Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Mir669o-201ENSMUST00000103898 96 ntBASIC1.78□□□□□ -2.12
Vps28Q9D1C8 Gm25279-201ENSMUST00000122608 133 ntBASIC1.78□□□□□ -2.12
Vps28Q9D1C8 Gm22883-201ENSMUST00000157376 106 ntBASIC1.78□□□□□ -2.12
Vps28Q9D1C8 Gm22315-201ENSMUST00000158010 143 ntBASIC1.78□□□□□ -2.12
Vps28Q9D1C8 Gm24572-201ENSMUST00000175505 88 ntBASIC1.78□□□□□ -2.12
Vps28Q9D1C8 Gm28881-201ENSMUST00000187710 470 ntTSL 3 BASIC1.78□□□□□ -2.12
Vps28Q9D1C8 Gm37146-201ENSMUST00000192572 463 ntTSL 3 BASIC1.78□□□□□ -2.12
Vps28Q9D1C8 Mir221-201ENSMUST00000083488 95 ntBASIC1.78□□□□□ -2.12
Vps28Q9D1C8 Gm23345-201ENSMUST00000083817 150 ntBASIC1.78□□□□□ -2.12
Vps28Q9D1C8 Gm37602-201ENSMUST00000195187 3310 ntBASIC1.78□□□□□ -2.12
Vps28Q9D1C8 Olfr1013-202ENSMUST00000216397 4925 ntAPPRIS P1 TSL 2 BASIC1.77□□□□□ -2.13
Vps28Q9D1C8 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC1.77□□□□□ -2.13
Vps28Q9D1C8 Gm24283-201ENSMUST00000104233 107 ntBASIC1.77□□□□□ -2.13
Vps28Q9D1C8 Mir873a-201ENSMUST00000104863 77 ntBASIC1.77□□□□□ -2.13
Vps28Q9D1C8 Gm11794-201ENSMUST00000119446 237 ntBASIC1.77□□□□□ -2.13
Vps28Q9D1C8 Gm13967-201ENSMUST00000120404 380 ntBASIC1.77□□□□□ -2.13
Vps28Q9D1C8 Gm24847-201ENSMUST00000158032 108 ntBASIC1.77□□□□□ -2.13
Vps28Q9D1C8 Gm22448-201ENSMUST00000179254 107 ntBASIC1.77□□□□□ -2.13
Vps28Q9D1C8 Gm28537-201ENSMUST00000189026 315 ntBASIC1.77□□□□□ -2.13
Vps28Q9D1C8 Gm29631-201ENSMUST00000191065 315 ntBASIC1.77□□□□□ -2.13
Vps28Q9D1C8 Gm45005-201ENSMUST00000206640 157 ntBASIC1.77□□□□□ -2.13
Vps28Q9D1C8 Gm45754-201ENSMUST00000212380 279 ntBASIC1.77□□□□□ -2.13
Vps28Q9D1C8 AC152414.2-201ENSMUST00000219620 537 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
Vps28Q9D1C8 Gm23055-201ENSMUST00000082805 94 ntBASIC1.77□□□□□ -2.13
Vps28Q9D1C8 Gm24316-201ENSMUST00000083041 107 ntBASIC1.77□□□□□ -2.13
Vps28Q9D1C8 4921511C20Rik-201ENSMUST00000051530 1606 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
Vps28Q9D1C8 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
Vps28Q9D1C8 Mir669i-201ENSMUST00000117007 127 ntBASIC1.76□□□□□ -2.13
Vps28Q9D1C8 Gm12924-201ENSMUST00000121747 318 ntBASIC1.76□□□□□ -2.13
Vps28Q9D1C8 Gm22479-201ENSMUST00000122566 81 ntBASIC1.76□□□□□ -2.13
Vps28Q9D1C8 n-R5s150-201ENSMUST00000122705 108 ntBASIC1.76□□□□□ -2.13
Vps28Q9D1C8 Gm23230-201ENSMUST00000157298 133 ntBASIC1.76□□□□□ -2.13
Vps28Q9D1C8 Gm27723-201ENSMUST00000157398 63 ntBASIC1.76□□□□□ -2.13
