Protein–RNA interactions for Protein: Q9CWT6

Ddx28, Probable ATP-dependent RNA helicase DDX28, mousemouse

Known RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx28Q9CWT6 Defb44-ps-201ENSMUST00000126871 219 ntBASIC1.74□□□□□ -2.13
Ddx28Q9CWT6 Gm17036-201ENSMUST00000168187 254 ntTSL 3 BASIC1.74□□□□□ -2.13
Ddx28Q9CWT6 Gm25615-201ENSMUST00000177836 94 ntBASIC1.74□□□□□ -2.13
Ddx28Q9CWT6 Gm27544-201ENSMUST00000185069 155 ntBASIC1.74□□□□□ -2.13
Ddx28Q9CWT6 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC1.74□□□□□ -2.13
Ddx28Q9CWT6 Sprr2h-202ENSMUST00000191886 297 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
Ddx28Q9CWT6 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
Ddx28Q9CWT6 Gm37089-201ENSMUST00000195616 129 ntBASIC1.74□□□□□ -2.13
Ddx28Q9CWT6 Gm45907-201ENSMUST00000213023 193 ntBASIC1.74□□□□□ -2.13
Ddx28Q9CWT6 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
Ddx28Q9CWT6 Mir301-201ENSMUST00000083655 86 ntBASIC1.74□□□□□ -2.13
Ddx28Q9CWT6 Gm21833-201ENSMUST00000177665 1500 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
Ddx28Q9CWT6 Gm36669-201ENSMUST00000201757 3650 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
Ddx28Q9CWT6 Gm43484-201ENSMUST00000198333 5966 ntBASIC1.73□□□□□ -2.13
Ddx28Q9CWT6 Gm24590-201ENSMUST00000116699 119 ntBASIC1.73□□□□□ -2.13
Ddx28Q9CWT6 Gm24277-201ENSMUST00000158661 104 ntBASIC1.73□□□□□ -2.13
Ddx28Q9CWT6 Gm26287-201ENSMUST00000158887 81 ntBASIC1.73□□□□□ -2.13
Ddx28Q9CWT6 Gm20477-201ENSMUST00000174028 280 ntBASIC1.73□□□□□ -2.13
Ddx28Q9CWT6 Gm27511-201ENSMUST00000183502 127 ntBASIC1.73□□□□□ -2.13
Ddx28Q9CWT6 Mir7226-201ENSMUST00000184953 60 ntBASIC1.73□□□□□ -2.13
Ddx28Q9CWT6 Tmem167-ps2-201ENSMUST00000190251 214 ntBASIC1.73□□□□□ -2.13
Ddx28Q9CWT6 Mir7118-201ENSMUST00000197760 61 ntBASIC1.73□□□□□ -2.13
Ddx28Q9CWT6 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC1.73□□□□□ -2.13
Ddx28Q9CWT6 AC153964.2-201ENSMUST00000217704 2474 ntBASIC1.73□□□□□ -2.13
Ddx28Q9CWT6 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
Ddx28Q9CWT6 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
Ddx28Q9CWT6 Gm15861-201ENSMUST00000120979 339 ntBASIC1.72□□□□□ -2.13
Ddx28Q9CWT6 Gm24440-201ENSMUST00000157236 63 ntBASIC1.72□□□□□ -2.13
Ddx28Q9CWT6 Gm24851-201ENSMUST00000158028 103 ntBASIC1.72□□□□□ -2.13
Ddx28Q9CWT6 Gm25371-201ENSMUST00000158162 101 ntBASIC1.72□□□□□ -2.13
Ddx28Q9CWT6 Gm25051-201ENSMUST00000158602 249 ntBASIC1.72□□□□□ -2.13
Ddx28Q9CWT6 Gm24512-201ENSMUST00000174963 65 ntBASIC1.72□□□□□ -2.13
