Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Gm11204-201ENSMUST00000122438 147 ntBASIC2.37□□□□□ -2.03
Ddx56Q9D0R4 Gm24668-201ENSMUST00000158935 104 ntBASIC2.37□□□□□ -2.03
Ddx56Q9D0R4 Gm27369-201ENSMUST00000185182 71 ntBASIC2.37□□□□□ -2.03
Ddx56Q9D0R4 Mir7232-201ENSMUST00000197929 74 ntBASIC2.37□□□□□ -2.03
Ddx56Q9D0R4 Mir466e-201ENSMUST00000198862 84 ntBASIC2.37□□□□□ -2.03
Ddx56Q9D0R4 Gm23370-201ENSMUST00000199545 130 ntBASIC2.37□□□□□ -2.03
Ddx56Q9D0R4 Mir466c-1-201ENSMUST00000200654 84 ntBASIC2.37□□□□□ -2.03
Ddx56Q9D0R4 Gm6796-201ENSMUST00000211919 243 ntBASIC2.37□□□□□ -2.03
Ddx56Q9D0R4 AC115291.1-201ENSMUST00000226803 258 ntBASIC2.37□□□□□ -2.03
Ddx56Q9D0R4 Gm25130-201ENSMUST00000082650 156 ntBASIC2.37□□□□□ -2.03
Ddx56Q9D0R4 Gm42862-201ENSMUST00000197494 2621 ntBASIC2.36□□□□□ -2.03
Ddx56Q9D0R4 AC125374.3-201ENSMUST00000214983 2810 ntBASIC2.36□□□□□ -2.03
Ddx56Q9D0R4 Gm23472-201ENSMUST00000101806 191 ntBASIC2.36□□□□□ -2.03
Ddx56Q9D0R4 n-R5s200-201ENSMUST00000104194 113 ntBASIC2.36□□□□□ -2.03
Ddx56Q9D0R4 Mir881-201ENSMUST00000104844 78 ntBASIC2.36□□□□□ -2.03
Ddx56Q9D0R4 Gm23101-201ENSMUST00000157550 137 ntBASIC2.36□□□□□ -2.03
Ddx56Q9D0R4 Gm23391-201ENSMUST00000157579 104 ntBASIC2.36□□□□□ -2.03
Ddx56Q9D0R4 Gm22500-201ENSMUST00000158982 99 ntBASIC2.36□□□□□ -2.03
Ddx56Q9D0R4 Gm16326-201ENSMUST00000162843 414 ntBASIC2.36□□□□□ -2.03
Ddx56Q9D0R4 Gm24497-201ENSMUST00000177868 191 ntBASIC2.36□□□□□ -2.03
Ddx56Q9D0R4 Gm25939-201ENSMUST00000179876 191 ntBASIC2.36□□□□□ -2.03
Ddx56Q9D0R4 AC155839.1-201ENSMUST00000200105 147 ntBASIC2.36□□□□□ -2.03
Ddx56Q9D0R4 Eif4e-206ENSMUST00000200239 526 ntTSL 5 BASIC2.36□□□□□ -2.03
Ddx56Q9D0R4 Gm6105-201ENSMUST00000200580 624 ntBASIC2.36□□□□□ -2.03
Ddx56Q9D0R4 Gm20083-201ENSMUST00000205849 751 ntTSL 3 BASIC2.36□□□□□ -2.03
Ddx56Q9D0R4 AC160863.1-201ENSMUST00000218412 317 ntBASIC2.36□□□□□ -2.03
Ddx56Q9D0R4 Gm23444-201ENSMUST00000082922 191 ntBASIC2.36□□□□□ -2.03
Ddx56Q9D0R4 Mir155-201ENSMUST00000083463 65 ntBASIC2.36□□□□□ -2.03
Ddx56Q9D0R4 Mir127-201ENSMUST00000093568 70 ntBASIC2.36□□□□□ -2.03
Ddx56Q9D0R4 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
Ddx56Q9D0R4 Gm23656-201ENSMUST00000122626 112 ntBASIC2.35□□□□□ -2.03
Ddx56Q9D0R4 Gm24900-201ENSMUST00000158128 134 ntBASIC2.35□□□□□ -2.03
Ddx56Q9D0R4 Mir1927-201ENSMUST00000158579 109 ntBASIC2.35□□□□□ -2.03
Ddx56Q9D0R4 Gm23182-201ENSMUST00000158688 135 ntBASIC2.35□□□□□ -2.03
Ddx56Q9D0R4 Gm34139-201ENSMUST00000196166 294 ntBASIC2.35□□□□□ -2.03
