Protein–RNA interactions for Protein: Q9CR29

Ccdc43, Coiled-coil domain-containing protein 43, mousemouse

Known RBP Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc43Q9CR29 Gm37146-201ENSMUST00000192572 463 ntTSL 3 BASIC1.34□□□□□ -2.19
Ccdc43Q9CR29 Mir7661-201ENSMUST00000197023 61 ntBASIC1.34□□□□□ -2.19
Ccdc43Q9CR29 Gm45543-201ENSMUST00000209327 88 ntBASIC1.34□□□□□ -2.19
Ccdc43Q9CR29 CU062626.2-201ENSMUST00000223953 274 ntBASIC1.34□□□□□ -2.19
Ccdc43Q9CR29 Gm22306-201ENSMUST00000082692 107 ntBASIC1.34□□□□□ -2.19
Ccdc43Q9CR29 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
Ccdc43Q9CR29 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
Ccdc43Q9CR29 Gm24588-201ENSMUST00000116696 83 ntBASIC1.33□□□□□ -2.2
Ccdc43Q9CR29 Gm22477-201ENSMUST00000122569 316 ntBASIC1.33□□□□□ -2.2
Ccdc43Q9CR29 Gm23232-201ENSMUST00000157300 105 ntBASIC1.33□□□□□ -2.2
Ccdc43Q9CR29 Gm17196-201ENSMUST00000164074 345 ntTSL 5 BASIC1.33□□□□□ -2.2
Ccdc43Q9CR29 Tmem167-ps2-201ENSMUST00000190251 214 ntBASIC1.33□□□□□ -2.2
Ccdc43Q9CR29 Gm37801-201ENSMUST00000194754 274 ntBASIC1.33□□□□□ -2.2
Ccdc43Q9CR29 Gm43602-201ENSMUST00000196772 300 ntBASIC1.33□□□□□ -2.2
Ccdc43Q9CR29 CT010449.1-201ENSMUST00000220624 153 ntBASIC1.33□□□□□ -2.2
Ccdc43Q9CR29 Gm25929-201ENSMUST00000082784 107 ntBASIC1.33□□□□□ -2.2
Ccdc43Q9CR29 Gm42862-201ENSMUST00000197494 2621 ntBASIC1.33□□□□□ -2.2
Ccdc43Q9CR29 AC153950.1-201ENSMUST00000219916 3238 ntBASIC1.32□□□□□ -2.2
Ccdc43Q9CR29 Gm22598-201ENSMUST00000157600 127 ntBASIC1.32□□□□□ -2.2
Ccdc43Q9CR29 Gm24504-201ENSMUST00000157679 100 ntBASIC1.32□□□□□ -2.2
Ccdc43Q9CR29 Gm22403-201ENSMUST00000174919 84 ntBASIC1.32□□□□□ -2.2
Ccdc43Q9CR29 Gm23355-201ENSMUST00000177614 107 ntBASIC1.32□□□□□ -2.2
Ccdc43Q9CR29 Gm23148-201ENSMUST00000180367 107 ntBASIC1.32□□□□□ -2.2
Ccdc43Q9CR29 Gm26914-201ENSMUST00000182262 223 ntBASIC1.32□□□□□ -2.2
Ccdc43Q9CR29 Mir7063-201ENSMUST00000184158 91 ntBASIC1.32□□□□□ -2.2
Ccdc43Q9CR29 Mir7093-201ENSMUST00000184195 101 ntBASIC1.32□□□□□ -2.2
Ccdc43Q9CR29 Gm28408-201ENSMUST00000191557 463 ntBASIC1.32□□□□□ -2.2
Ccdc43Q9CR29 Gm44473-201ENSMUST00000204039 152 ntBASIC1.32□□□□□ -2.2
Ccdc43Q9CR29 Gm25258-201ENSMUST00000083049 107 ntBASIC1.32□□□□□ -2.2
Ccdc43Q9CR29 Gm24043-201ENSMUST00000083108 116 ntBASIC1.32□□□□□ -2.2
Ccdc43Q9CR29 Gm25663-201ENSMUST00000157698 135 ntBASIC1.31□□□□□ -2.2
Ccdc43Q9CR29 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