Ddx28Q9CWT6 Mir7014-201ENSMUST00000183853 63 ntBASIC1.72□□□□□ -2.13
Ddx28Q9CWT6 Gm27722-201ENSMUST00000183908 76 ntBASIC1.72□□□□□ -2.13
Ddx28Q9CWT6 Mir6540-201ENSMUST00000184886 108 ntBASIC1.72□□□□□ -2.13
Ddx28Q9CWT6 AC132615.1-201ENSMUST00000213873 255 ntBASIC1.72□□□□□ -2.13
Ddx28Q9CWT6 AC125374.2-201ENSMUST00000214278 162 ntBASIC1.72□□□□□ -2.13
Ddx28Q9CWT6 AC069074.1-201ENSMUST00000220048 381 ntBASIC1.72□□□□□ -2.13
Ddx28Q9CWT6 Vmn2r-ps102-203ENSMUST00000222739 604 ntTSL 5 BASIC1.72□□□□□ -2.13
Ddx28Q9CWT6 AC239878.2-201ENSMUST00000224048 464 ntBASIC1.72□□□□□ -2.13
Ddx28Q9CWT6 AC173482.5-201ENSMUST00000224181 327 ntBASIC1.72□□□□□ -2.13
Ddx28Q9CWT6 Olfr948-202ENSMUST00000216132 4164 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
Ddx28Q9CWT6 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC1.72□□□□□ -2.13
Ddx28Q9CWT6 Gm24423-201ENSMUST00000101982 106 ntBASIC1.71□□□□□ -2.14
Ddx28Q9CWT6 Gm22750-201ENSMUST00000102076 103 ntBASIC1.71□□□□□ -2.14
Ddx28Q9CWT6 Gm13588-201ENSMUST00000120026 135 ntBASIC1.71□□□□□ -2.14
Ddx28Q9CWT6 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC1.71□□□□□ -2.14
Ddx28Q9CWT6 Gm22075-201ENSMUST00000158599 192 ntBASIC1.71□□□□□ -2.14
Ddx28Q9CWT6 Gm22450-201ENSMUST00000179641 107 ntBASIC1.71□□□□□ -2.14
Ddx28Q9CWT6 Gm25473-201ENSMUST00000180191 107 ntBASIC1.71□□□□□ -2.14
Ddx28Q9CWT6 Mir7683-201ENSMUST00000183842 61 ntBASIC1.71□□□□□ -2.14
Ddx28Q9CWT6 Gm27421-201ENSMUST00000184729 167 ntBASIC1.71□□□□□ -2.14
Ddx28Q9CWT6 Olfr277-ps1-201ENSMUST00000205749 285 ntBASIC1.71□□□□□ -2.14
Ddx28Q9CWT6 AC165293.1-201ENSMUST00000219669 329 ntBASIC1.71□□□□□ -2.14
Ddx28Q9CWT6 AC129202.1-201ENSMUST00000224895 526 ntBASIC1.71□□□□□ -2.14
Ddx28Q9CWT6 CT010454.1-201ENSMUST00000225975 265 ntBASIC1.71□□□□□ -2.14
Ddx28Q9CWT6 Gm24856-201ENSMUST00000082809 107 ntBASIC1.71□□□□□ -2.14
Ddx28Q9CWT6 Gm26071-201ENSMUST00000083261 107 ntBASIC1.71□□□□□ -2.14
Ddx28Q9CWT6 Gm24521-201ENSMUST00000083958 107 ntBASIC1.71□□□□□ -2.14
Ddx28Q9CWT6 Gm15281-201ENSMUST00000125181 351 ntBASIC1.7□□□□□ -2.14
Ddx28Q9CWT6 Gm22803-201ENSMUST00000158049 283 ntBASIC1.7□□□□□ -2.14
Ddx28Q9CWT6 Gm28921-201ENSMUST00000190219 378 ntBASIC1.7□□□□□ -2.14
Ddx28Q9CWT6 Gm44352-201ENSMUST00000196358 110 ntBASIC1.7□□□□□ -2.14
Ddx28Q9CWT6 AC125167.1-201ENSMUST00000198698 141 ntBASIC1.7□□□□□ -2.14
Ddx28Q9CWT6 Gm45365-201ENSMUST00000209489 256 ntBASIC1.7□□□□□ -2.14
Ddx28Q9CWT6 Gm10226-201ENSMUST00000072133 255 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
