Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Mir22-201ENSMUST00000083595 95 ntBASIC0.77□□□□□ -2.29
RTRAFQ9CQE8 Gm26107-201ENSMUST00000083972 107 ntBASIC0.77□□□□□ -2.29
RTRAFQ9CQE8 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC0.76□□□□□ -2.29
RTRAFQ9CQE8 Gm23010-201ENSMUST00000104151 126 ntBASIC0.76□□□□□ -2.29
RTRAFQ9CQE8 Gm25773-201ENSMUST00000116718 127 ntBASIC0.76□□□□□ -2.29
RTRAFQ9CQE8 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC0.76□□□□□ -2.29
RTRAFQ9CQE8 Gm26004-201ENSMUST00000158804 116 ntBASIC0.76□□□□□ -2.29
RTRAFQ9CQE8 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC0.76□□□□□ -2.29
RTRAFQ9CQE8 Gm28927-201ENSMUST00000191528 272 ntBASIC0.76□□□□□ -2.29
RTRAFQ9CQE8 Gm37713-201ENSMUST00000191746 198 ntBASIC0.76□□□□□ -2.29
RTRAFQ9CQE8 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC0.76□□□□□ -2.29
RTRAFQ9CQE8 Igkv4-65-201ENSMUST00000196986 358 ntBASIC0.76□□□□□ -2.29
RTRAFQ9CQE8 Gm43472-201ENSMUST00000200175 154 ntBASIC0.76□□□□□ -2.29
RTRAFQ9CQE8 AC130829.3-201ENSMUST00000222735 154 ntBASIC0.76□□□□□ -2.29
RTRAFQ9CQE8 AC173482.5-201ENSMUST00000224181 327 ntBASIC0.76□□□□□ -2.29
RTRAFQ9CQE8 Mir219a-2-201ENSMUST00000083551 97 ntBASIC0.76□□□□□ -2.29
RTRAFQ9CQE8 Gm26329-201ENSMUST00000093723 110 ntBASIC0.76□□□□□ -2.29
RTRAFQ9CQE8 Olfr136-205ENSMUST00000216963 1821 ntAPPRIS P1 TSL 5 BASIC0.75□□□□□ -2.29
RTRAFQ9CQE8 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC0.75□□□□□ -2.29
RTRAFQ9CQE8 Gm21897-201ENSMUST00000178312 1500 ntAPPRIS P1 BASIC0.75□□□□□ -2.29
RTRAFQ9CQE8 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC0.75□□□□□ -2.29
RTRAFQ9CQE8 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC0.75□□□□□ -2.29
RTRAFQ9CQE8 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC0.75□□□□□ -2.29
RTRAFQ9CQE8 Gm22544-201ENSMUST00000104349 127 ntBASIC0.75□□□□□ -2.29
RTRAFQ9CQE8 Mup-ps22-201ENSMUST00000121611 243 ntBASIC0.75□□□□□ -2.29
RTRAFQ9CQE8 Gm25392-201ENSMUST00000157335 297 ntBASIC0.75□□□□□ -2.29
RTRAFQ9CQE8 Gm22233-201ENSMUST00000157464 114 ntBASIC0.75□□□□□ -2.29
RTRAFQ9CQE8 Gm22215-201ENSMUST00000157558 96 ntBASIC0.75□□□□□ -2.29
RTRAFQ9CQE8 Gm25868-201ENSMUST00000158253 114 ntBASIC0.75□□□□□ -2.29
RTRAFQ9CQE8 Mir376a-201ENSMUST00000197584 68 ntBASIC0.75□□□□□ -2.29
RTRAFQ9CQE8 AC153526.1-201ENSMUST00000219750 190 ntBASIC0.75□□□□□ -2.29
RTRAFQ9CQE8 AC160115.1-201ENSMUST00000224678 1574 ntBASIC0.74□□□□□ -2.29