Vps28Q9D1C8 Gm22216-201ENSMUST00000157557 114 ntBASIC1.76□□□□□ -2.13
Vps28Q9D1C8 Mir3569-201ENSMUST00000185080 58 ntBASIC1.76□□□□□ -2.13
Vps28Q9D1C8 Rpl23a-ps7-201ENSMUST00000185437 460 ntBASIC1.76□□□□□ -2.13
Vps28Q9D1C8 AC098718.2-201ENSMUST00000226822 285 ntBASIC1.76□□□□□ -2.13
Vps28Q9D1C8 CT485608.2-201ENSMUST00000227210 291 ntBASIC1.76□□□□□ -2.13
Vps28Q9D1C8 Gm23406-201ENSMUST00000082537 122 ntBASIC1.76□□□□□ -2.13
Vps28Q9D1C8 Gm24165-201ENSMUST00000082718 128 ntBASIC1.76□□□□□ -2.13
Vps28Q9D1C8 AC153964.2-201ENSMUST00000217704 2474 ntBASIC1.76□□□□□ -2.13
Vps28Q9D1C8 Gm23011-201ENSMUST00000104148 132 ntBASIC1.75□□□□□ -2.13
Vps28Q9D1C8 Gm23987-201ENSMUST00000117039 129 ntBASIC1.75□□□□□ -2.13
Vps28Q9D1C8 Fau-ps1-201ENSMUST00000119675 252 ntBASIC1.75□□□□□ -2.13
Vps28Q9D1C8 Gm14709-201ENSMUST00000121225 304 ntBASIC1.75□□□□□ -2.13
Vps28Q9D1C8 1700120G11Rik-201ENSMUST00000150273 491 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
Vps28Q9D1C8 Gm22082-201ENSMUST00000157587 161 ntBASIC1.75□□□□□ -2.13
Vps28Q9D1C8 Gm22386-201ENSMUST00000158192 129 ntBASIC1.75□□□□□ -2.13
Vps28Q9D1C8 Gm23208-201ENSMUST00000158666 127 ntBASIC1.75□□□□□ -2.13
Vps28Q9D1C8 Gm19855-201ENSMUST00000210145 249 ntBASIC1.75□□□□□ -2.13
Vps28Q9D1C8 Olfr1108-ps1-201ENSMUST00000216930 121 ntBASIC1.75□□□□□ -2.13
Vps28Q9D1C8 Mir181a-2-201ENSMUST00000083489 76 ntBASIC1.75□□□□□ -2.13
Vps28Q9D1C8 Gm23941-201ENSMUST00000101953 107 ntBASIC1.74□□□□□ -2.13
Vps28Q9D1C8 Gm23492-201ENSMUST00000116837 115 ntBASIC1.74□□□□□ -2.13
Vps28Q9D1C8 Gm14922-201ENSMUST00000121131 163 ntBASIC1.74□□□□□ -2.13
Vps28Q9D1C8 Gm22665-201ENSMUST00000158720 275 ntBASIC1.74□□□□□ -2.13
Vps28Q9D1C8 Gm43427-201ENSMUST00000198188 331 ntBASIC1.74□□□□□ -2.13
Vps28Q9D1C8 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC1.74□□□□□ -2.13
Vps28Q9D1C8 Mir155-201ENSMUST00000083463 65 ntBASIC1.74□□□□□ -2.13
Vps28Q9D1C8 Gm25513-201ENSMUST00000083861 162 ntBASIC1.74□□□□□ -2.13
Vps28Q9D1C8 Rps24-ps2-201ENSMUST00000091375 395 ntBASIC1.74□□□□□ -2.13
Vps28Q9D1C8 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC1.73□□□□□ -2.13
Vps28Q9D1C8 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
Vps28Q9D1C8 Gm23836-201ENSMUST00000104434 129 ntBASIC1.73□□□□□ -2.13
Vps28Q9D1C8 Ranbp2-ps7-201ENSMUST00000183924 384 ntBASIC1.73□□□□□ -2.13
Vps28Q9D1C8 Mir7225-201ENSMUST00000184178 54 ntBASIC1.73□□□□□ -2.13
Vps28Q9D1C8 AC117232.1-201ENSMUST00000197964 119 ntBASIC1.73□□□□□ -2.13
