Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Prol1-201ENSMUST00000170832 1163 ntAPPRIS P1 TSL 1 (best) BASIC-1.51□□□□□ -2.65
Cdh23Q99PF4 Gm12433-201ENSMUST00000119659 255 ntBASIC-1.51□□□□□ -2.65
Cdh23Q99PF4 Mir30c-2-201ENSMUST00000083633 84 ntBASIC-1.51□□□□□ -2.65
Cdh23Q99PF4 AC154506.4-201ENSMUST00000224898 3416 ntBASIC-1.52□□□□□ -2.65
Cdh23Q99PF4 Gm11792-201ENSMUST00000120640 168 ntBASIC-1.52□□□□□ -2.65
Cdh23Q99PF4 Gm26256-201ENSMUST00000122499 186 ntBASIC-1.52□□□□□ -2.65
Cdh23Q99PF4 n-R5s216-201ENSMUST00000122755 112 ntBASIC-1.52□□□□□ -2.65
Cdh23Q99PF4 Stfa3-201ENSMUST00000068182 412 ntAPPRIS P1 TSL 1 (best) BASIC-1.52□□□□□ -2.65
Cdh23Q99PF4 Gm26329-201ENSMUST00000093723 110 ntBASIC-1.52□□□□□ -2.65
Cdh23Q99PF4 AC122887.2-201ENSMUST00000219465 1603 ntBASIC-1.52□□□□□ -2.65
Cdh23Q99PF4 Gm25914-201ENSMUST00000157618 153 ntBASIC-1.52□□□□□ -2.65
Cdh23Q99PF4 Gm46367-202ENSMUST00000222771 501 ntTSL 5 BASIC-1.52□□□□□ -2.65
Cdh23Q99PF4 Mir702-201ENSMUST00000102285 109 ntBASIC-1.53□□□□□ -2.65
Cdh23Q99PF4 Gm24853-201ENSMUST00000158026 121 ntBASIC-1.53□□□□□ -2.65
Cdh23Q99PF4 Gm46103-201ENSMUST00000217614 341 ntBASIC-1.53□□□□□ -2.65
Cdh23Q99PF4 Mir297b-201ENSMUST00000102268 109 ntBASIC-1.53□□□□□ -2.65
Cdh23Q99PF4 Gm12370-201ENSMUST00000117809 604 ntBASIC-1.53□□□□□ -2.65
Cdh23Q99PF4 Vmn2r-ps121-201ENSMUST00000176230 802 ntBASIC-1.53□□□□□ -2.65
Cdh23Q99PF4 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC-1.53□□□□□ -2.65
Cdh23Q99PF4 Gm26415-201ENSMUST00000157673 292 ntBASIC-1.53□□□□□ -2.65
Cdh23Q99PF4 Gm44377-201ENSMUST00000199039 87 ntBASIC-1.53□□□□□ -2.65
Cdh23Q99PF4 Gm22809-201ENSMUST00000082743 156 ntBASIC-1.53□□□□□ -2.65
Cdh23Q99PF4 Gm14417-201ENSMUST00000120036 1074 ntBASIC-1.54□□□□□ -2.66
Cdh23Q99PF4 Gm15680-201ENSMUST00000161597 465 ntTSL 5 BASIC-1.54□□□□□ -2.66
Cdh23Q99PF4 Gm24925-201ENSMUST00000178157 107 ntBASIC-1.54□□□□□ -2.66
Cdh23Q99PF4 Gm19032-201ENSMUST00000208584 592 ntBASIC-1.54□□□□□ -2.66
Cdh23Q99PF4 AC160031.2-201ENSMUST00000218242 274 ntBASIC-1.54□□□□□ -2.66
Cdh23Q99PF4 Snord69-201ENSMUST00000104024 80 ntBASIC-1.54□□□□□ -2.66
Cdh23Q99PF4 Gm15309-201ENSMUST00000121644 240 ntBASIC-1.54□□□□□ -2.66
Cdh23Q99PF4 Gm43487-201ENSMUST00000200331 1031 ntBASIC-1.54□□□□□ -2.66
Cdh23Q99PF4 Gm10297-201ENSMUST00000207136 651 ntBASIC-1.54□□□□□ -2.66
Cdh23Q99PF4 Gm26314-201ENSMUST00000083891 107 ntBASIC-1.54□□□□□ -2.66
Cdh23Q99PF4 Gm23887-201ENSMUST00000122683 172 ntBASIC-1.55□□□□□ -2.66
