□□□ -1.9
Trim42Q9D2H5 Gm24792-201ENSMUST00000104286 128 ntBASIC3.2□□□□□ -1.9
Trim42Q9D2H5 Gm25012-201ENSMUST00000158396 164 ntBASIC3.2□□□□□ -1.9
Trim42Q9D2H5 Gm22853-201ENSMUST00000174974 131 ntBASIC3.2□□□□□ -1.9
Trim42Q9D2H5 Gm26864-201ENSMUST00000181346 156 ntBASIC3.2□□□□□ -1.9
Trim42Q9D2H5 Mir8096-201ENSMUST00000184526 127 ntBASIC3.2□□□□□ -1.9
Trim42Q9D2H5 AC126939.1-201ENSMUST00000224943 226 ntBASIC3.2□□□□□ -1.9
Trim42Q9D2H5 n-R5s85-201ENSMUST00000083453 113 ntBASIC3.2□□□□□ -1.9
Trim42Q9D2H5 Olfr143-202ENSMUST00000213129 3449 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
Trim42Q9D2H5 Adam5-201ENSMUST00000050300 2560 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
Trim42Q9D2H5 AC161254.1-201ENSMUST00000220310 3842 ntBASIC3.19□□□□□ -1.9
Trim42Q9D2H5 CT025538.3-201ENSMUST00000225279 3848 ntBASIC3.19□□□□□ -1.9
Trim42Q9D2H5 AC127302.3-201ENSMUST00000215480 2791 ntBASIC3.19□□□□□ -1.9
Trim42Q9D2H5 Gm25833-201ENSMUST00000104137 133 ntBASIC3.19□□□□□ -1.9
Trim42Q9D2H5 Gm23755-201ENSMUST00000157578 343 ntBASIC3.19□□□□□ -1.9
Trim42Q9D2H5 Gm22532-201ENSMUST00000158822 140 ntBASIC3.19□□□□□ -1.9
Trim42Q9D2H5 Gm27392-201ENSMUST00000185041 101 ntBASIC3.19□□□□□ -1.9
Trim42Q9D2H5 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC3.19□□□□□ -1.9
Trim42Q9D2H5 Gm32250-201ENSMUST00000191885 322 ntTSL 3 BASIC3.19□□□□□ -1.9
Trim42Q9D2H5 Olfr865-ps1-201ENSMUST00000212071 85 ntBASIC3.19□□□□□ -1.9
Trim42Q9D2H5 Gm21007-201ENSMUST00000221024 326 ntBASIC3.19□□□□□ -1.9
Trim42Q9D2H5 AC122465.2-201ENSMUST00000221774 354 ntBASIC3.19□□□□□ -1.9
Trim42Q9D2H5 Gm31025-201ENSMUST00000222553 482 ntTSL 5 BASIC3.19□□□□□ -1.9
Trim42Q9D2H5 Gm6030-201ENSMUST00000078768 402 ntBASIC3.19□□□□□ -1.9
Trim42Q9D2H5 Vmn1r29-203ENSMUST00000227761 4671 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Trim42Q9D2H5 Vmn1r29-205ENSMUST00000228909 4658 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Trim42Q9D2H5 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
Trim42Q9D2H5 Ctdspl2-202ENSMUST00000110572 4160 ntTSL 5 BASIC3.18□□□□□ -1.9
Trim42Q9D2H5 Gm22935-201ENSMUST00000103960 104 ntBASIC3.18□□□□□ -1.9
Trim42Q9D2H5 Gm24126-201ENSMUST00000104111 106 ntBASIC3.18□□□□□ -1.9
Trim42Q9D2H5 Gm16171-201ENSMUST00000118004 324 ntBASIC3.18□□□□□ -1.9
Trim42Q9D2H5 Defa-ps9-201ENSMUST00000118264 276 ntBASIC3.18□□□□□ -1.9
Trim42Q9D2H5 Gm12335-201ENSMUST00000119738 327 ntBASIC3.18□□□□□ -1.9
Trim42Q9D2H5 Atp5k-ps2-201ENSMUST00000120437 210 ntBASIC3.18□□□□□ -1.9
Trim42Q9D2H5 Mir6907-201ENSMUST00000183764 71 ntBASIC3.18□□□□□ -1.9
Trim42Q9D2H5 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC3.18□□□□□ -1.9
Trim42Q9D2H5 Gm45288-201ENSMUST00000210236 151 ntBASIC3.18□□□□□ -1.9
Trim42Q9D2H5 AC136976.1-201ENSMUST00000221440 381 ntTSL 3 BASIC3.18□□□□□ -1.9
Trim42Q9D2H5 AC183096.1-201ENSMUST00000226392 130 ntBASIC3.18□□□□□ -1.9
Trim42Q9D2H5 AC161250.2-201ENSMUST00000215114 3107 ntBASIC3.18□□□□□ -1.9
Trim42Q9D2H5 AC154386.1-201ENSMUST00000222753 2871 ntBASIC3.18□□□□□ -1.9
Trim42Q9D2H5 Ifi203-201ENSMUST00000042228 3754 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
Trim42Q9D2H5 AC159193.2-201ENSMUST00000220865 4251 ntBASIC3.17□□□□□ -1.9
Trim42Q9D2H5 Gm25420-201ENSMUST00000104216 127 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 81.8 ms