Ddx28Q9CWT6 mt-Td-201ENSMUST00000082404 70 ntBASIC1.7□□□□□ -2.14
Ddx28Q9CWT6 Gm22248-201ENSMUST00000082482 150 ntBASIC1.7□□□□□ -2.14
Ddx28Q9CWT6 Gm24204-201ENSMUST00000082950 107 ntBASIC1.7□□□□□ -2.14
Ddx28Q9CWT6 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
Ddx28Q9CWT6 Mir873a-201ENSMUST00000104863 77 ntBASIC1.69□□□□□ -2.14
Ddx28Q9CWT6 Gm6444-201ENSMUST00000119611 458 ntBASIC1.69□□□□□ -2.14
Ddx28Q9CWT6 Gm13569-201ENSMUST00000137221 574 ntTSL 3 BASIC1.69□□□□□ -2.14
Ddx28Q9CWT6 Gm23536-201ENSMUST00000157541 134 ntBASIC1.69□□□□□ -2.14
Ddx28Q9CWT6 Gm25643-201ENSMUST00000158874 103 ntBASIC1.69□□□□□ -2.14
Ddx28Q9CWT6 Ear-ps4-201ENSMUST00000166834 450 ntBASIC1.69□□□□□ -2.14
Ddx28Q9CWT6 Snord87-201ENSMUST00000175437 87 ntBASIC1.69□□□□□ -2.14
Ddx28Q9CWT6 Mir6406-201ENSMUST00000183592 120 ntBASIC1.69□□□□□ -2.14
Ddx28Q9CWT6 Gm37778-201ENSMUST00000191732 190 ntBASIC1.69□□□□□ -2.14
Ddx28Q9CWT6 AC168056.1-201ENSMUST00000225270 180 ntBASIC1.69□□□□□ -2.14
Ddx28Q9CWT6 AC127371.3-201ENSMUST00000228129 415 ntBASIC1.69□□□□□ -2.14
Ddx28Q9CWT6 n-R5s159-201ENSMUST00000122681 120 ntBASIC1.68□□□□□ -2.14
Ddx28Q9CWT6 Gm23390-201ENSMUST00000157393 106 ntBASIC1.68□□□□□ -2.14
Ddx28Q9CWT6 Gm25664-201ENSMUST00000157697 107 ntBASIC1.68□□□□□ -2.14
Ddx28Q9CWT6 Gm24392-201ENSMUST00000158136 103 ntBASIC1.68□□□□□ -2.14
Ddx28Q9CWT6 Gm24222-201ENSMUST00000158834 93 ntBASIC1.68□□□□□ -2.14
Ddx28Q9CWT6 Gm24668-201ENSMUST00000158935 104 ntBASIC1.68□□□□□ -2.14
Ddx28Q9CWT6 Gm24667-201ENSMUST00000158938 103 ntBASIC1.68□□□□□ -2.14
Ddx28Q9CWT6 Gm24656-201ENSMUST00000177548 132 ntBASIC1.68□□□□□ -2.14
Ddx28Q9CWT6 Gm21885-201ENSMUST00000178891 327 ntBASIC1.68□□□□□ -2.14
Ddx28Q9CWT6 Gm28724-201ENSMUST00000186149 625 ntBASIC1.68□□□□□ -2.14
Ddx28Q9CWT6 Gm37693-201ENSMUST00000194562 234 ntBASIC1.68□□□□□ -2.14
Ddx28Q9CWT6 Gm5010-201ENSMUST00000213131 260 ntBASIC1.68□□□□□ -2.14
Ddx28Q9CWT6 Gm22358-201ENSMUST00000082877 122 ntBASIC1.68□□□□□ -2.14
Ddx28Q9CWT6 Gm25188-201ENSMUST00000083913 122 ntBASIC1.68□□□□□ -2.14
Ddx28Q9CWT6 Gm10360-201ENSMUST00000097219 272 ntBASIC1.68□□□□□ -2.14
Ddx28Q9CWT6 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC1.68□□□□□ -2.14
Ddx28Q9CWT6 AC133934.2-201ENSMUST00000221729 4129 ntBASIC1.68□□□□□ -2.14
Ddx28Q9CWT6 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
Ddx28Q9CWT6 Defb43-201ENSMUST00000100491 408 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
Retrieved 100 of 76,532 protein–RNA pairs in 113.9 ms