Cdh23Q99PF4 Gm23024-201ENSMUST00000158770 292 ntBASIC-1.55□□□□□ -2.66
Cdh23Q99PF4 Gm25473-201ENSMUST00000180191 107 ntBASIC-1.55□□□□□ -2.66
Cdh23Q99PF4 Gm24977-201ENSMUST00000083106 163 ntBASIC-1.55□□□□□ -2.66
Cdh23Q99PF4 Mir543-201ENSMUST00000102286 76 ntBASIC-1.55□□□□□ -2.66
Cdh23Q99PF4 Gm23090-201ENSMUST00000177331 78 ntBASIC-1.55□□□□□ -2.66
Cdh23Q99PF4 Gm37624-201ENSMUST00000193751 219 ntBASIC-1.55□□□□□ -2.66
Cdh23Q99PF4 Gm23118-201ENSMUST00000122657 187 ntBASIC-1.56□□□□□ -2.66
Cdh23Q99PF4 Gm37720-201ENSMUST00000195497 1241 ntBASIC-1.56□□□□□ -2.66
Cdh23Q99PF4 Mir19b-1-201ENSMUST00000102301 87 ntBASIC-1.56□□□□□ -2.66
Cdh23Q99PF4 1810026B05Rik-201ENSMUST00000183916 432 ntTSL 3 BASIC-1.56□□□□□ -2.66
Cdh23Q99PF4 Gm24909-201ENSMUST00000157290 280 ntBASIC-1.57□□□□□ -2.66
Cdh23Q99PF4 Gm14626-201ENSMUST00000117619 216 ntBASIC-1.57□□□□□ -2.66
Cdh23Q99PF4 Gm22158-201ENSMUST00000158411 126 ntBASIC-1.57□□□□□ -2.66
Cdh23Q99PF4 Gm22527-201ENSMUST00000158816 106 ntBASIC-1.57□□□□□ -2.66
Cdh23Q99PF4 Sval2-202ENSMUST00000119995 463 ntTSL 3 BASIC-1.58□□□□□ -2.66
Cdh23Q99PF4 Gm22452-201ENSMUST00000122804 104 ntBASIC-1.58□□□□□ -2.66
Cdh23Q99PF4 CT572985.2-201ENSMUST00000220496 211 ntBASIC-1.58□□□□□ -2.66
Cdh23Q99PF4 Gm14671-201ENSMUST00000121790 262 ntBASIC-1.58□□□□□ -2.66
Cdh23Q99PF4 Gm25160-201ENSMUST00000158914 102 ntBASIC-1.58□□□□□ -2.66
Cdh23Q99PF4 BE692007-203ENSMUST00000189306 362 ntTSL 3 BASIC-1.58□□□□□ -2.66
Cdh23Q99PF4 AC154562.1-201ENSMUST00000226140 966 ntBASIC-1.58□□□□□ -2.66
Cdh23Q99PF4 Gm24460-201ENSMUST00000082731 106 ntBASIC-1.58□□□□□ -2.66
Cdh23Q99PF4 Mir6393-201ENSMUST00000183709 94 ntBASIC-1.58□□□□□ -2.66
Cdh23Q99PF4 Mir100-201ENSMUST00000175270 80 ntBASIC-1.59□□□□□ -2.66
Cdh23Q99PF4 Mir7j-201ENSMUST00000184427 122 ntBASIC-1.59□□□□□ -2.66
Cdh23Q99PF4 AC192334.2-201ENSMUST00000223087 1091 ntBASIC-1.59□□□□□ -2.66
Cdh23Q99PF4 Gm22401-201ENSMUST00000174927 117 ntBASIC-1.59□□□□□ -2.66
Cdh23Q99PF4 Gm29229-201ENSMUST00000188874 323 ntBASIC-1.59□□□□□ -2.66
Cdh23Q99PF4 Gm29140-201ENSMUST00000190187 476 ntBASIC-1.59□□□□□ -2.66
Cdh23Q99PF4 Gm24714-201ENSMUST00000102382 101 ntBASIC-1.6□□□□□ -2.67
Cdh23Q99PF4 Gm15529-201ENSMUST00000121833 994 ntBASIC-1.6□□□□□ -2.67
Cdh23Q99PF4 Gm25391-201ENSMUST00000157342 134 ntBASIC-1.6□□□□□ -2.67
Cdh23Q99PF4 Gm20415-201ENSMUST00000172877 423 ntBASIC-1.6□□□□□ -2.67
Cdh23Q99PF4 Gm25371-201ENSMUST00000158162 101 ntBASIC-1.61□□□□□ -2.67