RTRAFQ9CQE8 Mir301b-201ENSMUST00000102333 97 ntBASIC0.74□□□□□ -2.29
RTRAFQ9CQE8 Gm22689-201ENSMUST00000102452 110 ntBASIC0.74□□□□□ -2.29
RTRAFQ9CQE8 Gm26074-201ENSMUST00000104063 129 ntBASIC0.74□□□□□ -2.29
RTRAFQ9CQE8 Gm24283-201ENSMUST00000104233 107 ntBASIC0.74□□□□□ -2.29
RTRAFQ9CQE8 Gm11334-201ENSMUST00000121969 156 ntBASIC0.74□□□□□ -2.29
RTRAFQ9CQE8 Gm25781-201ENSMUST00000122527 84 ntBASIC0.74□□□□□ -2.29
RTRAFQ9CQE8 Gm23759-201ENSMUST00000158351 268 ntBASIC0.74□□□□□ -2.29
RTRAFQ9CQE8 Gm26029-201ENSMUST00000158659 132 ntBASIC0.74□□□□□ -2.29
RTRAFQ9CQE8 Gm26400-201ENSMUST00000175012 85 ntBASIC0.74□□□□□ -2.29
RTRAFQ9CQE8 Selenok-ps4-201ENSMUST00000178835 277 ntBASIC0.74□□□□□ -2.29
RTRAFQ9CQE8 Il6st-202ENSMUST00000183513 201 ntTSL 5 BASIC0.74□□□□□ -2.29
RTRAFQ9CQE8 Gm27317-201ENSMUST00000183533 95 ntBASIC0.74□□□□□ -2.29
RTRAFQ9CQE8 Gm27540-201ENSMUST00000184950 187 ntBASIC0.74□□□□□ -2.29
RTRAFQ9CQE8 Gm38323-201ENSMUST00000192450 210 ntBASIC0.74□□□□□ -2.29
RTRAFQ9CQE8 Gm44301-201ENSMUST00000200362 143 ntBASIC0.74□□□□□ -2.29
RTRAFQ9CQE8 Gm44149-201ENSMUST00000204256 226 ntBASIC0.74□□□□□ -2.29
RTRAFQ9CQE8 Gm43898-201ENSMUST00000204456 424 ntBASIC0.74□□□□□ -2.29
RTRAFQ9CQE8 CT954323.1-201ENSMUST00000222774 229 ntBASIC0.74□□□□□ -2.29
RTRAFQ9CQE8 n-R5s67-201ENSMUST00000104336 114 ntBASIC0.73□□□□□ -2.29
RTRAFQ9CQE8 Gm11060-201ENSMUST00000111107 72 ntAPPRIS P1 TSL 5 BASIC0.73□□□□□ -2.29
RTRAFQ9CQE8 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC0.73□□□□□ -2.29
RTRAFQ9CQE8 Vma21-ps-201ENSMUST00000114578 306 ntAPPRIS P1 BASIC0.73□□□□□ -2.29
RTRAFQ9CQE8 Gm11794-201ENSMUST00000119446 237 ntBASIC0.73□□□□□ -2.29
RTRAFQ9CQE8 Gm25970-201ENSMUST00000157165 86 ntBASIC0.73□□□□□ -2.29
RTRAFQ9CQE8 Gm25750-201ENSMUST00000175483 112 ntBASIC0.73□□□□□ -2.29
RTRAFQ9CQE8 Gm22802-201ENSMUST00000175621 89 ntBASIC0.73□□□□□ -2.29
RTRAFQ9CQE8 Gm23355-201ENSMUST00000177614 107 ntBASIC0.73□□□□□ -2.29
RTRAFQ9CQE8 Gm23148-201ENSMUST00000180367 107 ntBASIC0.73□□□□□ -2.29
RTRAFQ9CQE8 Mir7026-201ENSMUST00000184384 67 ntBASIC0.73□□□□□ -2.29
RTRAFQ9CQE8 Gm28661-201ENSMUST00000188231 681 ntBASIC0.73□□□□□ -2.29
RTRAFQ9CQE8 Gm29022-201ENSMUST00000190702 225 ntBASIC0.73□□□□□ -2.29
RTRAFQ9CQE8 Gm19777-201ENSMUST00000191940 358 ntBASIC0.73□□□□□ -2.29
RTRAFQ9CQE8 Gm44358-201ENSMUST00000196301 98 ntBASIC0.73□□□□□ -2.29
RTRAFQ9CQE8 Gm25820-202ENSMUST00000197479 128 ntBASIC0.73□□□□□ -2.29
RTRAFQ9CQE8 Gm44473-201ENSMUST00000204039 152 ntBASIC0.73□□□□□ -2.29