Ddx56Q9D0R4 Gm18617-201ENSMUST00000222311 259 ntBASIC2.35□□□□□ -2.03
Ddx56Q9D0R4 AC129202.1-201ENSMUST00000224895 526 ntBASIC2.35□□□□□ -2.03
Ddx56Q9D0R4 Olfr1442-203ENSMUST00000208494 3593 ntAPPRIS P1 TSL 3 BASIC2.34□□□□□ -2.03
Ddx56Q9D0R4 Trav6-3-202ENSMUST00000183604 305 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
Ddx56Q9D0R4 Ranbp2-ps5-201ENSMUST00000185141 379 ntBASIC2.34□□□□□ -2.03
Ddx56Q9D0R4 Gm29022-201ENSMUST00000190702 225 ntBASIC2.34□□□□□ -2.03
Ddx56Q9D0R4 AC158598.1-201ENSMUST00000214349 3847 ntBASIC2.34□□□□□ -2.03
Ddx56Q9D0R4 AC125488.1-201ENSMUST00000219586 212 ntBASIC2.34□□□□□ -2.03
Ddx56Q9D0R4 AC098718.1-201ENSMUST00000226166 175 ntBASIC2.34□□□□□ -2.03
Ddx56Q9D0R4 Gm24038-201ENSMUST00000082872 159 ntBASIC2.34□□□□□ -2.03
Ddx56Q9D0R4 Snora19-201ENSMUST00000082962 132 ntBASIC2.34□□□□□ -2.03
Ddx56Q9D0R4 Gm23658-201ENSMUST00000083233 132 ntBASIC2.34□□□□□ -2.03
Ddx56Q9D0R4 Agmo-201ENSMUST00000049874 2423 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
Ddx56Q9D0R4 Olfr67-201ENSMUST00000183254 3851 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Ddx56Q9D0R4 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC2.33□□□□□ -2.04
Ddx56Q9D0R4 Gm23836-201ENSMUST00000104434 129 ntBASIC2.33□□□□□ -2.04
Ddx56Q9D0R4 Gm16510-201ENSMUST00000153501 249 ntBASIC2.33□□□□□ -2.04
Ddx56Q9D0R4 Gm22083-201ENSMUST00000157586 102 ntBASIC2.33□□□□□ -2.04
Ddx56Q9D0R4 Gm25914-201ENSMUST00000157618 153 ntBASIC2.33□□□□□ -2.04
Ddx56Q9D0R4 Gm26864-201ENSMUST00000181346 156 ntBASIC2.33□□□□□ -2.04
Ddx56Q9D0R4 Ranbp2-ps7-201ENSMUST00000183924 384 ntBASIC2.33□□□□□ -2.04
Ddx56Q9D0R4 Gm44563-201ENSMUST00000207958 178 ntBASIC2.33□□□□□ -2.04
Ddx56Q9D0R4 Snora3-201ENSMUST00000083082 132 ntBASIC2.33□□□□□ -2.04
Ddx56Q9D0R4 Gm10360-201ENSMUST00000097219 272 ntBASIC2.33□□□□□ -2.04
Ddx56Q9D0R4 Zfp119a-201ENSMUST00000079642 2018 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
Ddx56Q9D0R4 Gm12686-201ENSMUST00000120546 397 ntBASIC2.32□□□□□ -2.04
Ddx56Q9D0R4 n-R5s164-201ENSMUST00000122664 112 ntBASIC2.32□□□□□ -2.04
Ddx56Q9D0R4 Gm23172-201ENSMUST00000157160 124 ntBASIC2.32□□□□□ -2.04
Ddx56Q9D0R4 Gm27579-201ENSMUST00000158113 63 ntBASIC2.32□□□□□ -2.04
Ddx56Q9D0R4 4930598A11Rik-201ENSMUST00000180742 628 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
Ddx56Q9D0R4 Gm19855-201ENSMUST00000210145 249 ntBASIC2.32□□□□□ -2.04
Ddx56Q9D0R4 Gm15314-201ENSMUST00000120740 1887 ntBASIC2.31□□□□□ -2.04
Ddx56Q9D0R4 Gm25376-201ENSMUST00000104340 133 ntBASIC2.31□□□□□ -2.04
