Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm23851-201ENSMUST00000083831 103 ntBASIC1.55□□□□□ -2.16
Smc1aQ9CU62 Gm15102-201ENSMUST00000118740 1502 ntBASIC1.55□□□□□ -2.16
Smc1aQ9CU62 Gm15101-201ENSMUST00000178818 1502 ntBASIC1.55□□□□□ -2.16
Smc1aQ9CU62 Mir343-201ENSMUST00000102360 75 ntBASIC1.54□□□□□ -2.16
Smc1aQ9CU62 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
Smc1aQ9CU62 Gm9059-201ENSMUST00000118319 183 ntBASIC1.54□□□□□ -2.16
Smc1aQ9CU62 Gm14298-201ENSMUST00000139032 237 ntBASIC1.54□□□□□ -2.16
Smc1aQ9CU62 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
Smc1aQ9CU62 Gm16356-201ENSMUST00000143300 169 ntBASIC1.54□□□□□ -2.16
Smc1aQ9CU62 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC1.54□□□□□ -2.16
Smc1aQ9CU62 Gm22559-201ENSMUST00000157329 134 ntBASIC1.54□□□□□ -2.16
Smc1aQ9CU62 Gm25491-201ENSMUST00000158733 308 ntBASIC1.54□□□□□ -2.16
Smc1aQ9CU62 Gm25284-201ENSMUST00000180345 141 ntBASIC1.54□□□□□ -2.16
Smc1aQ9CU62 Gm21064-202ENSMUST00000190583 278 ntBASIC1.54□□□□□ -2.16
Smc1aQ9CU62 Gm45738-201ENSMUST00000203645 233 ntTSL 5 BASIC1.54□□□□□ -2.16
Smc1aQ9CU62 AC152414.2-201ENSMUST00000219620 537 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
Smc1aQ9CU62 Gm8935-202ENSMUST00000105727 1959 ntBASIC1.54□□□□□ -2.16
Smc1aQ9CU62 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC1.53□□□□□ -2.16
Smc1aQ9CU62 Gm23060-201ENSMUST00000102345 109 ntBASIC1.53□□□□□ -2.16
Smc1aQ9CU62 Gm11857-201ENSMUST00000119817 324 ntBASIC1.53□□□□□ -2.16
Smc1aQ9CU62 Gm25781-201ENSMUST00000122527 84 ntBASIC1.53□□□□□ -2.16
Smc1aQ9CU62 Gm22281-201ENSMUST00000157198 103 ntBASIC1.53□□□□□ -2.16
Smc1aQ9CU62 Gm24668-201ENSMUST00000158935 104 ntBASIC1.53□□□□□ -2.16
Smc1aQ9CU62 Gm23355-201ENSMUST00000177614 107 ntBASIC1.53□□□□□ -2.16
Smc1aQ9CU62 Gm23148-201ENSMUST00000180367 107 ntBASIC1.53□□□□□ -2.16
Smc1aQ9CU62 Gm27793-201ENSMUST00000183405 76 ntBASIC1.53□□□□□ -2.16
Smc1aQ9CU62 Gm27493-201ENSMUST00000184128 78 ntBASIC1.53□□□□□ -2.16
Smc1aQ9CU62 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC1.53□□□□□ -2.16
Smc1aQ9CU62 Gm37404-201ENSMUST00000195726 359 ntBASIC1.53□□□□□ -2.16
Smc1aQ9CU62 Olfr1109-202ENSMUST00000214636 2483 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
Smc1aQ9CU62 AC154515.1-201ENSMUST00000226085 2841 ntBASIC1.53□□□□□ -2.16
Smc1aQ9CU62 Gm24355-201ENSMUST00000082858 122 ntBASIC1.53□□□□□ -2.16
Smc1aQ9CU62 Gm25258-201ENSMUST00000083049 107 ntBASIC1.53□□□□□ -2.16