Vps28Q9D1C8 Gm42774-201ENSMUST00000198854 283 ntBASIC1.73□□□□□ -2.13
Vps28Q9D1C8 AC116460.1-201ENSMUST00000219040 313 ntBASIC1.73□□□□□ -2.13
Vps28Q9D1C8 AC154636.2-201ENSMUST00000222538 161 ntBASIC1.73□□□□□ -2.13
Vps28Q9D1C8 AC173482.5-201ENSMUST00000224181 327 ntBASIC1.73□□□□□ -2.13
Vps28Q9D1C8 AC126939.3-201ENSMUST00000226061 166 ntBASIC1.73□□□□□ -2.13
Vps28Q9D1C8 AC115735.2-201ENSMUST00000227135 351 ntBASIC1.73□□□□□ -2.13
Vps28Q9D1C8 Gm22761-201ENSMUST00000102278 96 ntBASIC1.72□□□□□ -2.13
Vps28Q9D1C8 Gm14491-201ENSMUST00000121919 199 ntBASIC1.72□□□□□ -2.13
Vps28Q9D1C8 Gm15213-201ENSMUST00000122098 216 ntBASIC1.72□□□□□ -2.13
Vps28Q9D1C8 Gm23170-201ENSMUST00000157158 106 ntBASIC1.72□□□□□ -2.13
Vps28Q9D1C8 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
Vps28Q9D1C8 Gm45616-201ENSMUST00000211711 319 ntBASIC1.72□□□□□ -2.13
Vps28Q9D1C8 Gm10092-201ENSMUST00000077110 180 ntBASIC1.72□□□□□ -2.13
Vps28Q9D1C8 Gm26447-201ENSMUST00000082448 129 ntBASIC1.72□□□□□ -2.13
Vps28Q9D1C8 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
Vps28Q9D1C8 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
Vps28Q9D1C8 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
Vps28Q9D1C8 Gm24440-201ENSMUST00000157236 63 ntBASIC1.71□□□□□ -2.14
Vps28Q9D1C8 Gm24262-201ENSMUST00000157431 144 ntBASIC1.71□□□□□ -2.14
Vps28Q9D1C8 Gm24512-201ENSMUST00000174963 65 ntBASIC1.71□□□□□ -2.14
Vps28Q9D1C8 Gm29613-201ENSMUST00000185846 313 ntBASIC1.71□□□□□ -2.14
Vps28Q9D1C8 Gm29544-201ENSMUST00000188860 313 ntBASIC1.71□□□□□ -2.14
Vps28Q9D1C8 Gm28808-201ENSMUST00000190978 313 ntBASIC1.71□□□□□ -2.14
Vps28Q9D1C8 Gm42594-201ENSMUST00000199511 246 ntBASIC1.71□□□□□ -2.14
Vps28Q9D1C8 Gm44408-201ENSMUST00000200205 66 ntBASIC1.71□□□□□ -2.14
Vps28Q9D1C8 AC154552.1-201ENSMUST00000222969 202 ntBASIC1.71□□□□□ -2.14
Vps28Q9D1C8 AC098718.1-201ENSMUST00000226166 175 ntBASIC1.71□□□□□ -2.14
Vps28Q9D1C8 Gm24764-201ENSMUST00000083686 199 ntBASIC1.71□□□□□ -2.14
Vps28Q9D1C8 Olfr67-201ENSMUST00000183254 3851 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
Vps28Q9D1C8 Mir7241-201ENSMUST00000184532 64 ntBASIC1.7□□□□□ -2.14
Vps28Q9D1C8 Mir8090-201ENSMUST00000185078 136 ntBASIC1.7□□□□□ -2.14
Vps28Q9D1C8 AL772271.1-201ENSMUST00000196848 65 ntBASIC1.7□□□□□ -2.14
Vps28Q9D1C8 Olfr183-201ENSMUST00000073320 2040 ntAPPRIS P1 TSL 2 BASIC1.7□□□□□ -2.14
Retrieved 100 of 76,532 protein–RNA pairs in 89.3 ms