Ddx56Q9D0R4 Gm22217-201ENSMUST00000157556 313 ntBASIC2.31□□□□□ -2.04
Ddx56Q9D0R4 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC2.31□□□□□ -2.04
Ddx56Q9D0R4 Gm25730-201ENSMUST00000178753 165 ntBASIC2.31□□□□□ -2.04
Ddx56Q9D0R4 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC2.31□□□□□ -2.04
Ddx56Q9D0R4 AC122367.2-201ENSMUST00000220987 534 ntTSL 2 BASIC2.31□□□□□ -2.04
Ddx56Q9D0R4 AC126691.1-201ENSMUST00000226534 202 ntBASIC2.31□□□□□ -2.04
Ddx56Q9D0R4 Gm21876-201ENSMUST00000096511 282 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Ddx56Q9D0R4 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Ddx56Q9D0R4 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC2.31□□□□□ -2.04
Ddx56Q9D0R4 Gm23705-201ENSMUST00000104370 130 ntBASIC2.3□□□□□ -2.04
Ddx56Q9D0R4 Gm13801-201ENSMUST00000120750 160 ntBASIC2.3□□□□□ -2.04
Ddx56Q9D0R4 Gm13200-201ENSMUST00000138802 258 ntTSL 3 BASIC2.3□□□□□ -2.04
Ddx56Q9D0R4 Gm15692-201ENSMUST00000152173 352 ntBASIC2.3□□□□□ -2.04
Ddx56Q9D0R4 Gm25184-201ENSMUST00000157753 163 ntBASIC2.3□□□□□ -2.04
Ddx56Q9D0R4 Gm22093-201ENSMUST00000158980 111 ntBASIC2.3□□□□□ -2.04
Ddx56Q9D0R4 Gm17036-201ENSMUST00000168187 254 ntTSL 3 BASIC2.3□□□□□ -2.04
Ddx56Q9D0R4 Gm28537-201ENSMUST00000189026 315 ntBASIC2.3□□□□□ -2.04
Ddx56Q9D0R4 Gm29631-201ENSMUST00000191065 315 ntBASIC2.3□□□□□ -2.04
Ddx56Q9D0R4 Gm43563-201ENSMUST00000196761 198 ntBASIC2.3□□□□□ -2.04
Ddx56Q9D0R4 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC2.3□□□□□ -2.04
Ddx56Q9D0R4 CU062626.2-201ENSMUST00000223953 274 ntBASIC2.3□□□□□ -2.04
Ddx56Q9D0R4 Gm10203-201ENSMUST00000087348 198 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
Ddx56Q9D0R4 Gm10217-201ENSMUST00000088080 135 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
Ddx56Q9D0R4 Olfr1448-203ENSMUST00000213713 4336 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
Ddx56Q9D0R4 Olfr561-202ENSMUST00000213432 2498 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
Ddx56Q9D0R4 Mir1195-201ENSMUST00000116818 98 ntBASIC2.29□□□□□ -2.04
Ddx56Q9D0R4 Gm23841-201ENSMUST00000116951 114 ntBASIC2.29□□□□□ -2.04
Ddx56Q9D0R4 Mir497-201ENSMUST00000200557 84 ntBASIC2.29□□□□□ -2.04
Ddx56Q9D0R4 Gm44808-201ENSMUST00000208887 264 ntTSL 5 BASIC2.29□□□□□ -2.04
Ddx56Q9D0R4 Gm25357-201ENSMUST00000082745 72 ntBASIC2.29□□□□□ -2.04
Ddx56Q9D0R4 Ppp1r3a-201ENSMUST00000045096 6965 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
Ddx56Q9D0R4 Gm43484-201ENSMUST00000198333 5966 ntBASIC2.28□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 135.2 ms