Smc1aQ9CU62 Rgs13-201ENSMUST00000052375 1510 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
Smc1aQ9CU62 Gm22673-201ENSMUST00000104415 131 ntBASIC1.52□□□□□ -2.17
Smc1aQ9CU62 Olfr1169-ps1-201ENSMUST00000121437 233 ntBASIC1.52□□□□□ -2.17
Smc1aQ9CU62 Gm17052-201ENSMUST00000165496 289 ntBASIC1.52□□□□□ -2.17
Smc1aQ9CU62 Traj60-201ENSMUST00000167781 54 ntBASIC1.52□□□□□ -2.17
Smc1aQ9CU62 Gm10772-201ENSMUST00000167981 255 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
Smc1aQ9CU62 Gm24154-201ENSMUST00000175261 130 ntBASIC1.52□□□□□ -2.17
Smc1aQ9CU62 Gm24366-201ENSMUST00000175383 86 ntBASIC1.52□□□□□ -2.17
Smc1aQ9CU62 Gm22114-201ENSMUST00000177756 107 ntBASIC1.52□□□□□ -2.17
Smc1aQ9CU62 Gm29613-201ENSMUST00000185846 313 ntBASIC1.52□□□□□ -2.17
Smc1aQ9CU62 Gm29544-201ENSMUST00000188860 313 ntBASIC1.52□□□□□ -2.17
Smc1aQ9CU62 Gm28808-201ENSMUST00000190978 313 ntBASIC1.52□□□□□ -2.17
Smc1aQ9CU62 Gm37918-201ENSMUST00000192071 120 ntBASIC1.52□□□□□ -2.17
Smc1aQ9CU62 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
Smc1aQ9CU62 Gm46997-201ENSMUST00000222108 217 ntBASIC1.52□□□□□ -2.17
Smc1aQ9CU62 AC116589.4-201ENSMUST00000222390 216 ntBASIC1.52□□□□□ -2.17
Smc1aQ9CU62 Gm25078-201ENSMUST00000082530 107 ntBASIC1.52□□□□□ -2.17
Smc1aQ9CU62 Gm24625-201ENSMUST00000082622 130 ntBASIC1.52□□□□□ -2.17
Smc1aQ9CU62 Gm25930-201ENSMUST00000082785 107 ntBASIC1.52□□□□□ -2.17
Smc1aQ9CU62 Gm25789-201ENSMUST00000083294 76 ntBASIC1.52□□□□□ -2.17
Smc1aQ9CU62 Gm25509-201ENSMUST00000116985 106 ntBASIC1.51□□□□□ -2.17
Smc1aQ9CU62 Fau-ps1-201ENSMUST00000119675 252 ntBASIC1.51□□□□□ -2.17
Smc1aQ9CU62 Gm24630-201ENSMUST00000122768 106 ntBASIC1.51□□□□□ -2.17
Smc1aQ9CU62 Gm14773-201ENSMUST00000125932 451 ntTSL 2 BASIC1.51□□□□□ -2.17
Smc1aQ9CU62 Gm23232-201ENSMUST00000157300 105 ntBASIC1.51□□□□□ -2.17
Smc1aQ9CU62 Gm25450-201ENSMUST00000179144 107 ntBASIC1.51□□□□□ -2.17
Smc1aQ9CU62 Mir8119-201ENSMUST00000183371 129 ntBASIC1.51□□□□□ -2.17
Smc1aQ9CU62 Mir7059-201ENSMUST00000184825 59 ntBASIC1.51□□□□□ -2.17
Smc1aQ9CU62 Gm28418-201ENSMUST00000186179 423 ntBASIC1.51□□□□□ -2.17
Smc1aQ9CU62 Gm44473-201ENSMUST00000204039 152 ntBASIC1.51□□□□□ -2.17
Smc1aQ9CU62 AL603630.1-201ENSMUST00000214781 147 ntBASIC1.51□□□□□ -2.17
Smc1aQ9CU62 mt-Tr-201ENSMUST00000082412 68 ntBASIC1.51□□□□□ -2.17
Smc1aQ9CU62 Gm24163-201ENSMUST00000093660 132 ntBASIC1.51□□□□□ -2.17