RTRAFQ9CQE8 Gm45543-201ENSMUST00000209327 88 ntBASIC0.73□□□□□ -2.29
RTRAFQ9CQE8 Gm25078-201ENSMUST00000082530 107 ntBASIC0.73□□□□□ -2.29
RTRAFQ9CQE8 Gm25929-201ENSMUST00000082784 107 ntBASIC0.73□□□□□ -2.29
RTRAFQ9CQE8 Gm25258-201ENSMUST00000083049 107 ntBASIC0.73□□□□□ -2.29
RTRAFQ9CQE8 Gm43877-201ENSMUST00000205029 2238 ntBASIC0.72□□□□□ -2.29
RTRAFQ9CQE8 Gm11572-201ENSMUST00000119164 120 ntBASIC0.72□□□□□ -2.29
RTRAFQ9CQE8 Gm13588-201ENSMUST00000120026 135 ntBASIC0.72□□□□□ -2.29
RTRAFQ9CQE8 n-R5s157-201ENSMUST00000122543 121 ntBASIC0.72□□□□□ -2.29
RTRAFQ9CQE8 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC0.72□□□□□ -2.29
RTRAFQ9CQE8 Gm22945-201ENSMUST00000158557 157 ntBASIC0.72□□□□□ -2.29
RTRAFQ9CQE8 Gm27974-201ENSMUST00000183415 105 ntBASIC0.72□□□□□ -2.29
RTRAFQ9CQE8 Gm28288-201ENSMUST00000191019 214 ntBASIC0.72□□□□□ -2.29
RTRAFQ9CQE8 AC157476.1-201ENSMUST00000215555 169 ntBASIC0.72□□□□□ -2.29
RTRAFQ9CQE8 Gm18617-201ENSMUST00000222311 259 ntBASIC0.72□□□□□ -2.29
RTRAFQ9CQE8 AC159619.2-201ENSMUST00000222924 401 ntBASIC0.72□□□□□ -2.29
RTRAFQ9CQE8 Gm9795-201ENSMUST00000062156 693 ntBASIC0.72□□□□□ -2.29
RTRAFQ9CQE8 Gm24042-201ENSMUST00000083114 103 ntBASIC0.72□□□□□ -2.29
RTRAFQ9CQE8 Gm23851-201ENSMUST00000083831 103 ntBASIC0.72□□□□□ -2.29
RTRAFQ9CQE8 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC0.72□□□□□ -2.29
RTRAFQ9CQE8 Olfr1154-202ENSMUST00000215017 2917 ntAPPRIS P1 TSL 5 BASIC0.71□□□□□ -2.29
RTRAFQ9CQE8 Gm42606-201ENSMUST00000114209 239 ntBASIC0.71□□□□□ -2.3
RTRAFQ9CQE8 Gm12785-201ENSMUST00000122052 172 ntBASIC0.71□□□□□ -2.3
RTRAFQ9CQE8 Gm25544-201ENSMUST00000122676 120 ntBASIC0.71□□□□□ -2.3
RTRAFQ9CQE8 Gm25827-201ENSMUST00000157089 107 ntBASIC0.71□□□□□ -2.3
RTRAFQ9CQE8 Gm23893-201ENSMUST00000158106 134 ntBASIC0.71□□□□□ -2.3
RTRAFQ9CQE8 Ccdc152-201ENSMUST00000165386 798 ntAPPRIS P1 TSL 5 BASIC0.71□□□□□ -2.3
RTRAFQ9CQE8 4930579O11Rik-202ENSMUST00000168243 672 ntTSL 3 BASIC0.71□□□□□ -2.3
RTRAFQ9CQE8 Gm25671-201ENSMUST00000178612 105 ntBASIC0.71□□□□□ -2.3
RTRAFQ9CQE8 Gm23307-201ENSMUST00000179167 105 ntBASIC0.71□□□□□ -2.3
RTRAFQ9CQE8 Gm25286-201ENSMUST00000179790 105 ntBASIC0.71□□□□□ -2.3
RTRAFQ9CQE8 Mir7093-201ENSMUST00000184195 101 ntBASIC0.71□□□□□ -2.3
RTRAFQ9CQE8 Gm29229-201ENSMUST00000188874 323 ntBASIC0.71□□□□□ -2.3
RTRAFQ9CQE8 Gm19123-201ENSMUST00000190716 651 ntBASIC0.71□□□□□ -2.3
Retrieved 100 of 76,532 protein–RNA pairs in 81.7 ms