Ccdc43Q9CR29 Gm27540-201ENSMUST00000184950 187 ntBASIC1.31□□□□□ -2.2
Ccdc43Q9CR29 Gm28661-201ENSMUST00000188231 681 ntBASIC1.31□□□□□ -2.2
Ccdc43Q9CR29 Gm34783-201ENSMUST00000209159 303 ntBASIC1.31□□□□□ -2.2
Ccdc43Q9CR29 Rny3-201ENSMUST00000083011 102 ntBASIC1.31□□□□□ -2.2
Ccdc43Q9CR29 Gm23851-201ENSMUST00000083831 103 ntBASIC1.31□□□□□ -2.2
Ccdc43Q9CR29 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
Ccdc43Q9CR29 Gm11008-201ENSMUST00000109032 622 ntTSL 5 BASIC1.3□□□□□ -2.2
Ccdc43Q9CR29 Gm22709-201ENSMUST00000116893 111 ntBASIC1.3□□□□□ -2.2
Ccdc43Q9CR29 Gm12512-201ENSMUST00000119620 217 ntBASIC1.3□□□□□ -2.2
Ccdc43Q9CR29 Gm23083-201ENSMUST00000157851 116 ntBASIC1.3□□□□□ -2.2
Ccdc43Q9CR29 Gm25982-201ENSMUST00000157920 101 ntBASIC1.3□□□□□ -2.2
Ccdc43Q9CR29 Gm24211-201ENSMUST00000158264 107 ntBASIC1.3□□□□□ -2.2
Ccdc43Q9CR29 Gm22011-201ENSMUST00000158790 123 ntBASIC1.3□□□□□ -2.2
Ccdc43Q9CR29 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC1.3□□□□□ -2.2
Ccdc43Q9CR29 Gm43199-201ENSMUST00000200019 307 ntBASIC1.3□□□□□ -2.2
Ccdc43Q9CR29 AC164612.2-202ENSMUST00000216314 253 ntBASIC1.3□□□□□ -2.2
Ccdc43Q9CR29 Gm22980-201ENSMUST00000082608 70 ntBASIC1.3□□□□□ -2.2
Ccdc43Q9CR29 Gm22294-201ENSMUST00000083308 104 ntBASIC1.3□□□□□ -2.2
Ccdc43Q9CR29 BC022960-201ENSMUST00000119987 1815 ntBASIC1.3□□□□□ -2.2
Ccdc43Q9CR29 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC1.3□□□□□ -2.2
Ccdc43Q9CR29 Olfr188-ps1-201ENSMUST00000205766 4706 ntTSL 5 BASIC1.29□□□□□ -2.2
Ccdc43Q9CR29 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
Ccdc43Q9CR29 Gm22215-201ENSMUST00000157558 96 ntBASIC1.29□□□□□ -2.2
Ccdc43Q9CR29 Gm22945-201ENSMUST00000158557 157 ntBASIC1.29□□□□□ -2.2
Ccdc43Q9CR29 Gm26213-201ENSMUST00000158582 110 ntBASIC1.29□□□□□ -2.2
Ccdc43Q9CR29 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC1.29□□□□□ -2.2
Ccdc43Q9CR29 Gm7958-201ENSMUST00000178255 468 ntBASIC1.29□□□□□ -2.2
Ccdc43Q9CR29 Gm7950-201ENSMUST00000179633 468 ntBASIC1.29□□□□□ -2.2
Ccdc43Q9CR29 Gm26224-201ENSMUST00000082506 80 ntBASIC1.29□□□□□ -2.2
Ccdc43Q9CR29 Gm26135-201ENSMUST00000101993 72 ntBASIC1.28□□□□□ -2.2
Ccdc43Q9CR29 Gm14301-201ENSMUST00000120181 324 ntBASIC1.28□□□□□ -2.2
Ccdc43Q9CR29 Gm14846-201ENSMUST00000121868 216 ntBASIC1.28□□□□□ -2.2
Ccdc43Q9CR29 n-R5s188-201ENSMUST00000122646 105 ntBASIC1.28□□□□□ -2.2
Ccdc43Q9CR29 Mir3471-1-201ENSMUST00000175139 131 ntBASIC1.28□□□□□ -2.2
Ccdc43Q9CR29 Snord50b-201ENSMUST00000178497 72 ntBASIC1.28□□□□□ -2.2