Cdh23Q99PF4 Mir28b-201ENSMUST00000175399 80 ntBASIC-1.61□□□□□ -2.67
Cdh23Q99PF4 Gm23308-201ENSMUST00000179475 107 ntBASIC-1.61□□□□□ -2.67
Cdh23Q99PF4 Gm25417-201ENSMUST00000104212 131 ntBASIC-1.61□□□□□ -2.67
Cdh23Q99PF4 Gm24232-201ENSMUST00000104314 132 ntBASIC-1.61□□□□□ -2.67
Cdh23Q99PF4 Gm43472-201ENSMUST00000200175 154 ntBASIC-1.61□□□□□ -2.67
Cdh23Q99PF4 AC158981.3-202ENSMUST00000228906 523 ntBASIC-1.61□□□□□ -2.67
Cdh23Q99PF4 Gm23637-201ENSMUST00000175075 94 ntBASIC-1.61□□□□□ -2.67
Cdh23Q99PF4 Igkv13-82-201ENSMUST00000200308 346 ntBASIC-1.61□□□□□ -2.67
Cdh23Q99PF4 Olfr931-ps1-201ENSMUST00000214941 549 ntBASIC-1.62□□□□□ -2.67
Cdh23Q99PF4 Gm10217-201ENSMUST00000088080 135 ntAPPRIS P1 TSL 5 BASIC-1.62□□□□□ -2.67
Cdh23Q99PF4 Gm23854-201ENSMUST00000158378 108 ntBASIC-1.62□□□□□ -2.67
Cdh23Q99PF4 Mir7094-2-201ENSMUST00000184622 60 ntBASIC-1.62□□□□□ -2.67
Cdh23Q99PF4 Gm44491-201ENSMUST00000196794 96 ntBASIC-1.62□□□□□ -2.67
Cdh23Q99PF4 Mir7094-1-201ENSMUST00000199671 60 ntBASIC-1.62□□□□□ -2.67
Cdh23Q99PF4 Gm24233-201ENSMUST00000104317 122 ntBASIC-1.63□□□□□ -2.67
Cdh23Q99PF4 Mir208b-201ENSMUST00000104735 77 ntBASIC-1.63□□□□□ -2.67
Cdh23Q99PF4 Gm24500-201ENSMUST00000158447 124 ntBASIC-1.63□□□□□ -2.67
Cdh23Q99PF4 2310075C17Rik-201ENSMUST00000161216 326 ntTSL 1 (best) BASIC-1.63□□□□□ -2.67
Cdh23Q99PF4 Gm37918-201ENSMUST00000192071 120 ntBASIC-1.63□□□□□ -2.67
Cdh23Q99PF4 Gm42845-201ENSMUST00000197766 105 ntBASIC-1.63□□□□□ -2.67
Cdh23Q99PF4 Gm44391-201ENSMUST00000198490 93 ntBASIC-1.63□□□□□ -2.67
Cdh23Q99PF4 Gm22541-201ENSMUST00000158165 127 ntBASIC-1.63□□□□□ -2.67
Cdh23Q99PF4 Ear-ps8-201ENSMUST00000161935 354 ntBASIC-1.63□□□□□ -2.67
Cdh23Q99PF4 Gm25622-201ENSMUST00000157217 104 ntBASIC-1.64□□□□□ -2.67
Cdh23Q99PF4 Vmn1r-ps23-201ENSMUST00000175708 295 ntBASIC-1.64□□□□□ -2.67
Cdh23Q99PF4 Gm25626-201ENSMUST00000177631 107 ntBASIC-1.64□□□□□ -2.67
Cdh23Q99PF4 AC153522.1-201ENSMUST00000220047 1090 ntBASIC-1.64□□□□□ -2.67
Cdh23Q99PF4 AC167977.1-201ENSMUST00000221384 234 ntBASIC-1.64□□□□□ -2.67
Cdh23Q99PF4 AC134254.5-201ENSMUST00000223436 400 ntBASIC-1.64□□□□□ -2.67
Cdh23Q99PF4 Gm22105-201ENSMUST00000116734 116 ntBASIC-1.64□□□□□ -2.67
Cdh23Q99PF4 Gm11367-201ENSMUST00000117802 120 ntBASIC-1.64□□□□□ -2.67
Cdh23Q99PF4 Vmn1r224-201ENSMUST00000170076 897 ntAPPRIS P1 BASIC-1.64□□□□□ -2.67
Cdh23Q99PF4 Vmn2r-ps16-201ENSMUST00000178737 377 ntBASIC-1.64□□□□□ -2.67
Retrieved 100 of 76,532 protein–RNA pairs in 88 ms