Smc1aQ9CU62 Gm43960-201ENSMUST00000204249 5020 ntBASIC1.51□□□□□ -2.17
Smc1aQ9CU62 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
Smc1aQ9CU62 Ighv1-47-201ENSMUST00000103518 294 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
Smc1aQ9CU62 Gm12647-201ENSMUST00000118977 265 ntBASIC1.5□□□□□ -2.17
Smc1aQ9CU62 Gm11572-201ENSMUST00000119164 120 ntBASIC1.5□□□□□ -2.17
Smc1aQ9CU62 Gm23329-201ENSMUST00000157415 108 ntBASIC1.5□□□□□ -2.17
Smc1aQ9CU62 Gm23474-201ENSMUST00000158884 75 ntBASIC1.5□□□□□ -2.17
Smc1aQ9CU62 Gm27421-201ENSMUST00000184729 167 ntBASIC1.5□□□□□ -2.17
Smc1aQ9CU62 Gm36946-201ENSMUST00000192706 435 ntBASIC1.5□□□□□ -2.17
Smc1aQ9CU62 Gm45116-201ENSMUST00000207392 275 ntBASIC1.5□□□□□ -2.17
Smc1aQ9CU62 AC132437.1-201ENSMUST00000218308 320 ntBASIC1.5□□□□□ -2.17
Smc1aQ9CU62 AC164086.1-201ENSMUST00000221038 289 ntBASIC1.5□□□□□ -2.17
Smc1aQ9CU62 Gm11351-202ENSMUST00000225724 478 ntBASIC1.5□□□□□ -2.17
Smc1aQ9CU62 Gm25357-201ENSMUST00000082745 72 ntBASIC1.5□□□□□ -2.17
Smc1aQ9CU62 Gm26107-201ENSMUST00000083972 107 ntBASIC1.5□□□□□ -2.17
Smc1aQ9CU62 AC102369.2-201ENSMUST00000219725 1679 ntBASIC1.5□□□□□ -2.17
Smc1aQ9CU62 AC160115.1-201ENSMUST00000224678 1574 ntBASIC1.5□□□□□ -2.17
Smc1aQ9CU62 Gm23013-201ENSMUST00000104146 106 ntBASIC1.49□□□□□ -2.17
Smc1aQ9CU62 Gm25848-201ENSMUST00000116790 144 ntBASIC1.49□□□□□ -2.17
Smc1aQ9CU62 Gm12432-201ENSMUST00000119540 186 ntBASIC1.49□□□□□ -2.17
Smc1aQ9CU62 Gm27711-201ENSMUST00000183802 118 ntBASIC1.49□□□□□ -2.17
Smc1aQ9CU62 Mir7675-201ENSMUST00000184262 58 ntBASIC1.49□□□□□ -2.17
Smc1aQ9CU62 Gm28110-201ENSMUST00000185782 315 ntBASIC1.49□□□□□ -2.17
Smc1aQ9CU62 Gm29057-201ENSMUST00000186468 315 ntBASIC1.49□□□□□ -2.17
Smc1aQ9CU62 Gm28737-201ENSMUST00000186808 315 ntBASIC1.49□□□□□ -2.17
Smc1aQ9CU62 Gm29147-201ENSMUST00000186846 315 ntBASIC1.49□□□□□ -2.17
Smc1aQ9CU62 Gm29118-201ENSMUST00000186908 315 ntBASIC1.49□□□□□ -2.17
Smc1aQ9CU62 Gm28433-201ENSMUST00000187085 315 ntBASIC1.49□□□□□ -2.17
Smc1aQ9CU62 Gm29227-201ENSMUST00000187139 315 ntBASIC1.49□□□□□ -2.17
Smc1aQ9CU62 Gm28759-201ENSMUST00000187621 315 ntBASIC1.49□□□□□ -2.17
Smc1aQ9CU62 Gm28831-201ENSMUST00000187739 315 ntBASIC1.49□□□□□ -2.17
Smc1aQ9CU62 Gm29034-201ENSMUST00000188099 315 ntBASIC1.49□□□□□ -2.17
Smc1aQ9CU62 Gm28752-201ENSMUST00000188340 315 ntBASIC1.49□□□□□ -2.17
Smc1aQ9CU62 Gm28569-201ENSMUST00000188748 315 ntBASIC1.49□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 139.7 ms