Ccdc43Q9CR29 Gm42855-201ENSMUST00000197388 253 ntBASIC1.28□□□□□ -2.2
Ccdc43Q9CR29 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC1.28□□□□□ -2.2
Ccdc43Q9CR29 AC173482.5-201ENSMUST00000224181 327 ntBASIC1.28□□□□□ -2.2
Ccdc43Q9CR29 Gm25128-201ENSMUST00000083339 76 ntBASIC1.28□□□□□ -2.2
Ccdc43Q9CR29 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
Ccdc43Q9CR29 Gm22545-201ENSMUST00000104350 132 ntBASIC1.27□□□□□ -2.21
Ccdc43Q9CR29 Gm23705-201ENSMUST00000104370 130 ntBASIC1.27□□□□□ -2.21
Ccdc43Q9CR29 Gm13518-201ENSMUST00000120018 233 ntBASIC1.27□□□□□ -2.21
Ccdc43Q9CR29 Gm12785-201ENSMUST00000122052 172 ntBASIC1.27□□□□□ -2.21
Ccdc43Q9CR29 Gm23106-201ENSMUST00000157554 101 ntBASIC1.27□□□□□ -2.21
Ccdc43Q9CR29 Gm24808-201ENSMUST00000157993 118 ntBASIC1.27□□□□□ -2.21
Ccdc43Q9CR29 Gm10772-201ENSMUST00000167981 255 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
Ccdc43Q9CR29 Mir3098-201ENSMUST00000175416 87 ntBASIC1.27□□□□□ -2.21
Ccdc43Q9CR29 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
Ccdc43Q9CR29 Gm23793-201ENSMUST00000179396 117 ntBASIC1.27□□□□□ -2.21
Ccdc43Q9CR29 Scgb1b6-ps-201ENSMUST00000185337 199 ntBASIC1.27□□□□□ -2.21
Ccdc43Q9CR29 Gm29242-201ENSMUST00000186570 457 ntTSL 5 BASIC1.27□□□□□ -2.21
Ccdc43Q9CR29 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC1.27□□□□□ -2.21
Ccdc43Q9CR29 Gm36946-201ENSMUST00000192706 435 ntBASIC1.27□□□□□ -2.21
Ccdc43Q9CR29 Gm44325-201ENSMUST00000196757 77 ntBASIC1.27□□□□□ -2.21
Ccdc43Q9CR29 Olfr1070-ps1-201ENSMUST00000215939 388 ntBASIC1.27□□□□□ -2.21
Ccdc43Q9CR29 Snora41-201ENSMUST00000082668 132 ntBASIC1.27□□□□□ -2.21
Ccdc43Q9CR29 Gm24116-201ENSMUST00000103975 107 ntBASIC1.26□□□□□ -2.21
Ccdc43Q9CR29 Gm14980-201ENSMUST00000121247 736 ntBASIC1.26□□□□□ -2.21
Ccdc43Q9CR29 Gm22233-201ENSMUST00000157464 114 ntBASIC1.26□□□□□ -2.21
Ccdc43Q9CR29 Gm22551-201ENSMUST00000157795 103 ntBASIC1.26□□□□□ -2.21
Ccdc43Q9CR29 Gm25868-201ENSMUST00000158253 114 ntBASIC1.26□□□□□ -2.21
Ccdc43Q9CR29 Mir8090-201ENSMUST00000185078 136 ntBASIC1.26□□□□□ -2.21
Ccdc43Q9CR29 Gm42891-201ENSMUST00000199340 281 ntTSL 5 BASIC1.26□□□□□ -2.21
Ccdc43Q9CR29 AC157476.1-201ENSMUST00000215555 169 ntBASIC1.26□□□□□ -2.21
Ccdc43Q9CR29 CT954323.1-201ENSMUST00000222774 229 ntBASIC1.26□□□□□ -2.21
Ccdc43Q9CR29 Gm25078-201ENSMUST00000082530 107 ntBASIC1.26□□□□□ -2.21
Ccdc43Q9CR29 Gm25930-201ENSMUST00000082785 107 ntBASIC1.26□□□□□ -2.21
Retrieved 100 of 76,532 protein–RNA pairs in 175.3 ms